RNA–Protein interactions for RNA: ENST00000394573.5

SLC28A1-203, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-203ENST00000394573 TBL3Q12788 808 aaKnown RBP13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 CCDC152Q4G0S7 254 aa13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 CSGALNACT2Q8N6G5 542 aa13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 IL17REQ8NFR9 667 aa13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 RIN3Q8TB24 985 aa13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 RBM46Q8TBY0 533 aaKnown RBP13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 GAB3Q8WWW8 586 aa13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 PGM2Q96G03 612 aa13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 SNX27Q96L92 541 aa13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 PLIN2Q99541 437 aa13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 MIPEPQ99797 713 aa13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 HAUS7Q99871 368 aa13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 UBA5Q9GZZ9 404 aa13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 TCP11L1Q9NUJ3 509 aa13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 STK32BQ9NY57 414 aa13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 RABL2AQ9UBK7 228 aaPredicted RBP13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 PLAGL2Q9UPG8 496 aa13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 NOC2LQ9Y3T9 749 aaKnown RBP13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 IVNS1ABPQ9Y6Y0 642 aa13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 MAP3K15Q6ZN16 1313 aa13.48□□□□□ -0.25
SLC28A1-203ENST00000394573 MROH7Q68CQ1 1323 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 OXSR1O95747 527 aaPredicted RBP13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 FGAP02671 866 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 RPN1P04843 607 aaKnown RBP13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 TFPTP0C1Z6 253 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 MARK3P27448 753 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 RASSF2P50749 326 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 CYLC2Q14093 348 aaPredicted RBP13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 ZNF174Q15697 407 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 LONRF1Q17RB8 773 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 PROSER3Q2NL68 480 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 RILPL1Q5EBL4 403 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 EARS2Q5JPH6 523 aaKnown RBP13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 ZNF658Q5TYW1 1059 aaPredicted RBP13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 EFCAB2Q5VUJ9 269 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 ZNF280DQ6N043 979 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 NME8Q8N427 588 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 ZNF713Q8N859 430 aaPredicted RBP13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 ZNF579Q8NAF0 562 aaKnown RBP13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 SH3TC2Q8TF17 1288 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 SPOCK2Q92563 424 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 PPP2R3CQ969Q6 453 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 SPATA17Q96L03 361 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 CEP295NLQ96MC4 621 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 OLFM3Q96PB7 478 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 LRRC37BQ96QE4 947 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 TMEM59LQ9UK28 342 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 MYO5AQ9Y4I1 1855 aaKnown RBP13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 UNCXA6NJT0 531 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 MMP1P03956 469 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 SMARCA1P28370 1054 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 TUFMP49411 452 aaKnown RBP13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 NAA20P61599 178 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 AP1B1Q10567 949 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 MPP2Q14168 576 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 RPS6KA1Q15418 735 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 DAB2IPQ5VWQ8 1189 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 APOA5Q6Q788 366 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 RBM44Q6ZP01 1051 aaKnown RBP13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 CYB5R4Q7L1T6 521 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 NCOA7Q8NI08 942 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 DQX1Q8TE96 717 aaKnown RBP13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 OSBP2Q969R2 916 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 CNOT6LQ96LI5 555 aaKnown RBP13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 NDEL1Q9GZM8 345 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 NT5C3AQ9H0P0 336 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 NR2E1Q9Y466 385 aa13.47□□□□□ -0.25
SLC28A1-203ENST00000394573 hCG_1642624A0A1W2PR95 340 aa13.46□□□□□ -0.25
SLC28A1-203ENST00000394573 PSMG1O95456 288 aa13.46□□□□□ -0.25
SLC28A1-203ENST00000394573 NAT2P11245 290 aa13.46□□□□□ -0.25
SLC28A1-203ENST00000394573 BTKQ06187 659 aa13.46□□□□□ -0.25
SLC28A1-203ENST00000394573 ACAP1Q15027 740 aa13.46□□□□□ -0.25
SLC28A1-203ENST00000394573 MYOCDQ8IZQ8 938 aa13.46□□□□□ -0.25
SLC28A1-203ENST00000394573 CCDC127Q96BQ5 260 aa13.46□□□□□ -0.25
SLC28A1-203ENST00000394573 SNX24Q9Y343 169 aa13.46□□□□□ -0.25
SLC28A1-203ENST00000394573 UTP11Q9Y3A2 253 aaKnown RBP13.46□□□□□ -0.25
SLC28A1-203ENST00000394573 RGL2O15211 777 aa13.46□□□□□ -0.26
SLC28A1-203ENST00000394573 USP1O94782 785 aa13.46□□□□□ -0.26
SLC28A1-203ENST00000394573 PABPC4LP0CB38 370 aaKnown RBP13.46□□□□□ -0.26
SLC28A1-203ENST00000394573 EEF1GP26641 437 aaKnown RBP13.46□□□□□ -0.26
SLC28A1-203ENST00000394573 U2AF1L4Q8WU68 220 aaKnown RBP13.46□□□□□ -0.26
SLC28A1-203ENST00000394573 SCFD2Q8WU76 684 aa13.46□□□□□ -0.26
SLC28A1-203ENST00000394573 GLG1Q92896 1179 aa13.46□□□□□ -0.26
SLC28A1-203ENST00000394573 STMN2Q93045 179 aa13.46□□□□□ -0.26
SLC28A1-203ENST00000394573 PABPC3Q9H361 631 aaKnown RBP13.46□□□□□ -0.26
SLC28A1-203ENST00000394573 FRMPD1Q5SYB0 1578 aa13.46□□□□□ -0.26
SLC28A1-203ENST00000394573 ARAP3Q8WWN8 1544 aa13.46□□□□□ -0.26
SLC28A1-203ENST00000394573 ZNF862O60290 1169 aa13.45□□□□□ -0.26
SLC28A1-203ENST00000394573 BAG2O95816 211 aa13.45□□□□□ -0.26
SLC28A1-203ENST00000394573 AGTP01019 485 aa13.45□□□□□ -0.26
SLC28A1-203ENST00000394573 PCSK6P29122 969 aa13.45□□□□□ -0.26
SLC28A1-203ENST00000394573 STX2P32856 288 aa13.45□□□□□ -0.26
SLC28A1-203ENST00000394573 POLR2FP61218 127 aaKnown RBP13.45□□□□□ -0.26
SLC28A1-203ENST00000394573 SSRP1Q08945 709 aaKnown RBP13.45□□□□□ -0.26
SLC28A1-203ENST00000394573 DCTN2Q13561 401 aaKnown RBP13.45□□□□□ -0.26
SLC28A1-203ENST00000394573 CLPPQ16740 277 aaPredicted RBP13.45□□□□□ -0.26
SLC28A1-203ENST00000394573 EXOC3L4Q17RC7 722 aa13.45□□□□□ -0.26
SLC28A1-203ENST00000394573 CCDC25Q86WR0 208 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms