RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 FAN1Q9Y2M0 1017 aa18.08■□□□□ 0.48
TRIM39-205ENST00000396551 PPP1R12BO60237 982 aaPredicted RBP18.07■□□□□ 0.48
TRIM39-205ENST00000396551 VPS18Q9P253 973 aa18.07■□□□□ 0.48
TRIM39-205ENST00000396551 ERICH4A6NGS2 130 aa18.07■□□□□ 0.48
TRIM39-205ENST00000396551 DDX3XO00571 662 aaKnown RBP eCLIP18.07■□□□□ 0.48
TRIM39-205ENST00000396551 GFPT2O94808 682 aa18.07■□□□□ 0.48
TRIM39-205ENST00000396551 EIF2AK2P19525 551 aaKnown RBP18.07■□□□□ 0.48
TRIM39-205ENST00000396551 CCDC102AQ96A19 550 aa18.07■□□□□ 0.48
TRIM39-205ENST00000396551 FRMD4BQ9Y2L6 1034 aa18.07■□□□□ 0.48
TRIM39-205ENST00000396551 TISP43B9A030 160 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 K7ENM7 598 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 FLOT1O75955 427 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 VCAM1P19320 739 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 RARRES1P49788 294 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 RPS6P62753 249 aaKnown RBP18.06■□□□□ 0.48
TRIM39-205ENST00000396551 CFAP221Q4G0U5 840 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 CCDC70Q6NSX1 233 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 SLC9A9Q8IVB4 645 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 INPP4AQ96PE3 977 aaPredicted RBP18.06■□□□□ 0.48
TRIM39-205ENST00000396551 GPR88Q9GZN0 384 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 TAOK3Q9H2K8 898 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 GOLPH3Q9H4A6 298 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 PPP1R9AQ9ULJ8 1098 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 BRD2P25440 801 aaKnown RBP18.06■□□□□ 0.48
TRIM39-205ENST00000396551 AARSP49588 968 aaKnown RBP eCLIP18.06■□□□□ 0.48
TRIM39-205ENST00000396551 MTMR1Q13613 665 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 PGM5Q15124 567 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 UGCGQ16739 394 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 LNX1Q8TBB1 728 aaPredicted RBP18.06■□□□□ 0.48
TRIM39-205ENST00000396551 SLC16A10Q8TF71 515 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 SH2D3AQ9BRG2 576 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 DBR1Q9UK59 544 aaKnown RBP18.06■□□□□ 0.48
TRIM39-205ENST00000396551 TMEM150BA6NC51 233 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 F8VZ95 297 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 NFKBIEO00221 500 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 EVI5O60447 810 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 MTMR2Q13614 643 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 PPP2R5AQ15172 486 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 JDP2Q8WYK2 163 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 RUBCNQ92622 972 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 RNF14Q9UBS8 474 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 DNAJC12Q9UKB3 198 aa18.06■□□□□ 0.48
TRIM39-205ENST00000396551 COL11A1P12107 1806 aaPredicted RBP18.05■□□□□ 0.48
TRIM39-205ENST00000396551 DOCK1Q14185 1865 aa18.05■□□□□ 0.48
TRIM39-205ENST00000396551 CTNND1O60716 968 aaKnown RBP18.05■□□□□ 0.48
TRIM39-205ENST00000396551 SYF2O95926 243 aaKnown RBP18.05■□□□□ 0.48
TRIM39-205ENST00000396551 FERP16591 822 aa18.05■□□□□ 0.48
TRIM39-205ENST00000396551 ANXA13P27216 316 aa18.05■□□□□ 0.48
TRIM39-205ENST00000396551 STAT1P42224 750 aa18.05■□□□□ 0.48
TRIM39-205ENST00000396551 TNIP1Q15025 636 aa18.05■□□□□ 0.48
TRIM39-205ENST00000396551 SYCP3Q8IZU3 236 aa18.05■□□□□ 0.48
TRIM39-205ENST00000396551 LRRC57Q8N9N7 239 aa18.05■□□□□ 0.48
TRIM39-205ENST00000396551 RDH13Q8NBN7 331 aa18.05■□□□□ 0.48
TRIM39-205ENST00000396551 FAM71BQ8TC56 605 aa18.05■□□□□ 0.48
TRIM39-205ENST00000396551 IPO4Q8TEX9 1081 aaKnown RBP18.05■□□□□ 0.48
TRIM39-205ENST00000396551 WNK4Q96J92 1243 aa18.05■□□□□ 0.48
TRIM39-205ENST00000396551 INTS2Q9H0H0 1204 aaKnown RBP18.05■□□□□ 0.48
TRIM39-205ENST00000396551 WDR81Q562E7 1941 aa18.05■□□□□ 0.48
TRIM39-205ENST00000396551 SOX5P35711 763 aa18.05■□□□□ 0.48
TRIM39-205ENST00000396551 QARSP47897 775 aaKnown RBP18.05■□□□□ 0.48
TRIM39-205ENST00000396551 BFSP1Q12934 665 aa18.05■□□□□ 0.48
TRIM39-205ENST00000396551 SAMM50Q9Y512 469 aa18.05■□□□□ 0.48
TRIM39-205ENST00000396551 ATP8B3O60423 1300 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 EXOC3O60645 756 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 ATP9AO75110 1047 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 TNFAIP1Q13829 316 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 DRAP1Q14919 205 aaPredicted RBP18.04■□□□□ 0.48
TRIM39-205ENST00000396551 SAMD7Q7Z3H4 446 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 SLC30A5Q8TAD4 765 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 GOLGA5Q8TBA6 731 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 STK33Q9BYT3 514 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 ACBD3Q9H3P7 528 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 RPAP3Q9H6T3 665 aaPredicted RBP18.04■□□□□ 0.48
TRIM39-205ENST00000396551 STIM2Q9P246 746 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 RLFQ13129 1914 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 LYPLA2O95372 231 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 EXOC4Q96A65 974 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 SYT11Q9BT88 431 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 PCIF1Q9H4Z3 704 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 PHACTR2O75167 634 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 MYCLP12524 364 aaPredicted RBP18.04■□□□□ 0.48
TRIM39-205ENST00000396551 BAG6P46379 1132 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 DLG4P78352 724 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 MYL7Q01449 175 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 C8orf74Q6P047 294 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 LMO3Q8TAP4 145 aa18.04■□□□□ 0.48
TRIM39-205ENST00000396551 U2AF1L4Q8WU68 220 aaKnown RBP18.04■□□□□ 0.48
TRIM39-205ENST00000396551 LARSQ9P2J5 1176 aaKnown RBP18.04■□□□□ 0.48
TRIM39-205ENST00000396551 ZBTB48P10074 688 aaPredicted RBP18.03■□□□□ 0.48
TRIM39-205ENST00000396551 TGFB2P61812 414 aa18.03■□□□□ 0.48
TRIM39-205ENST00000396551 DALRD3Q5D0E6 543 aaKnown RBP18.03■□□□□ 0.48
TRIM39-205ENST00000396551 ZSWIM2Q8NEG5 633 aa18.03■□□□□ 0.48
TRIM39-205ENST00000396551 TPCN2Q8NHX9 752 aa18.03■□□□□ 0.48
TRIM39-205ENST00000396551 PDCD2LQ9BRP1 358 aa18.03■□□□□ 0.48
TRIM39-205ENST00000396551 MED4Q9NPJ6 270 aa18.03■□□□□ 0.48
TRIM39-205ENST00000396551 MAP3K20Q9NYL2 800 aaKnown RBP18.03■□□□□ 0.48
TRIM39-205ENST00000396551 MAPTP10636 758 aaKnown RBP18.03■□□□□ 0.48
TRIM39-205ENST00000396551 PLS3P13797 630 aa18.03■□□□□ 0.48
TRIM39-205ENST00000396551 YWHABP31946 246 aaKnown RBP18.03■□□□□ 0.48
TRIM39-205ENST00000396551 NOP2P46087 812 aaKnown RBP18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms