RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 TAOK3Q9H2K8 898 aa5.51□□□□□ -1.53
FGD4-201ENST00000395740 MTRF1LQ9UGC7 380 aaKnown RBP5.51□□□□□ -1.53
FGD4-201ENST00000395740 TRPC6Q9Y210 931 aa5.51□□□□□ -1.53
FGD4-201ENST00000395740 C15orf41Q9Y2V0 281 aa5.51□□□□□ -1.53
FGD4-201ENST00000395740 ACTL7BQ9Y614 415 aa5.51□□□□□ -1.53
FGD4-201ENST00000395740 SYNGAP1Q96PV0 1343 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 QSER1Q2KHR3 1735 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 SNED1Q8TER0 1413 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 ZSCAN5CA6NGD5 496 aaPredicted RBP5.5□□□□□ -1.53
FGD4-201ENST00000395740 RARGP13631 454 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 UCHL3P15374 230 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 MUTP22033 750 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 RXRBP28702 533 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 PMS2P54278 862 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 PTK2Q05397 1052 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 KLRC3Q07444 240 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 RAPGEF1Q13905 1077 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 PLS1Q14651 629 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 ZNF568Q3ZCX4 644 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 C11orf63Q6NUN7 778 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 CEP128Q6ZU80 1094 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 ZNF571Q7Z3V5 609 aaPredicted RBP5.5□□□□□ -1.53
FGD4-201ENST00000395740 RHOT2Q8IXI1 618 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 RASGRP4Q8TDF6 673 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 SNX29Q8TEQ0 813 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 ATP8B4Q8TF62 1192 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 ZBTB9Q96C00 473 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 SERPINB12Q96P63 405 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 SYT11Q9BT88 431 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 NEUROG2Q9H2A3 272 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 NLRC4Q9NPP4 1024 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 EMILIN3Q9NT22 766 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 SMARCAL1Q9NZC9 954 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 ADAMTS1Q9UHI8 967 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 USP20Q9Y2K6 914 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 COL4A1P02462 1669 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 LOC102724428A0A0B4J2F2 783 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 ESYT3A0FGR9 886 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 EIF3DO15371 548 aaKnown RBP eCLIP5.5□□□□□ -1.53
FGD4-201ENST00000395740 DDX3YO15523 660 aaKnown RBP5.5□□□□□ -1.53
FGD4-201ENST00000395740 NMT2O60551 498 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 CTNND1O60716 968 aaKnown RBP5.5□□□□□ -1.53
FGD4-201ENST00000395740 GJB6O95452 261 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 NQO1P15559 274 aaKnown RBP5.5□□□□□ -1.53
FGD4-201ENST00000395740 RASA1P20936 1047 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 CTNNA2P26232 953 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 HPDP32754 393 aaPredicted RBP5.5□□□□□ -1.53
FGD4-201ENST00000395740 STAT1P42224 750 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 GYG1P46976 350 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 ADCY7P51828 1080 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 SLC18A1P54219 525 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 SIK1P57059 783 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 CAV1Q03135 178 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 BNIP1Q12981 228 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 ADAM9Q13443 819 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 EPHA7Q15375 998 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 EXOC3L4Q17RC7 722 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 SKIDA1Q1XH10 827 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 PARP6Q2NL67 630 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 KIAA1755Q5JYT7 1200 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 DENND2CQ68D51 928 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 RNF43Q68DV7 783 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 SYDE1Q6ZW31 735 aaPredicted RBP5.5□□□□□ -1.53
FGD4-201ENST00000395740 KLHL7Q8IXQ5 586 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 SLFN12Q8IYM2 578 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 ANKRD13CQ8N6S4 541 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 C12orf50Q8NA57 414 aaPredicted RBP5.5□□□□□ -1.53
FGD4-201ENST00000395740 STK33Q9BYT3 514 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 NYXQ9GZU5 481 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 ADAM7Q9H2U9 754 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 EPB41L4BQ9H329 900 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 ARHGEF3Q9NR81 526 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 TYW1Q9NV66 732 aaKnown RBP5.5□□□□□ -1.53
FGD4-201ENST00000395740 MCM9Q9NXL9 1143 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 ARMCX3Q9UH62 379 aaPredicted RBP5.5□□□□□ -1.53
FGD4-201ENST00000395740 USP21Q9UK80 565 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 HDAC9Q9UKV0 1011 aa5.5□□□□□ -1.53
FGD4-201ENST00000395740 CORO1CQ9ULV4 474 aaPredicted RBP5.5□□□□□ -1.53
FGD4-201ENST00000395740 TAF1P21675 1872 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 ANKRD62A6NC57 917 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 KIAA0391O15091 583 aaKnown RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 NKRFO15226 690 aaKnown RBP eCLIP5.49□□□□□ -1.53
FGD4-201ENST00000395740 DAPK3O43293 454 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 EDIL3O43854 480 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 SNX3O60493 162 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 PHF2O75151 1096 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 SUN1O94901 812 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 EYA4O95677 639 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 CCNB1P14635 433 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 CHN1P15882 459 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 GAP43P17677 238 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 PON1P27169 355 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 EPS15P42566 896 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 TXKP42681 527 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 CLNS1AP54105 237 aaKnown RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 SARNPP82979 210 aaKnown RBP5.49□□□□□ -1.53
FGD4-201ENST00000395740 MAPK7Q13164 816 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 AMIGO3Q86WK7 504 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 FAM133AQ8N9E0 248 aa5.49□□□□□ -1.53
FGD4-201ENST00000395740 ARMC2Q8NEN0 867 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms