RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 IQSEC1Q6DN90 963 aa5.78□□□□□ -1.48
CMC1-202ENST00000396610 FRMD5Q7Z6J6 570 aa5.78□□□□□ -1.48
CMC1-202ENST00000396610 LGI4Q8N135 537 aa5.78□□□□□ -1.48
CMC1-202ENST00000396610 RPGRQ92834 1020 aaKnown RBP5.78□□□□□ -1.48
CMC1-202ENST00000396610 CARD11Q9BXL7 1154 aa5.78□□□□□ -1.48
CMC1-202ENST00000396610 PITHD1Q9GZP4 211 aaPredicted RBP5.78□□□□□ -1.48
CMC1-202ENST00000396610 KCMF1Q9P0J7 381 aa5.78□□□□□ -1.48
CMC1-202ENST00000396610 INVSQ9Y283 1065 aa5.78□□□□□ -1.48
CMC1-202ENST00000396610 NOC2LQ9Y3T9 749 aaKnown RBP5.78□□□□□ -1.48
CMC1-202ENST00000396610 ST20-MTHFSA0A0A6YYL1 179 aa5.77□□□□□ -1.49
CMC1-202ENST00000396610 PRICKLE3O43900 615 aaPredicted RBP5.77□□□□□ -1.49
CMC1-202ENST00000396610 PCDH8O95206 1070 aa5.77□□□□□ -1.49
CMC1-202ENST00000396610 MANFP55145 182 aaKnown RBP5.77□□□□□ -1.49
CMC1-202ENST00000396610 BCAR1P56945 870 aa5.77□□□□□ -1.49
CMC1-202ENST00000396610 ANTXR2P58335 489 aa5.77□□□□□ -1.49
CMC1-202ENST00000396610 PCOLCEQ15113 449 aa5.77□□□□□ -1.49
CMC1-202ENST00000396610 PDCD1Q15116 288 aa5.77□□□□□ -1.49
CMC1-202ENST00000396610 ZNF827Q17R98 1081 aa5.77□□□□□ -1.49
CMC1-202ENST00000396610 FRMD7Q6ZUT3 714 aa5.77□□□□□ -1.49
CMC1-202ENST00000396610 FERMT3Q86UX7 667 aa5.77□□□□□ -1.49
CMC1-202ENST00000396610 RASSF3Q86WH2 238 aa5.77□□□□□ -1.49
CMC1-202ENST00000396610 RTKN2Q8IZC4 609 aa5.77□□□□□ -1.49
CMC1-202ENST00000396610 PCDH12Q9NPG4 1184 aa5.77□□□□□ -1.49
CMC1-202ENST00000396610 POLR3BQ9NW08 1133 aaPredicted RBP5.77□□□□□ -1.49
CMC1-202ENST00000396610 RTEL1Q9NZ71 1219 aa5.77□□□□□ -1.49
CMC1-202ENST00000396610 PRSS38A1L453 326 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 OPHN1O60890 802 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 PFKMP08237 780 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 CELA3BP08861 270 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 MRE11P49959 708 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 DGKDQ16760 1214 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 PTPROQ16827 1216 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 AGBL4Q5VU57 503 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 RNF219Q5W0B1 726 aaPredicted RBP5.76□□□□□ -1.49
CMC1-202ENST00000396610 TRIM68Q6AZZ1 485 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 CCDC62Q6P9F0 684 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 BMP8AQ7Z5Y6 402 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 PLEKHH3Q7Z736 793 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 CMIPQ8IY22 773 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 DYDC2Q96IM9 177 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 TEPSINQ96N21 525 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 ANO3Q9BYT9 981 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 HAPLN2Q9GZV7 340 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 SAE1Q9UBE0 346 aaPredicted RBP5.76□□□□□ -1.49
CMC1-202ENST00000396610 DNAI1Q9UI46 699 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 DENND2AQ9ULE3 1009 aa5.76□□□□□ -1.49
CMC1-202ENST00000396610 A0A0A6YYJ9 748 aa5.75□□□□□ -1.49
CMC1-202ENST00000396610 B4GALT4O60513 344 aa5.75□□□□□ -1.49
CMC1-202ENST00000396610 CNOT4O95628 575 aaKnown RBP5.75□□□□□ -1.49
CMC1-202ENST00000396610 CDK11BP21127 795 aaKnown RBP5.75□□□□□ -1.49
CMC1-202ENST00000396610 MEOX1P50221 254 aa5.75□□□□□ -1.49
CMC1-202ENST00000396610 CTSWP56202 376 aa5.75□□□□□ -1.49
CMC1-202ENST00000396610 TBR1Q16650 682 aa5.75□□□□□ -1.49
CMC1-202ENST00000396610 ZNF568Q3ZCX4 644 aa5.75□□□□□ -1.49
CMC1-202ENST00000396610 PRPF38AQ8NAV1 312 aaKnown RBP5.75□□□□□ -1.49
CMC1-202ENST00000396610 C20orf173Q96LM9 149 aa5.75□□□□□ -1.49
CMC1-202ENST00000396610 PRDM12Q9H4Q4 367 aa5.75□□□□□ -1.49
CMC1-202ENST00000396610 C14orf119Q9NWQ9 140 aa5.75□□□□□ -1.49
CMC1-202ENST00000396610 FAM184BQ9ULE4 1060 aa5.75□□□□□ -1.49
CMC1-202ENST00000396610 SLC4A7Q9Y6M7 1214 aa5.75□□□□□ -1.49
CMC1-202ENST00000396610 MYPNQ86TC9 1320 aa5.74□□□□□ -1.49
CMC1-202ENST00000396610 LAMTOR5O43504 91 aa5.74□□□□□ -1.49
CMC1-202ENST00000396610 EVA1CP58658 441 aa5.74□□□□□ -1.49
CMC1-202ENST00000396610 PPARAQ07869 468 aa5.74□□□□□ -1.49
CMC1-202ENST00000396610 ADAM15Q13444 863 aa5.74□□□□□ -1.49
CMC1-202ENST00000396610 FAM50AQ14320 339 aaKnown RBP5.74□□□□□ -1.49
CMC1-202ENST00000396610 RNF151Q2KHN1 245 aa5.74□□□□□ -1.49
CMC1-202ENST00000396610 CT83Q5H943 113 aa5.74□□□□□ -1.49
CMC1-202ENST00000396610 ZMAT1Q5H9K5 638 aa5.74□□□□□ -1.49
CMC1-202ENST00000396610 UBXN11Q5T124 520 aa5.74□□□□□ -1.49
CMC1-202ENST00000396610 OR14K1Q8NGZ2 314 aa5.74□□□□□ -1.49
CMC1-202ENST00000396610 NKD2Q969F2 451 aaPredicted RBP5.74□□□□□ -1.49
CMC1-202ENST00000396610 NOL10Q9BSC4 688 aaKnown RBP5.74□□□□□ -1.49
CMC1-202ENST00000396610 TRIM8Q9BZR9 551 aa5.74□□□□□ -1.49
CMC1-202ENST00000396610 MEGF9Q9H1U4 602 aa5.74□□□□□ -1.49
CMC1-202ENST00000396610 PCDHB6Q9Y5E3 794 aa5.74□□□□□ -1.49
CMC1-202ENST00000396610 PHLDB1Q86UU1 1377 aa5.73□□□□□ -1.49
CMC1-202ENST00000396610 A0A0A6YYK5 440 aaPredicted RBP5.73□□□□□ -1.49
CMC1-202ENST00000396610 LPLP06858 475 aa5.73□□□□□ -1.49
CMC1-202ENST00000396610 BUD31P41223 144 aaPredicted RBP5.73□□□□□ -1.49
CMC1-202ENST00000396610 EPHB4P54760 987 aa5.73□□□□□ -1.49
CMC1-202ENST00000396610 ERVK-21P61565 698 aa5.73□□□□□ -1.49
CMC1-202ENST00000396610 TRIM25Q14258 630 aaKnown RBP5.73□□□□□ -1.49
CMC1-202ENST00000396610 NFIXQ14938 502 aa5.73□□□□□ -1.49
CMC1-202ENST00000396610 PITRM1Q5JRX3 1037 aa5.73□□□□□ -1.49
CMC1-202ENST00000396610 KLHDC10Q6PID8 442 aa5.73□□□□□ -1.49
CMC1-202ENST00000396610 ARHGEF18Q6ZSZ5 1173 aa5.73□□□□□ -1.49
CMC1-202ENST00000396610 NECAB2Q7Z6G3 386 aa5.73□□□□□ -1.49
CMC1-202ENST00000396610 LYSMD2Q8IV50 215 aa5.73□□□□□ -1.49
CMC1-202ENST00000396610 CNTD1Q8N815 330 aa5.73□□□□□ -1.49
CMC1-202ENST00000396610 CDYL2Q8N8U2 506 aa5.73□□□□□ -1.49
CMC1-202ENST00000396610 ZCRB1Q8TBF4 217 aaKnown RBP5.73□□□□□ -1.49
CMC1-202ENST00000396610 TGFBRAP1Q8WUH2 860 aa5.73□□□□□ -1.49
CMC1-202ENST00000396610 AHCYL2Q96HN2 611 aaKnown RBP5.73□□□□□ -1.49
CMC1-202ENST00000396610 PTPN18Q99952 460 aa5.73□□□□□ -1.49
CMC1-202ENST00000396610 SOX7Q9BT81 388 aa5.73□□□□□ -1.49
CMC1-202ENST00000396610 OR10A2Q9H208 303 aa5.73□□□□□ -1.49
CMC1-202ENST00000396610 KCTD10Q9H3F6 313 aa5.73□□□□□ -1.49
CMC1-202ENST00000396610 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.73□□□□□ -1.49
CMC1-202ENST00000396610 SLC5A4Q9NY91 659 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms