RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 TSC22D4Q9Y3Q8 395 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 SOS2Q07890 1332 aaPredicted RBP13.14□□□□□ -0.31
SMU1-201ENST00000397149 BTDP43251 543 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 NCALDP61601 193 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 LUZP2Q86TE4 346 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 SIX5Q8N196 739 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 CYGBQ8WWM9 190 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 EDC3Q96F86 508 aaKnown RBP13.14□□□□□ -0.31
SMU1-201ENST00000397149 DCUN1D1Q96GG9 259 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 CCND2P30279 289 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 CHRNA3P32297 505 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 DR1Q01658 176 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 SYCP2LQ5T4T6 812 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 TRIM33Q9UPN9 1127 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 PRR23AA6NEV1 266 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 FKBP9O95302 570 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 ITGAXP20702 1163 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 FKBP9P1Q75LS8 142 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.14□□□□□ -0.31
SMU1-201ENST00000397149 ZNF556Q9HAH1 456 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 HAUS4Q9H6D7 363 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 CFTRP13569 1480 aa13.14□□□□□ -0.31
SMU1-201ENST00000397149 KPNA7A9QM74 516 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 MIGA2Q7L4E1 593 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 CATSPER4Q7RTX7 472 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 KRT78Q8N1N4 520 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 UNC45AQ9H3U1 944 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 ARHGEF37A1IGU5 675 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 CCDC78A2IDD5 438 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 CC2D1AQ6P1N0 951 aaPredicted RBP13.13□□□□□ -0.31
SMU1-201ENST00000397149 TLK2Q86UE8 772 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 CLEC4FQ8N1N0 589 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 SH3GL1Q99961 368 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 DYTNA2CJ06 578 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 RAB14P61106 215 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 PSMC5P62195 406 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 ZNF555Q8NEP9 628 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 THAP11Q96EK4 314 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 ZNF274Q96GC6 653 aaPredicted RBP13.13□□□□□ -0.31
SMU1-201ENST00000397149 FMO2Q99518 471 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 KLHL31Q9H511 634 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 FYNP06241 537 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 NUP62P37198 522 aaPredicted RBP13.13□□□□□ -0.31
SMU1-201ENST00000397149 BFSP2Q13515 415 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 LAMC2Q13753 1193 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 PDXDC2PQ6P474 469 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 RIN3Q8TB24 985 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 ZC3H15Q8WU90 426 aaKnown RBP13.13□□□□□ -0.31
SMU1-201ENST00000397149 MAD2L2Q9UI95 211 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 SFI1A8K8P3 1242 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 MYBP10242 640 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 GYS1P13807 737 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 COPB2P35606 906 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 ARF5P84085 180 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 PPM1NQ8N819 430 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 HES6Q96HZ4 224 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 MSTO1Q9BUK6 570 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 PCDH11XQ9BZA7 1347 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 PCDH11YQ9BZA8 1340 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 FLT3P36888 993 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 SERPINB10P48595 397 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 EPHB4P54760 987 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 CYP27A1Q02318 531 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 RBL2Q08999 1139 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 CUL3Q13618 768 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 EIF4A2Q14240 407 aaKnown RBP13.13□□□□□ -0.31
SMU1-201ENST00000397149 C6orf10Q5SRN2 563 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 TWF2Q6IBS0 349 aaKnown RBP13.13□□□□□ -0.31
SMU1-201ENST00000397149 TBC1D22AQ8WUA7 517 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 GPBP1L1Q9HC44 474 aaPredicted RBP13.13□□□□□ -0.31
SMU1-201ENST00000397149 STK17AQ9UEE5 414 aa13.13□□□□□ -0.31
SMU1-201ENST00000397149 ZC3H7BQ9UGR2 993 aaKnown RBP13.13□□□□□ -0.31
SMU1-201ENST00000397149 EPRSP07814 1512 aaKnown RBP13.13□□□□□ -0.31
SMU1-201ENST00000397149 ADGRF5Q8IZF2 1346 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 TARSL2A2RTX5 802 aaKnown RBP13.12□□□□□ -0.31
SMU1-201ENST00000397149 RASA4BC9J798 803 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 RASA4O43374 803 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 SRGAP2O75044 1071 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 SPARCL1Q14515 664 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 OSBPL1AQ9BXW6 950 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 LSG1Q9H089 658 aaKnown RBP13.12□□□□□ -0.31
SMU1-201ENST00000397149 SPTLC3Q9NUV7 552 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 AGRPO00253 132 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 SEC24BO95487 1268 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 HMOX2P30519 316 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 SLC27A3Q5K4L6 730 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 LRRC8BQ6P9F7 803 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 RNASE11Q8TAA1 199 aaKnown RBP13.12□□□□□ -0.31
SMU1-201ENST00000397149 ALG13Q9NP73 1137 aaKnown RBP13.12□□□□□ -0.31
SMU1-201ENST00000397149 A0A087WUV0 522 aaPredicted RBP13.12□□□□□ -0.31
SMU1-201ENST00000397149 RNMTO43148 476 aaKnown RBP13.12□□□□□ -0.31
SMU1-201ENST00000397149 DARSP14868 501 aaKnown RBP13.12□□□□□ -0.31
SMU1-201ENST00000397149 ADD1P35611 737 aaKnown RBP13.12□□□□□ -0.31
SMU1-201ENST00000397149 ATP9BO43861 1147 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 RASSF9O75901 435 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 AP2B1P63010 937 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 ITPRIPL1Q6GPH6 555 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 CCDC81Q6ZN84 652 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 CHSY1Q86X52 802 aa13.12□□□□□ -0.31
SMU1-201ENST00000397149 DCAF5Q96JK2 942 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms