RNA–Protein interactions for RNA: ENST00000394106.6

CMTM4-202, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM4, Length 1,187 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-202ENST00000394106 LPXNO60711 386 aa34.37■■■■□ 3.09
CMTM4-202ENST00000394106 DGKIO75912 1065 aa34.37■■■■□ 3.09
CMTM4-202ENST00000394106 OR52Z1P0C646 297 aa34.37■■■■□ 3.09
CMTM4-202ENST00000394106 DARSP14868 501 aaKnown RBP34.37■■■■□ 3.09
CMTM4-202ENST00000394106 TRAPPC10P48553 1259 aa34.37■■■■□ 3.09
CMTM4-202ENST00000394106 MCTP1Q6DN14 999 aa34.37■■■■□ 3.09
CMTM4-202ENST00000394106 RHPN2Q8IUC4 686 aa34.37■■■■□ 3.09
CMTM4-202ENST00000394106 NEK9Q8TD19 979 aa34.37■■■■□ 3.09
CMTM4-202ENST00000394106 HSD17B14Q9BPX1 270 aa34.37■■■■□ 3.09
CMTM4-202ENST00000394106 RGS18Q9NS28 235 aa34.37■■■■□ 3.09
CMTM4-202ENST00000394106 SMC3Q9UQE7 1217 aa34.37■■■■□ 3.09
CMTM4-202ENST00000394106 PPME1Q9Y570 386 aa34.37■■■■□ 3.09
CMTM4-202ENST00000394106 NLRC5Q86WI3 1866 aa34.37■■■■□ 3.09
CMTM4-202ENST00000394106 ARID2Q68CP9 1835 aa34.37■■■■□ 3.09
CMTM4-202ENST00000394106 RFC5P40937 340 aa34.36■■■■□ 3.09
CMTM4-202ENST00000394106 SARSP49591 514 aaKnown RBP34.36■■■■□ 3.09
CMTM4-202ENST00000394106 BTG3Q14201 252 aaPredicted RBP34.36■■■■□ 3.09
CMTM4-202ENST00000394106 EPC2Q52LR7 807 aa34.36■■■■□ 3.09
CMTM4-202ENST00000394106 FAM43BQ6ZT52 329 aaPredicted RBP34.36■■■■□ 3.09
CMTM4-202ENST00000394106 SAMD11Q96NU1 681 aa34.36■■■■□ 3.09
CMTM4-202ENST00000394106 RC3H2Q9HBD1 1191 aaKnown RBP34.36■■■■□ 3.09
CMTM4-202ENST00000394106 C1orf112Q9NSG2 853 aa34.36■■■■□ 3.09
CMTM4-202ENST00000394106 CSDE1O75534 798 aaKnown RBP34.35■■■■□ 3.09
CMTM4-202ENST00000394106 POU3F3P20264 500 aaPredicted RBP34.35■■■■□ 3.09
CMTM4-202ENST00000394106 FGFR4P22455 802 aa34.35■■■■□ 3.09
CMTM4-202ENST00000394106 TECP42680 631 aa34.35■■■■□ 3.09
CMTM4-202ENST00000394106 CDC42EP1Q00587 391 aa34.35■■■■□ 3.09
CMTM4-202ENST00000394106 TMEM192Q8IY95 271 aa34.35■■■■□ 3.09
CMTM4-202ENST00000394106 EXOC8Q8IYI6 725 aa34.35■■■■□ 3.09
CMTM4-202ENST00000394106 CRIPAKQ8N1N5 446 aa34.35■■■■□ 3.09
CMTM4-202ENST00000394106 ZNF689Q96CS4 500 aaPredicted RBP34.35■■■■□ 3.09
CMTM4-202ENST00000394106 GCOM2Q9BZD3 368 aaPredicted RBP34.35■■■■□ 3.09
CMTM4-202ENST00000394106 PRDM6Q9NQX0 595 aa34.35■■■■□ 3.09
CMTM4-202ENST00000394106 PCDHB7Q9Y5E2 793 aa34.35■■■■□ 3.09
CMTM4-202ENST00000394106 A0A087WZ62 844 aa34.34■■■■□ 3.09
CMTM4-202ENST00000394106 H3BQV1 296 aa34.34■■■■□ 3.09
CMTM4-202ENST00000394106 SLC24A5Q71RS6 500 aa34.34■■■■□ 3.09
CMTM4-202ENST00000394106 KSR1Q8IVT5 923 aa34.34■■■■□ 3.09
CMTM4-202ENST00000394106 TMEM143Q96AN5 459 aa34.34■■■■□ 3.09
CMTM4-202ENST00000394106 NLRP4Q96MN2 994 aa34.34■■■■□ 3.09
CMTM4-202ENST00000394106 FDXACB1Q9BRP7 624 aaPredicted RBP34.34■■■■□ 3.09
CMTM4-202ENST00000394106 DHX33Q9H6R0 707 aaKnown RBP34.34■■■■□ 3.09
CMTM4-202ENST00000394106 ZSCAN21Q9Y5A6 473 aaPredicted RBP34.34■■■■□ 3.09
CMTM4-202ENST00000394106 TRANK1O15050 2925 aa34.33■■■■□ 3.09
CMTM4-202ENST00000394106 DSC3Q14574 896 aa34.33■■■■□ 3.09
CMTM4-202ENST00000394106 EMC2Q15006 297 aa34.33■■■■□ 3.09
CMTM4-202ENST00000394106 PAN2Q504Q3 1202 aaKnown RBP34.33■■■■□ 3.09
CMTM4-202ENST00000394106 RALGAPA2Q2PPJ7 1873 aa34.33■■■■□ 3.09
CMTM4-202ENST00000394106 C9IYK1 514 aa34.32■■■■□ 3.08
CMTM4-202ENST00000394106 LYPLA2O95372 231 aa34.32■■■■□ 3.08
CMTM4-202ENST00000394106 GATMP50440 423 aa34.32■■■■□ 3.08
CMTM4-202ENST00000394106 TOB1P50616 345 aaPredicted RBP34.32■■■■□ 3.08
CMTM4-202ENST00000394106 ZNF410Q86VK4 478 aa34.32■■■■□ 3.08
CMTM4-202ENST00000394106 CCDC43Q96MW1 224 aaKnown RBP34.32■■■■□ 3.08
CMTM4-202ENST00000394106 PRRC2BQ5JSZ5 2229 aaKnown RBP34.32■■■■□ 3.08
CMTM4-202ENST00000394106 A0A087WWV3 80 aa34.31■■■■□ 3.08
CMTM4-202ENST00000394106 ZSCAN20P17040 1043 aaPredicted RBP34.31■■■■□ 3.08
CMTM4-202ENST00000394106 CTNNB1P35222 781 aa34.31■■■■□ 3.08
CMTM4-202ENST00000394106 ANKEF1Q9NU02 776 aa34.31■■■■□ 3.08
CMTM4-202ENST00000394106 RNF216Q9NWF9 866 aaPredicted RBP34.31■■■■□ 3.08
CMTM4-202ENST00000394106 PCDHB6Q9Y5E3 794 aa34.31■■■■□ 3.08
CMTM4-202ENST00000394106 COL4A3BPQ9Y5P4 624 aa34.31■■■■□ 3.08
CMTM4-202ENST00000394106 SKIV2LQ15477 1246 aaKnown RBP34.3■■■■□ 3.08
CMTM4-202ENST00000394106 CMTR2Q8IYT2 770 aaKnown RBP34.3■■■■□ 3.08
CMTM4-202ENST00000394106 PIGOQ8TEQ8 1089 aa34.3■■■■□ 3.08
CMTM4-202ENST00000394106 PRPF31Q8WWY3 499 aaKnown RBP34.3■■■■□ 3.08
CMTM4-202ENST00000394106 PSPC1Q8WXF1 523 aaKnown RBP34.3■■■■□ 3.08
CMTM4-202ENST00000394106 GPM6BQ13491 265 aa34.29■■■■□ 3.08
CMTM4-202ENST00000394106 C4orf32Q8N8J7 132 aa34.29■■■■□ 3.08
CMTM4-202ENST00000394106 ERMNQ8TAM6 284 aa34.29■■■■□ 3.08
CMTM4-202ENST00000394106 TCP11Q8WWU5 503 aa34.29■■■■□ 3.08
CMTM4-202ENST00000394106 MTRQ99707 1265 aa34.29■■■■□ 3.08
CMTM4-202ENST00000394106 TUFT1Q9NNX1 390 aa34.29■■■■□ 3.08
CMTM4-202ENST00000394106 MRPL42Q9Y6G3 142 aaKnown RBP34.29■■■■□ 3.08
CMTM4-202ENST00000394106 PRUNE2Q8WUY3 3088 aa34.29■■■■□ 3.08
CMTM4-202ENST00000394106 GAS2O43903 313 aaKnown RBP34.28■■■■□ 3.08
CMTM4-202ENST00000394106 MED24O75448 989 aa34.28■■■■□ 3.08
CMTM4-202ENST00000394106 SPATA31C1P0DKV0 1188 aa34.28■■■■□ 3.08
CMTM4-202ENST00000394106 SFPQP23246 707 aaKnown RBP eCLIP34.28■■■■□ 3.08
CMTM4-202ENST00000394106 CATSPER3Q86XQ3 398 aa34.28■■■■□ 3.08
CMTM4-202ENST00000394106 INO80BQ9C086 356 aaPredicted RBP34.28■■■■□ 3.08
CMTM4-202ENST00000394106 ATP6V0A4Q9HBG4 840 aa34.28■■■■□ 3.08
CMTM4-202ENST00000394106 LMCD1Q9NZU5 365 aa34.28■■■■□ 3.08
CMTM4-202ENST00000394106 RWDD3Q9Y3V2 267 aa34.28■■■■□ 3.08
CMTM4-202ENST00000394106 H3BNC9 293 aa34.27■■■■□ 3.08
CMTM4-202ENST00000394106 LINC00271P0C7V0 271 aa34.27■■■■□ 3.08
CMTM4-202ENST00000394106 SRGAP2CP0DJJ0 459 aa34.27■■■■□ 3.08
CMTM4-202ENST00000394106 BMPR1AP36894 532 aa34.27■■■■□ 3.08
CMTM4-202ENST00000394106 FAM189BP81408 668 aa34.27■■■■□ 3.08
CMTM4-202ENST00000394106 LAMTOR4Q0VGL1 99 aa34.27■■■■□ 3.08
CMTM4-202ENST00000394106 PTGDRQ13258 359 aa34.27■■■■□ 3.08
CMTM4-202ENST00000394106 LARP1BQ659C4 914 aaKnown RBP34.27■■■■□ 3.08
CMTM4-202ENST00000394106 CLP1Q92989 425 aaKnown RBP34.27■■■■□ 3.08
CMTM4-202ENST00000394106 TMEM161AQ9NX61 479 aa34.27■■■■□ 3.08
CMTM4-202ENST00000394106 FAM102BQ5T8I3 360 aa34.26■■■■□ 3.08
CMTM4-202ENST00000394106 POLR3CQ9BUI4 534 aaPredicted RBP34.26■■■■□ 3.08
CMTM4-202ENST00000394106 XPNPEP1Q9NQW7 623 aa34.26■■■■□ 3.08
CMTM4-202ENST00000394106 TBKBP1A7MCY6 615 aa34.25■■■■□ 3.07
CMTM4-202ENST00000394106 FGFR1P11362 822 aa34.25■■■■□ 3.07
CMTM4-202ENST00000394106 RARRES1P49788 294 aa34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms