RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 STAT1P42224 750 aa18.32■□□□□ 0.52
NUP50-202ENST00000396096 GMPSP49915 693 aaPredicted RBP18.32■□□□□ 0.52
NUP50-202ENST00000396096 JAK3P52333 1124 aa18.32■□□□□ 0.52
NUP50-202ENST00000396096 DGKZQ13574 1117 aa18.32■□□□□ 0.52
NUP50-202ENST00000396096 CCDC181Q5TID7 509 aa18.32■□□□□ 0.52
NUP50-202ENST00000396096 DCAF15Q66K64 600 aa18.32■□□□□ 0.52
NUP50-202ENST00000396096 VPS36Q86VN1 386 aa18.32■□□□□ 0.52
NUP50-202ENST00000396096 FMNL3Q8IVF7 1028 aa18.32■□□□□ 0.52
NUP50-202ENST00000396096 PDCD2LQ9BRP1 358 aa18.32■□□□□ 0.52
NUP50-202ENST00000396096 PXMP2Q9NR77 195 aa18.32■□□□□ 0.52
NUP50-202ENST00000396096 RNF216Q9NWF9 866 aaPredicted RBP18.32■□□□□ 0.52
NUP50-202ENST00000396096 GRID2IPA4D2P6 1211 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 VWA5AO00534 786 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 CES2O00748 559 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 EIF2AK2P19525 551 aaKnown RBP18.31■□□□□ 0.52
NUP50-202ENST00000396096 CYP2J2P51589 502 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 SNRPFP62306 86 aaKnown RBP18.31■□□□□ 0.52
NUP50-202ENST00000396096 BFSP1Q12934 665 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 SPP2Q13103 211 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 ENOX2Q16206 610 aaKnown RBP18.31■□□□□ 0.52
NUP50-202ENST00000396096 IFI16Q16666 785 aaKnown RBP18.31■□□□□ 0.52
NUP50-202ENST00000396096 ALKBH5Q6P6C2 394 aaKnown RBP18.31■□□□□ 0.52
NUP50-202ENST00000396096 RNF207Q6ZRF8 634 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 SYCP3Q8IZU3 236 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 TRERF1Q96PN7 1200 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 ACBD3Q9H3P7 528 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 PDE11AQ9HCR9 933 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 HOMER2Q9NSB8 354 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 CTDP1Q9Y5B0 961 aaPredicted RBP18.31■□□□□ 0.52
NUP50-202ENST00000396096 PHIPQ8WWQ0 1821 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 ASTN2O75129 1339 aaPredicted RBP18.31■□□□□ 0.52
NUP50-202ENST00000396096 A0A0A6YYK5 440 aaPredicted RBP18.31■□□□□ 0.52
NUP50-202ENST00000396096 POLR3GO15318 223 aaPredicted RBP18.31■□□□□ 0.52
NUP50-202ENST00000396096 RFX1P22670 979 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 SFNP31947 248 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 CXCR5P32302 372 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 SOX5P35711 763 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 BACE1P56817 501 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 MCCD1P59942 119 aaPredicted RBP18.31■□□□□ 0.52
NUP50-202ENST00000396096 CFAP221Q4G0U5 840 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 GLE1Q53GS7 698 aaKnown RBP18.31■□□□□ 0.52
NUP50-202ENST00000396096 SCYL3Q8IZE3 742 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 RDM1Q8NG50 284 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 OLIG1Q8TAK6 271 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 ACCSQ96QU6 501 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 RMDN3Q96TC7 470 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 AS3MTQ9HBK9 375 aa18.31■□□□□ 0.52
NUP50-202ENST00000396096 COL11A1P12107 1806 aaPredicted RBP18.3■□□□□ 0.52
NUP50-202ENST00000396096 WDR81Q562E7 1941 aa18.3■□□□□ 0.52
NUP50-202ENST00000396096 LRRIQ3A6PVS8 624 aaPredicted RBP18.3■□□□□ 0.52
NUP50-202ENST00000396096 F8VZ95 297 aa18.3■□□□□ 0.52
NUP50-202ENST00000396096 FZD9O00144 591 aa18.3■□□□□ 0.52
NUP50-202ENST00000396096 MAPK13O15264 365 aa18.3■□□□□ 0.52
NUP50-202ENST00000396096 EXOC3O60645 756 aa18.3■□□□□ 0.52
NUP50-202ENST00000396096 YWHABP31946 246 aaKnown RBP18.3■□□□□ 0.52
NUP50-202ENST00000396096 PSMC5P62195 406 aa18.3■□□□□ 0.52
NUP50-202ENST00000396096 KRT76Q01546 638 aa18.3■□□□□ 0.52
NUP50-202ENST00000396096 CBWD6Q4V339 395 aa18.3■□□□□ 0.52
NUP50-202ENST00000396096 CBWD3Q5JTY5 395 aa18.3■□□□□ 0.52
NUP50-202ENST00000396096 CBWD5Q5RIA9 395 aa18.3■□□□□ 0.52
NUP50-202ENST00000396096 NBPF12Q5TAG4 269 aaPredicted RBP18.3■□□□□ 0.52
NUP50-202ENST00000396096 GJB7Q6PEY0 223 aa18.3■□□□□ 0.52
NUP50-202ENST00000396096 ZNF771Q7L3S4 317 aaPredicted RBP18.3■□□□□ 0.52
NUP50-202ENST00000396096 SAMD7Q7Z3H4 446 aa18.3■□□□□ 0.52
NUP50-202ENST00000396096 SLC17A8Q8NDX2 589 aa18.3■□□□□ 0.52
NUP50-202ENST00000396096 SLC30A5Q8TAD4 765 aa18.3■□□□□ 0.52
NUP50-202ENST00000396096 C12orf42Q96LP6 360 aa18.3■□□□□ 0.52
NUP50-202ENST00000396096 INTS2Q9H0H0 1204 aaKnown RBP18.3■□□□□ 0.52
NUP50-202ENST00000396096 ANKEF1Q9NU02 776 aa18.3■□□□□ 0.52
NUP50-202ENST00000396096 CNOT7Q9UIV1 285 aaKnown RBP18.3■□□□□ 0.52
NUP50-202ENST00000396096 SAMM50Q9Y512 469 aa18.3■□□□□ 0.52
NUP50-202ENST00000396096 DDX3XO00571 662 aaKnown RBP eCLIP18.29■□□□□ 0.52
NUP50-202ENST00000396096 TNFRSF8P28908 595 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 AARSP49588 968 aaKnown RBP eCLIP18.29■□□□□ 0.52
NUP50-202ENST00000396096 OAZ1P54368 228 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 GTF2BQ00403 316 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 MYL7Q01449 175 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 INTS8Q75QN2 995 aaKnown RBP18.29■□□□□ 0.52
NUP50-202ENST00000396096 REPS2Q8NFH8 660 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 SENP7Q9BQF6 1050 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 SYT11Q9BT88 431 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 LRRC1Q9BTT6 524 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 ZCCHC17Q9NP64 241 aaKnown RBP18.29■□□□□ 0.52
NUP50-202ENST00000396096 DNAJC12Q9UKB3 198 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 WDR64B1ANS9 1081 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 P4HA2O15460 535 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 EVI5O60447 810 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 ZBTB7AO95365 584 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 FTCDO95954 541 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 UGCGQ16739 394 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 TBC1D10BQ4KMP7 808 aaPredicted RBP18.29■□□□□ 0.52
NUP50-202ENST00000396096 LRRC57Q8N9N7 239 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 AENQ8WTP8 325 aaKnown RBP18.29■□□□□ 0.52
NUP50-202ENST00000396096 ATG4CQ96DT6 458 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 INPP4AQ96PE3 977 aaPredicted RBP18.29■□□□□ 0.52
NUP50-202ENST00000396096 IWS1Q96ST2 819 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 PSMB7Q99436 277 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 GPR88Q9GZN0 384 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 MAF1Q9H063 256 aa18.29■□□□□ 0.52
NUP50-202ENST00000396096 MED4Q9NPJ6 270 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms