RNA–Protein interactions for RNA: ENST00000393943.9

GABRA1-202, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 4,686 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-202ENST00000393943 SCYL3Q8IZE3 742 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 DUSP9Q99956 384 aaKnown RBP9.25□□□□□ -0.93
GABRA1-202ENST00000393943 AMNQ9BXJ7 453 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 UVRAGQ9P2Y5 699 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 ZFP69BQ9UJL9 534 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 PACSIN2Q9UNF0 486 aaPredicted RBP9.25□□□□□ -0.93
GABRA1-202ENST00000393943 RPL26L1Q9UNX3 145 aaKnown RBP9.25□□□□□ -0.93
GABRA1-202ENST00000393943 REXO2Q9Y3B8 237 aaKnown RBP9.25□□□□□ -0.93
GABRA1-202ENST00000393943 ATP8B3O60423 1300 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 MYMKA6NI61 221 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 TCP11X1B4DZS4 312 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 MYBL1P10243 752 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 ACADSP16219 412 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 MAPK7Q13164 816 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 PRR16Q569H4 304 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 C1orf112Q9NSG2 853 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 NAGPAQ9UK23 515 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 PPP1R9AQ9ULJ8 1098 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 A0A087X0B3 334 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 CYP2D7A0A087X1C5 515 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 TBX3O15119 743 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 GAS7O60861 476 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 ESRRAP11474 423 aaPredicted RBP9.25□□□□□ -0.93
GABRA1-202ENST00000393943 FGFR2P21802 821 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 CA4P22748 312 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 PTK2Q05397 1052 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 TMC3Q7Z5M5 1100 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 METTL13Q8N6R0 699 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 NEDD1Q8NHV4 660 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 ACCSQ96QU6 501 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 TRAIPQ9BWF2 469 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 TXNDC16Q9P2K2 825 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 GGA1Q9UJY5 639 aa9.25□□□□□ -0.93
GABRA1-202ENST00000393943 TOPAZ1Q8N9V7 1692 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 HGSO14964 777 aaPredicted RBP9.24□□□□□ -0.93
GABRA1-202ENST00000393943 MSH2P43246 934 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 KLK7P49862 253 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 YWHAEP62258 255 aaKnown RBP9.24□□□□□ -0.93
GABRA1-202ENST00000393943 BIRC2Q13490 618 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 SYT2Q8N9I0 419 aaPredicted RBP9.24□□□□□ -0.93
GABRA1-202ENST00000393943 ALKBH8Q96BT7 664 aaKnown RBP9.24□□□□□ -0.93
GABRA1-202ENST00000393943 MAK16Q9BXY0 300 aaKnown RBP9.24□□□□□ -0.93
GABRA1-202ENST00000393943 SEC31BQ9NQW1 1179 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 PDP2Q9P2J9 529 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 SIK3Q9Y2K2 1263 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 RTCBQ9Y3I0 505 aaKnown RBP9.24□□□□□ -0.93
GABRA1-202ENST00000393943 N4BP2Q86UW6 1770 aaPredicted RBP9.24□□□□□ -0.93
GABRA1-202ENST00000393943 RBAK-RBAKDNI3L0D1 243 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 HAUS5O94927 633 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 ACSL3O95573 720 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 PLEKP08567 350 aaPredicted RBP9.24□□□□□ -0.93
GABRA1-202ENST00000393943 ATP2B4P23634 1241 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 SLC1A1P43005 524 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 PTENP60484 403 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 PABPC4Q13310 644 aaKnown RBP eCLIP9.24□□□□□ -0.93
GABRA1-202ENST00000393943 SEPT6Q14141 434 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 KLHL38Q2WGJ6 581 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 GDAP1Q8TB36 358 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.24□□□□□ -0.93
GABRA1-202ENST00000393943 MTMR8Q96EF0 704 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 RPS6KC1Q96S38 1066 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 RXFP1Q9HBX9 757 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 TFCP2L1Q9NZI6 479 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 ASAP1Q9ULH1 1129 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 SCINQ9Y6U3 715 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 IGF2BP3O00425 579 aaKnown RBP eCLIP9.24□□□□□ -0.93
GABRA1-202ENST00000393943 GYG2O15488 501 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 OPHN1O60890 802 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 BTDP43251 543 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 GALCP54803 685 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 CUL3Q13618 768 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 UAP1Q16222 522 aaPredicted RBP9.24□□□□□ -0.93
GABRA1-202ENST00000393943 PTPROQ16827 1216 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 ODR4Q5SWX8 454 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 C12orf60Q5U649 245 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 ATG16L1Q676U5 607 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 RBM17Q96I25 401 aaKnown RBP9.24□□□□□ -0.93
GABRA1-202ENST00000393943 FGD4Q96M96 766 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 ZFATQ9P243 1243 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 ZNF148Q9UQR1 794 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 PCDHA1Q9Y5I3 950 aa9.24□□□□□ -0.93
GABRA1-202ENST00000393943 IQANK1A0A1B0GTG1 560 aa9.23□□□□□ -0.93
GABRA1-202ENST00000393943 P4HA2O15460 535 aa9.23□□□□□ -0.93
GABRA1-202ENST00000393943 CCDC22O60826 627 aa9.23□□□□□ -0.93
GABRA1-202ENST00000393943 RFC4P35249 363 aa9.23□□□□□ -0.93
GABRA1-202ENST00000393943 DRG2P55039 364 aaKnown RBP9.23□□□□□ -0.93
GABRA1-202ENST00000393943 POLE2P56282 527 aa9.23□□□□□ -0.93
GABRA1-202ENST00000393943 SESN3P58005 492 aa9.23□□□□□ -0.93
GABRA1-202ENST00000393943 BFSP1Q12934 665 aa9.23□□□□□ -0.93
GABRA1-202ENST00000393943 COL9A3Q14050 684 aaPredicted RBP9.23□□□□□ -0.93
GABRA1-202ENST00000393943 HADHQ16836 314 aaKnown RBP9.23□□□□□ -0.93
GABRA1-202ENST00000393943 FBXO11Q86XK2 927 aa9.23□□□□□ -0.93
GABRA1-202ENST00000393943 TPH2Q8IWU9 490 aa9.23□□□□□ -0.93
GABRA1-202ENST00000393943 LRRC34Q8IZ02 419 aa9.23□□□□□ -0.93
GABRA1-202ENST00000393943 OR2W6PQ8NHA6 318 aa9.23□□□□□ -0.93
GABRA1-202ENST00000393943 PPP4R1Q8TF05 950 aa9.23□□□□□ -0.93
GABRA1-202ENST00000393943 HDAC7Q8WUI4 952 aa9.23□□□□□ -0.93
GABRA1-202ENST00000393943 PIK3C2AO00443 1686 aa9.23□□□□□ -0.93
GABRA1-202ENST00000393943 MST1RQ04912 1400 aa9.23□□□□□ -0.93
GABRA1-202ENST00000393943 LMO7Q8WWI1 1683 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms