RNA–Protein interactions for RNA: ENST00000394156.7

CDH11-202, Transcript of cadherin 11, humanhuman

TSL 1 (best) BASIC

Gene CDH11, Length 6,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-202ENST00000394156 ATP6V0A4Q9HBG4 840 aa9.83□□□□□ -0.84
CDH11-202ENST00000394156 C3P01024 1663 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 EFCAB8A8MWE9 144 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 MAP3K6O95382 1288 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 HMBSP08397 361 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 GAP43P17677 238 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 LMNB1P20700 586 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 ZNF699Q32M78 642 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 DNAAF3Q8N9W5 541 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 AFG1LQ8WV93 481 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 PHF20Q9BVI0 1012 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 ZNF233A6NK53 670 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 FGGP02679 453 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 TPD52P55327 224 aaPredicted RBP9.82□□□□□ -0.84
CDH11-202ENST00000394156 NPEPPSP55786 919 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 DRAP1Q14919 205 aaPredicted RBP9.82□□□□□ -0.84
CDH11-202ENST00000394156 SETDB1Q15047 1291 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 IL31Q6EBC2 164 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 CPB2Q96IY4 423 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 IWS1Q96ST2 819 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 PITPNM2Q9BZ72 1349 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 TXNP10599 105 aaKnown RBP9.82□□□□□ -0.84
CDH11-202ENST00000394156 CDC25BP30305 580 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 ZNF543Q08ER8 600 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 GLRA4Q5JXX5 417 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 LRRC43Q8N309 656 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 GOLGA5Q8TBA6 731 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 ENOX1Q8TC92 643 aaKnown RBP9.82□□□□□ -0.84
CDH11-202ENST00000394156 ATG4CQ96DT6 458 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 ABCB6Q9NP58 842 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 STK17AQ9UEE5 414 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 ZBTB39O15060 712 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 SRGAP2BP0DMP2 458 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 CCT5P48643 541 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 FAM133BQ5BKY9 247 aaKnown RBP9.82□□□□□ -0.84
CDH11-202ENST00000394156 FBXO33Q7Z6M2 555 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 HASPINQ8TF76 798 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 SLC4A9Q96Q91 983 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 ZBED2Q9BTP6 218 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 RAB17Q9H0T7 212 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 RRAGCQ9HB90 399 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 EIF4E1BA6NMX2 242 aaKnown RBP9.82□□□□□ -0.84
CDH11-202ENST00000394156 ZBBXA8MT70 800 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 C2CD2LO14523 706 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 CLGNO14967 610 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 DYNC1LI2O43237 492 aaPredicted RBP9.82□□□□□ -0.84
CDH11-202ENST00000394156 LPXNO60711 386 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 ATP1A1P05023 1023 aaKnown RBP9.82□□□□□ -0.84
CDH11-202ENST00000394156 KNOP1Q1ED39 458 aaKnown RBP9.82□□□□□ -0.84
CDH11-202ENST00000394156 TRIM68Q6AZZ1 485 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 C1orf54Q8WWF1 131 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 CNTNAP5Q8WYK1 1306 aa9.82□□□□□ -0.84
CDH11-202ENST00000394156 PEX10O60683 326 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 GPC3P51654 580 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 APBA1Q02410 837 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 C16orf86Q6ZW13 317 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.81□□□□□ -0.84
CDH11-202ENST00000394156 NUP85Q9BW27 656 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 COL5A2P05997 1499 aaPredicted RBP9.81□□□□□ -0.84
CDH11-202ENST00000394156 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.81□□□□□ -0.84
CDH11-202ENST00000394156 PI4K2BG5E9Z4 385 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 PLEKP08567 350 aaPredicted RBP9.81□□□□□ -0.84
CDH11-202ENST00000394156 EEF1GP26641 437 aaKnown RBP9.81□□□□□ -0.84
CDH11-202ENST00000394156 SRGAP1Q7Z6B7 1085 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 LRRC4Q9HBW1 653 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 SH3GLB2Q9NR46 395 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 REREQ9P2R6 1566 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 GCFC2P16383 781 aaKnown RBP9.81□□□□□ -0.84
CDH11-202ENST00000394156 LIG3P49916 1009 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 STRIP1Q5VSL9 837 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 VSIG1Q86XK7 387 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 SIK2Q9H0K1 926 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.81□□□□□ -0.84
CDH11-202ENST00000394156 QARSP47897 775 aaKnown RBP9.81□□□□□ -0.84
CDH11-202ENST00000394156 GTF2A1P52655 376 aaPredicted RBP9.81□□□□□ -0.84
CDH11-202ENST00000394156 SLC12A2P55011 1212 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 SF3B3Q15393 1217 aaKnown RBP9.81□□□□□ -0.84
CDH11-202ENST00000394156 AGR3Q8TD06 166 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 KIF12Q96FN5 646 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 TMEM206Q9H813 350 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 M0QYV0 167 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 IKBKBO14920 756 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 SLC15A2Q16348 729 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 WHAMMP3Q1A5X7 153 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 CCDC38Q502W7 563 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 PAN2Q504Q3 1202 aaKnown RBP9.81□□□□□ -0.84
CDH11-202ENST00000394156 FYB2Q5VWT5 728 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 ERICH1Q86X53 443 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 CYP2W1Q8TAV3 490 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 PPP1R12CQ9BZL4 782 aa9.81□□□□□ -0.84
CDH11-202ENST00000394156 N4BP1O75113 896 aaKnown RBP9.8□□□□□ -0.84
CDH11-202ENST00000394156 FTLP02792 175 aaPredicted RBP9.8□□□□□ -0.84
CDH11-202ENST00000394156 IVLP07476 585 aa9.8□□□□□ -0.84
CDH11-202ENST00000394156 FGFR4P22455 802 aa9.8□□□□□ -0.84
CDH11-202ENST00000394156 ATP2C1P98194 919 aaPredicted RBP9.8□□□□□ -0.84
CDH11-202ENST00000394156 STK4Q13043 487 aa9.8□□□□□ -0.84
CDH11-202ENST00000394156 BIRC2Q13490 618 aa9.8□□□□□ -0.84
CDH11-202ENST00000394156 EHD2Q9NZN4 543 aa9.8□□□□□ -0.84
CDH11-202ENST00000394156 GGT7Q9UJ14 662 aa9.8□□□□□ -0.84
CDH11-202ENST00000394156 ANAPC5Q9UJX4 755 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms