RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 CEP135Q66GS9 1140 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 SEPT1Q8WYJ6 367 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 ARMC5Q96C12 935 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 PPP1R13BQ96KQ4 1090 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 REEP2Q9BRK0 252 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 PAK6Q9NQU5 681 aaPredicted RBP16.66■□□□□ 0.26
SCAF11-204ENST00000395454 RGL1Q9NZL6 768 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 WDR81Q562E7 1941 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 TUBB4AP04350 444 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 CPT1AP50416 773 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 MARSP56192 900 aaKnown RBP16.66■□□□□ 0.26
SCAF11-204ENST00000395454 BEX3Q00994 111 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 CYP4A11Q02928 519 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 GOLGA8FQ08AF8 430 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 GOLGA8DPQ0D2H9 430 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 FSCN1Q16658 493 aaKnown RBP16.66■□□□□ 0.26
SCAF11-204ENST00000395454 BRDTQ58F21 947 aaPredicted RBP16.66■□□□□ 0.26
SCAF11-204ENST00000395454 MIS18BP1Q6P0N0 1132 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 PPP4R3CPQ6ZMV5 832 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 SCFD1Q8WVM8 642 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 C16orf45Q96MC5 204 aaPredicted RBP16.66■□□□□ 0.26
SCAF11-204ENST00000395454 DEFB118Q96PH6 123 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 ERGIC2Q96RQ1 377 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 BHMT2Q9H2M3 363 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 KCTD10Q9H3F6 313 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 OLFML3Q9NRN5 406 aa16.66■□□□□ 0.26
SCAF11-204ENST00000395454 NPHP3-ACAD11A0A0J9YXS1 232 aa16.65■□□□□ 0.26
SCAF11-204ENST00000395454 GSTTP1A0A1W2PQM5 241 aa16.65■□□□□ 0.26
SCAF11-204ENST00000395454 BACH1O14867 736 aa16.65■□□□□ 0.26
SCAF11-204ENST00000395454 PSAPP07602 524 aa16.65■□□□□ 0.26
SCAF11-204ENST00000395454 MMP3P08254 477 aa16.65■□□□□ 0.26
SCAF11-204ENST00000395454 FXR1P51114 621 aaKnown RBP eCLIP16.65■□□□□ 0.26
SCAF11-204ENST00000395454 GJA9P57773 515 aa16.65■□□□□ 0.26
SCAF11-204ENST00000395454 UBXN1Q04323 297 aa16.65■□□□□ 0.26
SCAF11-204ENST00000395454 FIGNQ5HY92 759 aa16.65■□□□□ 0.26
SCAF11-204ENST00000395454 LHX8Q68G74 356 aa16.65■□□□□ 0.26
SCAF11-204ENST00000395454 RINT1Q6NUQ1 792 aa16.65■□□□□ 0.26
SCAF11-204ENST00000395454 DYDC2Q96IM9 177 aa16.65■□□□□ 0.26
SCAF11-204ENST00000395454 CEP63Q96MT8 703 aa16.65■□□□□ 0.26
SCAF11-204ENST00000395454 NACC1Q96RE7 527 aa16.65■□□□□ 0.26
SCAF11-204ENST00000395454 TSG101Q99816 390 aa16.65■□□□□ 0.26
SCAF11-204ENST00000395454 FGFBP2Q9BYJ0 223 aa16.65■□□□□ 0.26
SCAF11-204ENST00000395454 TTYH3Q9C0H2 523 aa16.65■□□□□ 0.26
SCAF11-204ENST00000395454 MYADML2A6NDP7 307 aa16.64■□□□□ 0.26
SCAF11-204ENST00000395454 A6NJR5 290 aa16.64■□□□□ 0.26
SCAF11-204ENST00000395454 LYPLA2O95372 231 aa16.64■□□□□ 0.26
SCAF11-204ENST00000395454 SUPT20HL2P0C7V6 817 aa16.64■□□□□ 0.26
SCAF11-204ENST00000395454 GAP43P17677 238 aa16.64■□□□□ 0.26
SCAF11-204ENST00000395454 CASP14P31944 242 aa16.64■□□□□ 0.26
SCAF11-204ENST00000395454 FKBP3Q00688 224 aaKnown RBP16.64■□□□□ 0.26
SCAF11-204ENST00000395454 DGKDQ16760 1214 aa16.64■□□□□ 0.26
SCAF11-204ENST00000395454 EDRF1Q3B7T1 1238 aa16.64■□□□□ 0.26
SCAF11-204ENST00000395454 HERC4Q5GLZ8 1057 aaPredicted RBP16.64■□□□□ 0.26
SCAF11-204ENST00000395454 GNASQ5JWF2 1037 aa16.64■□□□□ 0.26
SCAF11-204ENST00000395454 UTP14CQ5TAP6 766 aaKnown RBP16.64■□□□□ 0.26
SCAF11-204ENST00000395454 ABHD15Q6UXT9 468 aa16.64■□□□□ 0.26
SCAF11-204ENST00000395454 C1orf186Q6ZWK4 172 aa16.64■□□□□ 0.26
SCAF11-204ENST00000395454 RETREG2Q8NC44 543 aa16.64■□□□□ 0.26
SCAF11-204ENST00000395454 BANK1Q8NDB2 785 aa16.64■□□□□ 0.26
SCAF11-204ENST00000395454 RDM1Q8NG50 284 aa16.64■□□□□ 0.26
SCAF11-204ENST00000395454 IQCDQ96DY2 449 aa16.64■□□□□ 0.26
SCAF11-204ENST00000395454 RUSC1Q9BVN2 902 aa16.64■□□□□ 0.26
SCAF11-204ENST00000395454 KIAA0100Q14667 2235 aaKnown RBP16.64■□□□□ 0.25
SCAF11-204ENST00000395454 ADAMTS4O75173 837 aa16.64■□□□□ 0.25
SCAF11-204ENST00000395454 ATG7O95352 703 aa16.64■□□□□ 0.25
SCAF11-204ENST00000395454 TPM2P07951 284 aa16.64■□□□□ 0.25
SCAF11-204ENST00000395454 TNNT1P13805 278 aa16.64■□□□□ 0.25
SCAF11-204ENST00000395454 GTF2F1P35269 517 aaKnown RBP eCLIP16.64■□□□□ 0.25
SCAF11-204ENST00000395454 ZNF131P52739 623 aa16.64■□□□□ 0.25
SCAF11-204ENST00000395454 CTTNQ14247 550 aaKnown RBP16.64■□□□□ 0.25
SCAF11-204ENST00000395454 LRRC41Q15345 812 aa16.64■□□□□ 0.25
SCAF11-204ENST00000395454 PTPN14Q15678 1187 aa16.64■□□□□ 0.25
SCAF11-204ENST00000395454 SWSAP1Q6NVH7 229 aa16.64■□□□□ 0.25
SCAF11-204ENST00000395454 TRMT1LQ7Z2T5 733 aaKnown RBP16.64■□□□□ 0.25
SCAF11-204ENST00000395454 TRIM50Q86XT4 487 aa16.64■□□□□ 0.25
SCAF11-204ENST00000395454 CCDC60Q8IWA6 550 aaPredicted RBP16.64■□□□□ 0.25
SCAF11-204ENST00000395454 GLG1Q92896 1179 aa16.64■□□□□ 0.25
SCAF11-204ENST00000395454 AZI2Q9H6S1 392 aa16.64■□□□□ 0.25
SCAF11-204ENST00000395454 WRAP73Q9P2S5 460 aaPredicted RBP16.64■□□□□ 0.25
SCAF11-204ENST00000395454 GABBR1Q9UBS5 961 aa16.64■□□□□ 0.25
SCAF11-204ENST00000395454 MYH9P35579 1960 aaKnown RBP16.64■□□□□ 0.25
SCAF11-204ENST00000395454 MYH11P35749 1972 aa16.63■□□□□ 0.25
SCAF11-204ENST00000395454 PPFIA4O75335 1185 aa16.63■□□□□ 0.25
SCAF11-204ENST00000395454 KRT18P05783 430 aaKnown RBP16.63■□□□□ 0.25
SCAF11-204ENST00000395454 TPM1P09493 284 aa16.63■□□□□ 0.25
SCAF11-204ENST00000395454 ZNF286BP0CG31 522 aa16.63■□□□□ 0.25
SCAF11-204ENST00000395454 MAN2A1Q16706 1144 aa16.63■□□□□ 0.25
SCAF11-204ENST00000395454 RNF180Q86T96 592 aa16.63■□□□□ 0.25
SCAF11-204ENST00000395454 TPH2Q8IWU9 490 aa16.63■□□□□ 0.25
SCAF11-204ENST00000395454 REXO1L1PQ8IX06 675 aa16.63■□□□□ 0.25
SCAF11-204ENST00000395454 MYRIPQ8NFW9 859 aa16.63■□□□□ 0.25
SCAF11-204ENST00000395454 LXNQ9BS40 222 aa16.63■□□□□ 0.25
SCAF11-204ENST00000395454 UPF3AQ9H1J1 476 aaKnown RBP16.63■□□□□ 0.25
SCAF11-204ENST00000395454 ABHD10Q9NUJ1 306 aa16.63■□□□□ 0.25
SCAF11-204ENST00000395454 TRAF3IP3Q9Y228 551 aa16.63■□□□□ 0.25
SCAF11-204ENST00000395454 COL4A3BPQ9Y5P4 624 aa16.63■□□□□ 0.25
SCAF11-204ENST00000395454 FRMPD3Q5JV73 1810 aa16.63■□□□□ 0.25
SCAF11-204ENST00000395454 ZSCAN12O43309 604 aa16.62■□□□□ 0.25
SCAF11-204ENST00000395454 LGALS2P05162 132 aa16.62■□□□□ 0.25
SCAF11-204ENST00000395454 P4HBP07237 508 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms