RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 SLF2Q8IX21 1173 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 COQ7Q99807 217 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 BPIFA3Q9BQP9 254 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 ZSWIM5Q9P217 1185 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 PCDHGA4Q9Y5G9 962 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 SBF2Q86WG5 1849 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 CASQ2O14958 399 aaPredicted RBP9.07□□□□□ -0.96
NDE1-202ENST00000396355 PRKAB2O43741 272 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 CELF2O95319 508 aaKnown RBP9.07□□□□□ -0.96
NDE1-202ENST00000396355 BMP6P22004 513 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 SERPINB6P35237 376 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 FNTAP49354 379 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 INHBEP58166 350 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 QPCTQ16769 361 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 ZCWPW2Q504Y3 356 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 DDX42Q86XP3 938 aaKnown RBP eCLIP9.07□□□□□ -0.96
NDE1-202ENST00000396355 PALB2Q86YC2 1186 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 BTBD7Q9P203 1132 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 ARPP21Q9UBL0 812 aaPredicted RBP9.07□□□□□ -0.96
NDE1-202ENST00000396355 SATB2Q9UPW6 733 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 WNK3Q9BYP7 1800 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 MYH6P13533 1939 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 TTLL13PA6NNM8 815 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 SPTLC1O15269 473 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 FANCGO15287 622 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 LINGO3P0C6S8 592 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 GFAPP14136 432 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 ARPC4P59998 168 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 CYTH1Q15438 398 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 DPP8Q6V1X1 898 aaPredicted RBP9.07□□□□□ -0.96
NDE1-202ENST00000396355 METTL16Q86W50 562 aaKnown RBP9.07□□□□□ -0.96
NDE1-202ENST00000396355 SPATA4Q8NEY3 305 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 FLCNQ8NFG4 579 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 ZNF570Q96NI8 536 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 MIS12Q9H081 205 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 NAPBQ9H115 298 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 CTDP1Q9Y5B0 961 aaPredicted RBP9.07□□□□□ -0.96
NDE1-202ENST00000396355 A0A1B0GUL6 1792 aa9.07□□□□□ -0.96
NDE1-202ENST00000396355 IKBKBO14920 756 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 RIMBP2O15034 1052 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 MCF2LO15068 1137 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 RAD17O75943 681 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 ABL1P00519 1130 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 MYCLP1P12525 358 aaPredicted RBP9.06□□□□□ -0.96
NDE1-202ENST00000396355 ZNF24P17028 368 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 MLLT1Q03111 559 aaPredicted RBP9.06□□□□□ -0.96
NDE1-202ENST00000396355 ITGA7Q13683 1181 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 CYP4F22Q6NT55 531 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 PRR23CQ6ZRP0 262 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 CMTR1Q8N1G2 835 aaKnown RBP9.06□□□□□ -0.96
NDE1-202ENST00000396355 MLKLQ8NB16 471 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 SHISA4Q96DD7 197 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 SLC26A6Q9BXS9 759 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 SH2D4AQ9H788 454 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 SEC31BQ9NQW1 1179 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 TUBE1Q9UJT0 475 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 SH3GLB1Q9Y371 365 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 ZC3H4Q9UPT8 1303 aaKnown RBP9.06□□□□□ -0.96
NDE1-202ENST00000396355 CICQ96RK0 1608 aaPredicted RBP9.06□□□□□ -0.96
NDE1-202ENST00000396355 POTEFA5A3E0 1075 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 WTIPA6NIX2 430 aaPredicted RBP9.06□□□□□ -0.96
NDE1-202ENST00000396355 SLC26A4O43511 780 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 XPOTO43592 962 aaKnown RBP9.06□□□□□ -0.96
NDE1-202ENST00000396355 GMNNO75496 209 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 LCA5LO95447 670 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 ITGB3BPQ13352 177 aaPredicted RBP9.06□□□□□ -0.96
NDE1-202ENST00000396355 KIF22Q14807 665 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 THOC7Q6I9Y2 204 aaKnown RBP9.06□□□□□ -0.96
NDE1-202ENST00000396355 KANK3Q6NY19 840 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 SGMS1Q86VZ5 419 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 LRRC34Q8IZ02 419 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 KIFC2Q96AC6 838 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 PHF12Q96QT6 1004 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 TSPAN18Q96SJ8 248 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 ZKSCAN3Q9BRR0 538 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 ARMT1Q9H993 441 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 MLXIPQ9HAP2 919 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 FGFR1OP2Q9NVK5 253 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 CCPG1Q9ULG6 757 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 UTP11Q9Y3A2 253 aaKnown RBP9.06□□□□□ -0.96
NDE1-202ENST00000396355 BAZ2AQ9UIF9 1905 aaKnown RBP9.06□□□□□ -0.96
NDE1-202ENST00000396355 CSPG5O95196 566 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 TOB1P50616 345 aaPredicted RBP9.06□□□□□ -0.96
NDE1-202ENST00000396355 PLTPP55058 493 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 SFMBT2Q5VUG0 894 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 CCDC62Q6P9F0 684 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 MAGEB6Q8N7X4 407 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 CAPNS2Q96L46 248 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 NOX5Q96PH1 765 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 PANX2Q96RD6 677 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 ZC4H2Q9NQZ6 224 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 TCP11L1Q9NUJ3 509 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 PACSIN2Q9UNF0 486 aaPredicted RBP9.06□□□□□ -0.96
NDE1-202ENST00000396355 MYH2Q9UKX2 1941 aa9.06□□□□□ -0.96
NDE1-202ENST00000396355 GSG1L2A8MUP6 293 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 TCP11X1B4DZS4 312 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 IFIT3O14879 490 aaKnown RBP9.05□□□□□ -0.96
NDE1-202ENST00000396355 PDE8AO60658 829 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 PRPF6O94906 941 aaKnown RBP9.05□□□□□ -0.96
NDE1-202ENST00000396355 CHN1P15882 459 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms