RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 ZBTB48P10074 688 aaPredicted RBP9.93□□□□□ -0.82
CAPN3-206ENST00000397163 CYP11B2P19099 503 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 RPS6KA3P51812 740 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 RWDD2BP57060 319 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 DR1Q01658 176 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 GRIK5Q16478 980 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 GJB7Q6PEY0 223 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 UHMK1Q8TAS1 419 aaKnown RBP9.93□□□□□ -0.82
CAPN3-206ENST00000397163 CENPTQ96BT3 561 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 ELAC2Q9BQ52 826 aaKnown RBP9.93□□□□□ -0.82
CAPN3-206ENST00000397163 CCDC113Q9H0I3 377 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 RIOX1Q9H6W3 641 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 INTS9Q9NV88 658 aaKnown RBP9.93□□□□□ -0.82
CAPN3-206ENST00000397163 DAAM1Q9Y4D1 1078 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 A0A1B0GVG6 124 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 CCDC169A6NNP5 214 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 hCG_1984214I3L0E3 225 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 DDX3XO00571 662 aaKnown RBP eCLIP9.93□□□□□ -0.82
CAPN3-206ENST00000397163 GFPT2O94808 682 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 PECAM1P16284 738 aaPredicted RBP9.93□□□□□ -0.82
CAPN3-206ENST00000397163 SSR1P43307 286 aaKnown RBP9.93□□□□□ -0.82
CAPN3-206ENST00000397163 PMS2P54278 862 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 GALCP54803 685 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 EIF6P56537 245 aaKnown RBP9.93□□□□□ -0.82
CAPN3-206ENST00000397163 ERICH1Q86X53 443 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 LRRC34Q8IZ02 419 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 LRRC47Q8N1G4 583 aaKnown RBP9.93□□□□□ -0.82
CAPN3-206ENST00000397163 ZNF713Q8N859 430 aaPredicted RBP9.93□□□□□ -0.82
CAPN3-206ENST00000397163 ATP8B4Q8TF62 1192 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 SEC14L1Q92503 715 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 GLG1Q92896 1179 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 AZI2Q9H6S1 392 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 PIDD1Q9HB75 910 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 OSGEPQ9NPF4 335 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 SNX24Q9Y343 169 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 KIAA1551Q9HCM1 1747 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 LAMB1P07942 1786 aa9.93□□□□□ -0.82
CAPN3-206ENST00000397163 LDHCP07864 332 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 LINGO3P0C6S8 592 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 ABCB4P21439 1286 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 PRKCIP41743 596 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 IFNAR2P48551 515 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 CASP5P51878 434 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 CLEC4GQ6UXB4 293 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 C16orf86Q6ZW13 317 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 FRMD5Q7Z6J6 570 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 HES6Q96HZ4 224 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 ZNF317Q96PQ6 595 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-206ENST00000397163 EBF2Q9HAK2 575 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 CD2APQ9Y5K6 639 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 A0A0A6YYK5 440 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-206ENST00000397163 KRT13P13646 458 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 ZNF211Q13398 564 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-206ENST00000397163 ERP44Q9BS26 406 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 PABPC3Q9H361 631 aaKnown RBP9.92□□□□□ -0.82
CAPN3-206ENST00000397163 GCNT4Q9P109 453 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 ANKIB1Q9P2G1 1089 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 AJAP1Q9UKB5 411 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-206ENST00000397163 AGAP1Q9UPQ3 857 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 ANKRD33BA6NCL7 494 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 ASAP2O43150 1006 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 EVI5O60447 810 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 GNAT1P11488 350 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 ABL2P42684 1182 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 BTDP43251 543 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 PTENP60484 403 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 PPP4CP60510 307 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 IFI35P80217 286 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-206ENST00000397163 POU5F1Q01860 360 aaKnown RBP9.92□□□□□ -0.82
CAPN3-206ENST00000397163 ITIH4Q14624 930 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 KNOP1Q1ED39 458 aaKnown RBP9.92□□□□□ -0.82
CAPN3-206ENST00000397163 CTNNBL1Q8WYA6 563 aaPredicted RBP9.92□□□□□ -0.82
CAPN3-206ENST00000397163 PRMT1Q99873 361 aaKnown RBP9.92□□□□□ -0.82
CAPN3-206ENST00000397163 OSBPL1AQ9BXW6 950 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 MTFR1LQ9H019 292 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 SEPT11Q9NVA2 429 aaKnown RBP9.92□□□□□ -0.82
CAPN3-206ENST00000397163 PPP1R9AQ9ULJ8 1098 aa9.92□□□□□ -0.82
CAPN3-206ENST00000397163 SCN7AQ01118 1682 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 TAF1P21675 1872 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 CALUO43852 315 aaPredicted RBP9.91□□□□□ -0.82
CAPN3-206ENST00000397163 GSTA1P08263 222 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 PDHA1P08559 390 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 FERP16591 822 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 ANXA13P27216 316 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 STAT3P40763 770 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 STAT1P42224 750 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 SLCO1A2P46721 670 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 NPEPPSP55786 919 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 USP4Q13107 963 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 SLC29A2Q14542 456 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 EPHA7Q15375 998 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 DPY19L2P1Q6NXN4 242 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 TRPM8Q7Z2W7 1104 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 GLYCTKQ8IVS8 523 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 ZC3H3Q8IXZ2 948 aaKnown RBP9.91□□□□□ -0.82
CAPN3-206ENST00000397163 SLC35G2Q8TBE7 412 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 FBXO25Q8TCJ0 367 aa9.91□□□□□ -0.82
CAPN3-206ENST00000397163 ATXN2LQ8WWM7 1075 aaKnown RBP9.91□□□□□ -0.82
CAPN3-206ENST00000397163 NAP1L3Q99457 506 aaPredicted RBP9.91□□□□□ -0.82
CAPN3-206ENST00000397163 TXLNGYQ9BZA5 131 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms