RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 CTNNA1P35221 906 aaKnown RBP22.43■■□□□ 1.18
CLK3-202ENST00000395066 PRPF4BQ13523 1007 aaKnown RBP22.43■■□□□ 1.18
CLK3-202ENST00000395066 BORCS6Q96GS4 357 aa22.43■■□□□ 1.18
CLK3-202ENST00000395066 TRIM51Q9BSJ1 452 aa22.43■■□□□ 1.18
CLK3-202ENST00000395066 WRAP73Q9P2S5 460 aaPredicted RBP22.43■■□□□ 1.18
CLK3-202ENST00000395066 FBXL5Q9UKA1 691 aa22.43■■□□□ 1.18
CLK3-202ENST00000395066 PPP1R9AQ9ULJ8 1098 aa22.43■■□□□ 1.18
CLK3-202ENST00000395066 STXBP5LQ9Y2K9 1186 aa22.43■■□□□ 1.18
CLK3-202ENST00000395066 BACH1O14867 736 aa22.42■■□□□ 1.18
CLK3-202ENST00000395066 LRRN2O75325 713 aa22.42■■□□□ 1.18
CLK3-202ENST00000395066 DRAP1Q14919 205 aaPredicted RBP22.42■■□□□ 1.18
CLK3-202ENST00000395066 BMT2Q1RMZ1 405 aa22.42■■□□□ 1.18
CLK3-202ENST00000395066 BANK1Q8NDB2 785 aa22.42■■□□□ 1.18
CLK3-202ENST00000395066 METTL14Q9HCE5 456 aaKnown RBP22.42■■□□□ 1.18
CLK3-202ENST00000395066 ANKRD31Q8N7Z5 1873 aa22.42■■□□□ 1.18
CLK3-202ENST00000395066 IGLV3-22A0A075B6J6 115 aa22.42■■□□□ 1.18
CLK3-202ENST00000395066 SLITRK3O94933 977 aa22.42■■□□□ 1.18
CLK3-202ENST00000395066 ECE1P42892 770 aa22.42■■□□□ 1.18
CLK3-202ENST00000395066 HDLBPQ00341 1268 aaKnown RBP22.42■■□□□ 1.18
CLK3-202ENST00000395066 IFI16Q16666 785 aaKnown RBP22.42■■□□□ 1.18
CLK3-202ENST00000395066 ARHGAP44Q17R89 818 aa22.42■■□□□ 1.18
CLK3-202ENST00000395066 TDRD3Q9H7E2 651 aaKnown RBP22.42■■□□□ 1.18
CLK3-202ENST00000395066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.42■■□□□ 1.188e-7■■■■■ 96.2
CLK3-202ENST00000395066 DNAJC12Q9UKB3 198 aa22.42■■□□□ 1.18
CLK3-202ENST00000395066 GOLGA6L10A6NI86 522 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 F8VZ95 297 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 FAM107AO95990 144 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 FGGP02679 453 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 BMP3P12645 472 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 SETQ01105 290 aaPredicted RBP22.41■■□□□ 1.18
CLK3-202ENST00000395066 ZNF844Q08AG5 666 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 ZNF211Q13398 564 aaPredicted RBP22.41■■□□□ 1.18
CLK3-202ENST00000395066 KIAA1755Q5JYT7 1200 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 RNF187Q5TA31 235 aaPredicted RBP22.41■■□□□ 1.18
CLK3-202ENST00000395066 MAEAQ7L5Y9 396 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 VPS36Q86VN1 386 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 SLC35G2Q8TBE7 412 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 ARHGEF26Q96DR7 871 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 TMBIM4Q9HC24 238 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 PPANQ9NQ55 473 aaKnown RBP22.41■■□□□ 1.18
CLK3-202ENST00000395066 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.41■■□□□ 1.18
CLK3-202ENST00000395066 CHORDC1Q9UHD1 332 aaPredicted RBP22.41■■□□□ 1.18
CLK3-202ENST00000395066 KIF13BQ9NQT8 1826 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 DCDC2CA8MYV0 355 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 UBAP1LF5GYI3 381 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 H0YGN5 161 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 DCAF12L1Q5VU92 463 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 CCDC174Q6PII3 467 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 TMEM179Q6ZVK1 233 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 SLFN11Q7Z7L1 901 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.41■■□□□ 1.18
CLK3-202ENST00000395066 PRR12Q9ULL5 1215 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 NFS1Q9Y697 457 aa22.41■■□□□ 1.18
CLK3-202ENST00000395066 E7EVH7 732 aa22.4■■□□□ 1.18
CLK3-202ENST00000395066 CES2O00748 559 aa22.4■■□□□ 1.18
CLK3-202ENST00000395066 SLC16A3O15427 465 aaKnown RBP22.4■■□□□ 1.18
CLK3-202ENST00000395066 TRIM37O94972 964 aa22.4■■□□□ 1.18
CLK3-202ENST00000395066 STAT1P42224 750 aa22.4■■□□□ 1.18
CLK3-202ENST00000395066 LRCH2Q5VUJ6 765 aa22.4■■□□□ 1.18
CLK3-202ENST00000395066 AADACL2Q6P093 401 aa22.4■■□□□ 1.18
CLK3-202ENST00000395066 TATDN1Q6P1N9 297 aa22.4■■□□□ 1.18
CLK3-202ENST00000395066 HSD17B14Q9BPX1 270 aa22.4■■□□□ 1.18
CLK3-202ENST00000395066 SRRM3A6NNA2 597 aaPredicted RBP22.4■■□□□ 1.18
CLK3-202ENST00000395066 TMOD1P28289 359 aa22.4■■□□□ 1.18
CLK3-202ENST00000395066 FMO5P49326 533 aa22.4■■□□□ 1.18
CLK3-202ENST00000395066 C1orf186Q6ZWK4 172 aa22.4■■□□□ 1.18
CLK3-202ENST00000395066 OTOP1Q7RTM1 612 aa22.4■■□□□ 1.18
CLK3-202ENST00000395066 ZNF622Q969S3 477 aaKnown RBP eCLIP22.4■■□□□ 1.182e-6■□□□□ 10.5
CLK3-202ENST00000395066 GPR88Q9GZN0 384 aa22.4■■□□□ 1.18
CLK3-202ENST00000395066 TISP43B9A030 160 aa22.39■■□□□ 1.18
CLK3-202ENST00000395066 CIITAP33076 1130 aa22.39■■□□□ 1.18
CLK3-202ENST00000395066 SOX5P35711 763 aa22.39■■□□□ 1.18
CLK3-202ENST00000395066 PSMC2P35998 433 aaKnown RBP22.39■■□□□ 1.18
CLK3-202ENST00000395066 LRIG3Q6UXM1 1119 aa22.39■■□□□ 1.18
CLK3-202ENST00000395066 ARFGAP2Q8N6H7 521 aa22.39■■□□□ 1.18
CLK3-202ENST00000395066 POLR3CQ9BUI4 534 aaPredicted RBP22.39■■□□□ 1.18
CLK3-202ENST00000395066 GGA2Q9UJY4 613 aa22.39■■□□□ 1.18
CLK3-202ENST00000395066 NRXN2Q9P2S2 1712 aa22.39■■□□□ 1.17
CLK3-202ENST00000395066 GCOM1H8Y6P7 765 aaPredicted RBP22.39■■□□□ 1.17
CLK3-202ENST00000395066 SLC26A4O43511 780 aa22.39■■□□□ 1.17
CLK3-202ENST00000395066 MYZAPP0CAP1 466 aa22.39■■□□□ 1.17
CLK3-202ENST00000395066 GSCP56915 257 aaPredicted RBP22.39■■□□□ 1.17
CLK3-202ENST00000395066 CUL1Q13616 776 aa22.39■■□□□ 1.17
CLK3-202ENST00000395066 EIF1ADQ8N9N8 165 aaKnown RBP22.39■■□□□ 1.17
CLK3-202ENST00000395066 SLC30A5Q8TAD4 765 aa22.39■■□□□ 1.17
CLK3-202ENST00000395066 HES6Q96HZ4 224 aa22.39■■□□□ 1.17
CLK3-202ENST00000395066 OLFML3Q9NRN5 406 aa22.39■■□□□ 1.17
CLK3-202ENST00000395066 PKD2L1Q9P0L9 805 aa22.39■■□□□ 1.17
CLK3-202ENST00000395066 SUCLA2Q9P2R7 463 aaPredicted RBP22.39■■□□□ 1.17
CLK3-202ENST00000395066 FOSP01100 380 aaPredicted RBP22.38■■□□□ 1.17
CLK3-202ENST00000395066 FERP16591 822 aa22.38■■□□□ 1.17
CLK3-202ENST00000395066 IFT88Q13099 833 aa22.38■■□□□ 1.17
CLK3-202ENST00000395066 GPATCH11Q8N954 259 aa22.38■■□□□ 1.17
CLK3-202ENST00000395066 FIZ1Q96SL8 496 aa22.38■■□□□ 1.17
CLK3-202ENST00000395066 THAP2Q9H0W7 228 aa22.38■■□□□ 1.17
CLK3-202ENST00000395066 ERVK-5Q9HDB9 667 aa22.38■■□□□ 1.17
CLK3-202ENST00000395066 DDX39AO00148 427 aaKnown RBP22.38■■□□□ 1.17
CLK3-202ENST00000395066 VCPKMTQ9H867 229 aa22.38■■□□□ 1.17
CLK3-202ENST00000395066 PARVGQ9HBI0 331 aa22.38■■□□□ 1.17
CLK3-202ENST00000395066 AMFRQ9UKV5 643 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms