RNA–Protein interactions for RNA: ENST00000397172.7

APTX-207, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,740 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-207ENST00000397172 COMMD3-BMI1R4GMX3 469 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 COL4A5P29400 1685 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 POTEFA5A3E0 1075 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 GPAA1O43292 621 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 NCK2O43639 380 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 PALMO75781 387 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 RHOBTB3O94955 611 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 GJB6O95452 261 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 SERPING1P05155 500 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 KRT16P08779 473 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 POTEIP0CG38 1075 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 POTEJP0CG39 1038 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 VHLP40337 213 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 ERVK-9P63128 1117 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 ATP2C1P98194 919 aaPredicted RBP10.7□□□□□ -0.7
APTX-207ENST00000397172 ACVR2BQ13705 512 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 TNIP1Q15025 636 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 CCDC6Q16204 474 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 DOK7Q18PE1 504 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 VWA3BQ502W6 1294 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 TTC38Q5R3I4 469 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 C1QTNF12Q5T7M4 302 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 RNF43Q68DV7 783 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 POTEEQ6S8J3 1075 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 CEP128Q6ZU80 1094 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 MYLK4Q86YV6 388 aaPredicted RBP10.7□□□□□ -0.7
APTX-207ENST00000397172 IRF2BP1Q8IU81 584 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 TRIM42Q8IWZ5 723 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 SYCE1Q8N0S2 351 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 IGDCC4Q8TDY8 1250 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 SCFD2Q8WU76 684 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 P2RX5Q93086 422 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 MS4A14Q96JA4 679 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 MAML3Q96JK9 1138 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 CNOT6LQ96LI5 555 aaKnown RBP10.7□□□□□ -0.7
APTX-207ENST00000397172 FMO2Q99518 471 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.7□□□□□ -0.73e-6■■□□□ 12.8
APTX-207ENST00000397172 TMEM109Q9BVC6 243 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 TIPINQ9BVW5 301 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 BLZF1Q9H2G9 400 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 DCLRE1BQ9H816 532 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 DBNDD1Q9H9R9 158 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 POLD4Q9HCU8 107 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 DNAAF2Q9NVR5 837 aaKnown RBP10.7□□□□□ -0.7
APTX-207ENST00000397172 DLGAP2Q9P1A6 1054 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 NDUFB9Q9Y6M9 179 aa10.7□□□□□ -0.7
APTX-207ENST00000397172 ATP8B3O60423 1300 aa10.69□□□□□ -0.7
APTX-207ENST00000397172 YDJCA8MPS7 323 aa10.69□□□□□ -0.7
APTX-207ENST00000397172 BHMG1C9JSJ3 638 aaPredicted RBP10.69□□□□□ -0.7
APTX-207ENST00000397172 ZNF263O14978 683 aa10.69□□□□□ -0.7
APTX-207ENST00000397172 CETN3O15182 167 aa10.69□□□□□ -0.7
APTX-207ENST00000397172 NVLO15381 856 aaKnown RBP10.69□□□□□ -0.7
APTX-207ENST00000397172 UNC5CO95185 931 aa10.69□□□□□ -0.7
APTX-207ENST00000397172 OAS1P00973 400 aaKnown RBP10.69□□□□□ -0.7
APTX-207ENST00000397172 GYG1P46976 350 aa10.69□□□□□ -0.7
APTX-207ENST00000397172 PSMD7P51665 324 aa10.69□□□□□ -0.7
APTX-207ENST00000397172 AMPD3Q01432 767 aa10.69□□□□□ -0.7
APTX-207ENST00000397172 DEUP1Q05D60 604 aa10.69□□□□□ -0.7
APTX-207ENST00000397172 SPDYAQ5MJ70 313 aa10.69□□□□□ -0.7
APTX-207ENST00000397172 USP49Q70CQ1 688 aa10.69□□□□□ -0.7
APTX-207ENST00000397172 CRACR2BQ8N4Y2 399 aaPredicted RBP10.69□□□□□ -0.7
APTX-207ENST00000397172 GIMAP8Q8ND71 665 aaPredicted RBP10.69□□□□□ -0.7
APTX-207ENST00000397172 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.69□□□□□ -0.7
APTX-207ENST00000397172 ASAP3Q8TDY4 903 aa10.69□□□□□ -0.7
APTX-207ENST00000397172 PTPRN2Q92932 1015 aa10.69□□□□□ -0.7
APTX-207ENST00000397172 GFM2Q969S9 779 aaKnown RBP10.69□□□□□ -0.7
APTX-207ENST00000397172 RUNDC3BQ96NL0 473 aa10.69□□□□□ -0.7
APTX-207ENST00000397172 NR1H4Q96RI1 486 aaPredicted RBP10.69□□□□□ -0.7
APTX-207ENST00000397172 ROPN1BQ9BZX4 212 aaPredicted RBP10.69□□□□□ -0.7
APTX-207ENST00000397172 ZMYND12Q9H0C1 365 aa10.69□□□□□ -0.7
APTX-207ENST00000397172 PABPC3Q9H361 631 aaKnown RBP10.69□□□□□ -0.7
APTX-207ENST00000397172 ROPN1Q9HAT0 212 aaPredicted RBP10.69□□□□□ -0.7
APTX-207ENST00000397172 ARHGAP20Q9P2F6 1191 aa10.69□□□□□ -0.7
APTX-207ENST00000397172 MTRF1LQ9UGC7 380 aaKnown RBP10.69□□□□□ -0.7
APTX-207ENST00000397172 KCNJ14Q9UNX9 436 aa10.69□□□□□ -0.7
APTX-207ENST00000397172 ARAP2Q8WZ64 1704 aa10.69□□□□□ -0.7
APTX-207ENST00000397172 ECM29Q5VYK3 1845 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 MROH7Q68CQ1 1323 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 A0A087X0B3 334 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 USP17L3A6NCW0 530 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 USP17L4A6NCW7 530 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 FAM187AA6NFU0 413 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 GLTPD2A6NH11 291 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 CEP104O60308 925 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 PDHA1P08559 390 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 ANXA13P27216 316 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 BCAMP50895 628 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 FKBP1AP62942 108 aaKnown RBP10.68□□□□□ -0.7
APTX-207ENST00000397172 CXCL9Q07325 125 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 WTAPQ15007 396 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 ALX1Q15699 326 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 COBLL1Q53SF7 1204 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 TDRD12Q587J7 1177 aaKnown RBP10.68□□□□□ -0.7
APTX-207ENST00000397172 RBM26Q5T8P6 1007 aaKnown RBP10.68□□□□□ -0.7
APTX-207ENST00000397172 STRIP1Q5VSL9 837 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 SFMBT2Q5VUG0 894 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 CIAPIN1Q6FI81 312 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 TTI2Q6NXR4 508 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 USP17L1Q7RTZ2 530 aa10.68□□□□□ -0.7
APTX-207ENST00000397172 KRT26Q7Z3Y9 468 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms