RNA–Protein interactions for RNA: ENST00000394181.6

CLDND1-203, Transcript of claudin domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene CLDND1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-203ENST00000394181 FAM186BQ8IYM0 893 aa20.9■□□□□ 0.94
CLDND1-203ENST00000394181 BAP1Q92560 729 aa20.9■□□□□ 0.94
CLDND1-203ENST00000394181 SLC35C1Q96A29 364 aa20.9■□□□□ 0.94
CLDND1-203ENST00000394181 TIPINQ9BVW5 301 aa20.9■□□□□ 0.94
CLDND1-203ENST00000394181 IRX2Q9BZI1 471 aaPredicted RBP20.9■□□□□ 0.94
CLDND1-203ENST00000394181 FAM184BQ9ULE4 1060 aa20.9■□□□□ 0.94
CLDND1-203ENST00000394181 LRRC37A2A6NM11 1700 aa20.9■□□□□ 0.94
CLDND1-203ENST00000394181 RIOK3O14730 519 aaKnown RBP20.89■□□□□ 0.94
CLDND1-203ENST00000394181 SLC16A3O15427 465 aaKnown RBP20.89■□□□□ 0.94
CLDND1-203ENST00000394181 PLEKP08567 350 aaPredicted RBP20.89■□□□□ 0.94
CLDND1-203ENST00000394181 CCDC175P0C221 793 aa20.89■□□□□ 0.94
CLDND1-203ENST00000394181 TGFB3P10600 412 aa20.89■□□□□ 0.94
CLDND1-203ENST00000394181 ACTN1P12814 892 aa20.89■□□□□ 0.94
CLDND1-203ENST00000394181 XRCC5P13010 732 aaKnown RBP20.89■□□□□ 0.94
CLDND1-203ENST00000394181 NEDD9Q14511 834 aa20.89■□□□□ 0.94
CLDND1-203ENST00000394181 NFIL3Q16649 462 aa20.89■□□□□ 0.94
CLDND1-203ENST00000394181 HSDL1Q3SXM5 330 aa20.89■□□□□ 0.94
CLDND1-203ENST00000394181 TCERG1LQ5VWI1 586 aa20.89■□□□□ 0.94
CLDND1-203ENST00000394181 RRAGAQ7L523 313 aa20.89■□□□□ 0.94
CLDND1-203ENST00000394181 TMEM161BQ8NDZ6 487 aa20.89■□□□□ 0.94
CLDND1-203ENST00000394181 NEK11Q8NG66 645 aa20.89■□□□□ 0.94
CLDND1-203ENST00000394181 MLXIPQ9HAP2 919 aa20.89■□□□□ 0.94
CLDND1-203ENST00000394181 REXO2Q9Y3B8 237 aaKnown RBP20.89■□□□□ 0.94
CLDND1-203ENST00000394181 ADGRA3Q8IWK6 1321 aa20.89■□□□□ 0.93
CLDND1-203ENST00000394181 CCP110O43303 1012 aa20.89■□□□□ 0.93
CLDND1-203ENST00000394181 DKC1O60832 514 aaKnown RBP eCLIP20.89■□□□□ 0.93
CLDND1-203ENST00000394181 ECM2O94769 699 aaPredicted RBP20.89■□□□□ 0.93
CLDND1-203ENST00000394181 PSMC2P35998 433 aaKnown RBP20.89■□□□□ 0.93
CLDND1-203ENST00000394181 TCF7P36402 384 aaPredicted RBP20.89■□□□□ 0.93
CLDND1-203ENST00000394181 ACCSQ96QU6 501 aa20.89■□□□□ 0.93
CLDND1-203ENST00000394181 CBWD1Q9BRT8 395 aa20.89■□□□□ 0.93
CLDND1-203ENST00000394181 NLRC4Q9NPP4 1024 aa20.89■□□□□ 0.93
CLDND1-203ENST00000394181 LZTFL1Q9NQ48 299 aa20.89■□□□□ 0.93
CLDND1-203ENST00000394181 SLC45A1Q9Y2W3 748 aa20.89■□□□□ 0.93
CLDND1-203ENST00000394181 EPN1Q9Y6I3 576 aaPredicted RBP20.89■□□□□ 0.93
CLDND1-203ENST00000394181 LRRC53A6NM62 1247 aa20.88■□□□□ 0.93
CLDND1-203ENST00000394181 DGAT1O75907 488 aa20.88■□□□□ 0.93
CLDND1-203ENST00000394181 AFPP02771 609 aaKnown RBP20.88■□□□□ 0.93
CLDND1-203ENST00000394181 OATP04181 439 aa20.88■□□□□ 0.93
CLDND1-203ENST00000394181 SLC9A1P19634 815 aa20.88■□□□□ 0.93
CLDND1-203ENST00000394181 ADORA2AP29274 412 aa20.88■□□□□ 0.93
CLDND1-203ENST00000394181 TSR1Q2NL82 804 aaKnown RBP20.88■□□□□ 0.93
CLDND1-203ENST00000394181 DPY19L2P1Q6NXN4 242 aa20.88■□□□□ 0.93
CLDND1-203ENST00000394181 METTL7BQ6UX53 244 aa20.88■□□□□ 0.93
CLDND1-203ENST00000394181 TMEM143Q96AN5 459 aa20.88■□□□□ 0.93
CLDND1-203ENST00000394181 CCDC62Q6P9F0 684 aa20.87■□□□□ 0.93
CLDND1-203ENST00000394181 TRIM50Q86XT4 487 aa20.87■□□□□ 0.93
CLDND1-203ENST00000394181 ZNF397Q8NF99 534 aaPredicted RBP20.87■□□□□ 0.93
CLDND1-203ENST00000394181 PRIMPOLQ96LW4 560 aa20.87■□□□□ 0.93
CLDND1-203ENST00000394181 CEP89Q96ST8 783 aa20.87■□□□□ 0.93
CLDND1-203ENST00000394181 ST6GALNAC4Q9H4F1 302 aa20.87■□□□□ 0.93
CLDND1-203ENST00000394181 METTL14Q9HCE5 456 aaKnown RBP20.87■□□□□ 0.93
CLDND1-203ENST00000394181 TFR2Q9UP52 801 aa20.87■□□□□ 0.93
CLDND1-203ENST00000394181 ZNFX1Q9P2E3 1918 aaKnown RBP20.87■□□□□ 0.93
CLDND1-203ENST00000394181 ANKRD63C9JTQ0 380 aa20.87■□□□□ 0.93
CLDND1-203ENST00000394181 NDUFA10O95299 355 aa20.87■□□□□ 0.93
CLDND1-203ENST00000394181 HUNKP57058 714 aa20.87■□□□□ 0.93
CLDND1-203ENST00000394181 ETF1P62495 437 aaKnown RBP20.87■□□□□ 0.93
CLDND1-203ENST00000394181 DMP1Q13316 513 aaPredicted RBP20.87■□□□□ 0.93
CLDND1-203ENST00000394181 ZNF792Q3KQV3 632 aa20.87■□□□□ 0.93
CLDND1-203ENST00000394181 CELF3Q5SZQ8 465 aaKnown RBP20.87■□□□□ 0.93
CLDND1-203ENST00000394181 MORC4Q8TE76 937 aa20.87■□□□□ 0.93
CLDND1-203ENST00000394181 NHEJ1Q9H9Q4 299 aaPredicted RBP20.87■□□□□ 0.93
CLDND1-203ENST00000394181 TBX20Q9UMR3 447 aa20.87■□□□□ 0.93
CLDND1-203ENST00000394181 MCM3APO60318 1980 aa20.87■□□□□ 0.93
CLDND1-203ENST00000394181 UQCRHLA0A096LP55 91 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 DENND3A2RUS2 1198 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 EXOC3O60645 756 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 UQCRHP07919 91 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 STAT5BP51692 787 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 POLR2FP61218 127 aaKnown RBP20.86■□□□□ 0.93
CLDND1-203ENST00000394181 GJC2Q5T442 439 aaPredicted RBP20.86■□□□□ 0.93
CLDND1-203ENST00000394181 ARMCX2Q7L311 632 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 SEPT1Q8WYJ6 367 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 KIFAP3Q92845 792 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 GPR20Q99678 358 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 POLR3FQ9H1D9 316 aaPredicted RBP20.86■□□□□ 0.93
CLDND1-203ENST00000394181 TMEM206Q9H813 350 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 ATP6V0A4Q9HBG4 840 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 KMT5AQ9NQR1 393 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 DNAI1Q9UI46 699 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 PLAGL2Q9UPG8 496 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 TRIM49P0CI25 452 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 TRIM49CP0CI26 452 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 ZBTB48P10074 688 aaPredicted RBP20.86■□□□□ 0.93
CLDND1-203ENST00000394181 MARK3P27448 753 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 CCNA1P78396 465 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 EMC2Q15006 297 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 GTF3C2Q8WUA4 911 aaPredicted RBP20.86■□□□□ 0.93
CLDND1-203ENST00000394181 TSC1Q92574 1164 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 WDR24Q96S15 920 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 MPHOSPH6Q99547 160 aaKnown RBP20.86■□□□□ 0.93
CLDND1-203ENST00000394181 NTPCRQ9BSD7 190 aaKnown RBP20.86■□□□□ 0.93
CLDND1-203ENST00000394181 MORF4L1Q9UBU8 362 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 USP20Q9Y2K6 914 aa20.86■□□□□ 0.93
CLDND1-203ENST00000394181 PON1P27169 355 aa20.85■□□□□ 0.93
CLDND1-203ENST00000394181 ADSSP30520 456 aa20.85■□□□□ 0.93
CLDND1-203ENST00000394181 POLGP54098 1239 aaPredicted RBP20.85■□□□□ 0.93
CLDND1-203ENST00000394181 ALCAMQ13740 583 aa20.85■□□□□ 0.93
CLDND1-203ENST00000394181 CACNA2D4Q7Z3S7 1137 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms