RNA–Protein interactions for RNA: ENST00000393043.5

CLTC-202, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best) BASIC

Gene CLTC, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-202ENST00000393043 NFU1Q9UMS0 254 aa13.58□□□□□ -0.23
CLTC-202ENST00000393043 MEGF6O75095 1541 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 USP27XA6NNY8 438 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 TJP3O95049 919 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 OATP04181 439 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 ANXA13P27216 316 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 MARK3P27448 753 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 DRAP1Q14919 205 aaPredicted RBP13.58□□□□□ -0.24
CLTC-202ENST00000393043 CYP4F22Q6NT55 531 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 CDC42EP5Q6NZY7 148 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 DARS2Q6PI48 645 aaKnown RBP13.58□□□□□ -0.24
CLTC-202ENST00000393043 C7orf31Q8N865 590 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 GSDMBQ8TAX9 411 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 DPF2Q92785 391 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 GABBR1Q9UBS5 961 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 ZNRF3Q9ULT6 936 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 CPP00450 1065 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 PHKA2P46019 1235 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 CC2D1AQ6P1N0 951 aaPredicted RBP13.58□□□□□ -0.24
CLTC-202ENST00000393043 RPUSD2Q8IZ73 545 aaKnown RBP13.58□□□□□ -0.24
CLTC-202ENST00000393043 OSBPL9Q96SU4 736 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 ANAPC7Q9UJX3 599 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 PCDHA10Q9Y5I2 948 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 NDUFB10O96000 172 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 CALB1P05937 261 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 NR1D1P20393 614 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 IRX4P78413 519 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 PDE1BQ01064 536 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 INTS5Q6P9B9 1019 aaKnown RBP13.58□□□□□ -0.24
CLTC-202ENST00000393043 BBS5Q8N3I7 341 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 NBPF3Q9H094 633 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 PFDN4Q9NQP4 134 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 PFASO15067 1338 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 ATP8B3O60423 1300 aa13.58□□□□□ -0.24
CLTC-202ENST00000393043 IFNAR2P48551 515 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 FMR1Q06787 632 aaKnown RBP eCLIP13.57□□□□□ -0.243e-7■■■□□ 18.5
CLTC-202ENST00000393043 SLC10A5Q5PT55 438 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 THNSL1Q8IYQ7 743 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 SENP2Q9HC62 589 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 KCND2Q9NZV8 630 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 STRIP2Q9ULQ0 834 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 ADGRB2O60241 1585 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 WDR46O15213 610 aaKnown RBP13.57□□□□□ -0.24
CLTC-202ENST00000393043 EVI5O60447 810 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 SRGNP10124 158 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 ITKQ08881 620 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 IFRD2Q12894 506 aaPredicted RBP13.57□□□□□ -0.24
CLTC-202ENST00000393043 BZW1Q7L1Q6 419 aaKnown RBP13.57□□□□□ -0.24
CLTC-202ENST00000393043 ABI1Q8IZP0 508 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 ENGASEQ8NFI3 743 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 FAM213AQ9BRX8 229 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 MRFAP1Q9Y605 127 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 CTNND1O60716 968 aaKnown RBP13.57□□□□□ -0.24
CLTC-202ENST00000393043 ZRANB2O95218 330 aaKnown RBP eCLIP13.57□□□□□ -0.24
CLTC-202ENST00000393043 NR1I3Q14994 352 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 SWSAP1Q6NVH7 229 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 RSRC2Q7L4I2 434 aaKnown RBP13.57□□□□□ -0.24
CLTC-202ENST00000393043 STK38LQ9Y2H1 464 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 ABL1P00519 1130 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 DYNLT1P63172 113 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 BASP1P80723 227 aaKnown RBP13.57□□□□□ -0.24
CLTC-202ENST00000393043 DMTNQ08495 405 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 SCARA5Q6ZMJ2 495 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 DAGLBQ8NCG7 672 aa13.57□□□□□ -0.24
CLTC-202ENST00000393043 KIAA0391O15091 583 aaKnown RBP13.56□□□□□ -0.24
CLTC-202ENST00000393043 SRGAP2O75044 1071 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 HIP1RO75146 1068 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 AP3M2P53677 418 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 CCZ1BP86790 482 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 CCZ1P86791 482 aaPredicted RBP13.56□□□□□ -0.24
CLTC-202ENST00000393043 TROAPQ12815 778 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 TTC19Q6DKK2 380 aaPredicted RBP13.56□□□□□ -0.24
CLTC-202ENST00000393043 CENPUQ71F23 418 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 PDIK1LQ8N165 341 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 SIX6OS1Q8N1H7 587 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 TTC13Q8NBP0 860 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 CCDC68Q9H2F9 335 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 SH3BP5O60239 455 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 PHLDB3Q6NSJ2 640 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 HAUS6Q7Z4H7 955 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 TOPORSQ9NS56 1045 aaPredicted RBP13.56□□□□□ -0.24
CLTC-202ENST00000393043 NOVA2Q9UNW9 492 aaKnown RBP13.56□□□□□ -0.24
CLTC-202ENST00000393043 AFG3L2Q9Y4W6 797 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 ACTN1P12814 892 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 PSMA2P25787 234 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 CAV1Q03135 178 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 CCDC38Q502W7 563 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 TRIM72Q6ZMU5 477 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 CATSPER4Q7RTX7 472 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 TTC39CQ8N584 583 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 SCYL1Q96KG9 808 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 MROH1Q8NDA8 1641 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 MYBL1P10243 752 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 PPP2R5CQ13362 524 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 SMIM5Q71RC9 77 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 CCNYQ8ND76 341 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 NWD1Q149M9 1564 aa13.56□□□□□ -0.24
CLTC-202ENST00000393043 EXOC1LA0A1B0GW35 172 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 SSU72P8A0A1W2PR75 194 aa13.55□□□□□ -0.24
CLTC-202ENST00000393043 SLC8A1P32418 973 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms