RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 KIAA0825Q8IV33 1275 aa14.9□□□□□ -0.02
COL4A3-202ENST00000396578 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.9□□□□□ -0.02
COL4A3-202ENST00000396578 DEAF1O75398 565 aaPredicted RBP14.9□□□□□ -0.02
COL4A3-202ENST00000396578 KRT14P02533 472 aa14.9□□□□□ -0.02
COL4A3-202ENST00000396578 RASSF3Q86WH2 238 aa14.9□□□□□ -0.02
COL4A3-202ENST00000396578 ULK4Q96C45 1275 aa14.9□□□□□ -0.02
COL4A3-202ENST00000396578 AP5M1Q9H0R1 490 aa14.9□□□□□ -0.02
COL4A3-202ENST00000396578 CEP72Q9P209 647 aa14.9□□□□□ -0.02
COL4A3-202ENST00000396578 GRID2IPA4D2P6 1211 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 KDM4CQ9H3R0 1056 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 ARFIP2P53365 341 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 CHRNDQ07001 517 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 KCTD2Q14681 263 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 LRRC8EQ6NSJ5 796 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 DNAJC10Q8IXB1 793 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 VPS11Q9H270 941 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 E5RI56 91 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 CIAO1O76071 339 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 ACTN3Q08043 901 aaPredicted RBP14.89□□□□□ -0.03
COL4A3-202ENST00000396578 KIAA1755Q5JYT7 1200 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 CHAMP1Q96JM3 812 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 STAP2Q9UGK3 403 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 HPCAL4Q9UM19 191 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 UBXN2AP68543 259 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 MAPRE2Q15555 327 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 PPP6R3Q5H9R7 873 aaPredicted RBP14.89□□□□□ -0.03
COL4A3-202ENST00000396578 ZNF496Q96IT1 587 aaPredicted RBP14.89□□□□□ -0.03
COL4A3-202ENST00000396578 PSAPP07602 524 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 ARL6IP4Q66PJ3 421 aaKnown RBP14.89□□□□□ -0.03
COL4A3-202ENST00000396578 CYP4F11Q9HBI6 524 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 PKD2L2Q9NZM6 624 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 PAIP2BQ9ULR5 123 aaKnown RBP14.89□□□□□ -0.03
COL4A3-202ENST00000396578 SRGAP2O75044 1071 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 CALB1P05937 261 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 RBBP7Q16576 425 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 ZNF555Q8NEP9 628 aa14.89□□□□□ -0.03
COL4A3-202ENST00000396578 NGRNQ9NPE2 291 aaKnown RBP14.89□□□□□ -0.03
COL4A3-202ENST00000396578 ANKRD65E5RJM6 399 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 WBP4O75554 376 aaKnown RBP14.88□□□□□ -0.03
COL4A3-202ENST00000396578 WDR47O94967 919 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 GPC5P78333 572 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 ACBD5Q5T8D3 534 aaPredicted RBP14.88□□□□□ -0.03
COL4A3-202ENST00000396578 PROM2Q8N271 834 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 OSBPL9Q96SU4 736 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 TAF1DQ9H5J8 278 aaPredicted RBP14.88□□□□□ -0.03
COL4A3-202ENST00000396578 HEY1Q9Y5J3 304 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 STXBP3O00186 592 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 NR5A1Q13285 461 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 MXD4Q14582 209 aaPredicted RBP14.88□□□□□ -0.03
COL4A3-202ENST00000396578 CC2D1AQ6P1N0 951 aaPredicted RBP14.88□□□□□ -0.03
COL4A3-202ENST00000396578 SEL1LQ9UBV2 794 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 SNX24Q9Y343 169 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 ZNF804BA4D1E1 1349 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 OSTNP61366 133 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 Q3C1V9 767 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 MSTO1Q9BUK6 570 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 FTOQ9C0B1 505 aaKnown RBP eCLIP14.88□□□□□ -0.03
COL4A3-202ENST00000396578 ASNSD1Q9NWL6 643 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 S100A5P33763 92 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 RESP18Q5W5W9 173 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 ADCK1Q86TW2 530 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 MTRQ99707 1265 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 CCNA1P78396 465 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 PODNQ7Z5L7 613 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 B4GALNT2Q8NHY0 566 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 SLC13A1Q9BZW2 595 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 MLXIPLQ9NP71 852 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 MLH3Q9UHC1 1453 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 PRR23D1E9PI22 279 aaPredicted RBP14.88□□□□□ -0.03
COL4A3-202ENST00000396578 PRR23D2P0DMB1 279 aaPredicted RBP14.88□□□□□ -0.03
COL4A3-202ENST00000396578 MAP4P27816 1152 aaKnown RBP14.88□□□□□ -0.03
COL4A3-202ENST00000396578 LRRC24Q50LG9 513 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 NAALADL2Q58DX5 795 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 EHD2Q9NZN4 543 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 MKRN3Q13064 507 aaKnown RBP14.88□□□□□ -0.03
COL4A3-202ENST00000396578 TBC1D9BQ66K14 1250 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 RUBCNQ92622 972 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 DCPSQ96C86 337 aaKnown RBP14.88□□□□□ -0.03
COL4A3-202ENST00000396578 ADAM22Q9P0K1 906 aa14.88□□□□□ -0.03
COL4A3-202ENST00000396578 K7ERI5 159 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 PER1O15534 1290 aaPredicted RBP14.87□□□□□ -0.03
COL4A3-202ENST00000396578 KRT75O95678 551 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 MRPS25P82663 173 aaKnown RBP14.87□□□□□ -0.03
COL4A3-202ENST00000396578 HIC1Q14526 733 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 SNF8Q96H20 258 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 EDEM3Q9BZQ6 932 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 ABCC2Q92887 1545 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 POU5F1BQ06416 359 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 THAP11Q96EK4 314 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 ABHD8Q96I13 439 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 ASAP2O43150 1006 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 PDE8BO95263 885 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 LDHAP00338 332 aaKnown RBP14.87□□□□□ -0.03
COL4A3-202ENST00000396578 USP14P54578 494 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 GPS1Q13098 491 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 DMC1Q14565 340 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 PBXIP1Q96AQ6 731 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 ADNPQ9H2P0 1102 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 MAFGO15525 162 aa14.87□□□□□ -0.03
COL4A3-202ENST00000396578 VCAM1P19320 739 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms