RNA–Protein interactions for RNA: ENST00000392981.6

XRN1-202, Transcript of 5'-3' exoribonuclease 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene XRN1, Length 5,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-202ENST00000392981 ADPGKQ9BRR6 497 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 ISCA1Q9BUE6 129 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 CARD10Q9BWT7 1032 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 TSPY26PQ9H489 355 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 NKIRAS2Q9NYR9 191 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 CHORDC1Q9UHD1 332 aaPredicted RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 GPR45Q9Y5Y3 372 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 SLC12A8A0AV02 714 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 KRT87PA6NCN2 255 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 ALDH2P05091 517 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 IL6STP40189 918 aaPredicted RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 GRM5P41594 1212 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 LIFRP42702 1097 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 ALDH9A1P49189 494 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 ZBTB16Q05516 673 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 CUL4AQ13619 759 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 PRAMEF9Q5VWM5 478 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 CYP26C1Q6V0L0 522 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 RASGRP2Q7LDG7 609 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 LYSMD3Q7Z3D4 306 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 DPP9Q86TI2 863 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 CREG2Q8IUH2 290 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 THEMISQ8N1K5 641 aaPredicted RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 PANK1Q8TE04 598 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 SMCR8Q8TEV9 937 aaPredicted RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 KAT5Q92993 513 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 NXPE3Q969Y0 559 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 EAF2Q96CJ1 260 aaPredicted RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 NUP88Q99567 741 aaPredicted RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 A6NNZ2 444 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 LGALS16A8MUM7 142 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 SLITRK5O94991 958 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 KIF20AO95235 890 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 ECEL1O95672 775 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 GUCA1CO95843 209 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 AFF3P51826 1226 aaKnown RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 IRX3P78415 501 aaPredicted RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 INTS11Q5TA45 600 aaKnown RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 OVCH2Q7RTZ1 564 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 SDCCAG8Q86SQ7 713 aaPredicted RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 FAM43AQ8N2R8 423 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 NANOS1Q8WY41 292 aaKnown RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 KIFC2Q96AC6 838 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 APOL6Q9BWW8 343 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 SLC13A1Q9BZW2 595 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 ACAD9Q9H845 621 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 SMYD2Q9NRG4 433 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 GFOD1Q9NXC2 390 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 CGGBP1Q9UFW8 167 aaPredicted RBP3.95□□□□□ -1.78
XRN1-202ENST00000392981 ZNF451Q9Y4E5 1061 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 PCDHA13Q9Y5I0 950 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 SMARCA4P51532 1647 aa3.95□□□□□ -1.78
XRN1-202ENST00000392981 A0A1W2PQ27 194 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 A0A1W2PQ64 194 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 A0A1W2PQC6 194 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 A0A1W2PQD8 194 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 A0A1W2PQJ5 194 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 PRAMEF25A6NGN4 478 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 KIAA0754O94854 1291 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 APBA3O96018 575 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 TMEM253P0C7T8 217 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 COL6A2P12110 1019 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 GLULP15104 373 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 ATP5F1P24539 256 aaPredicted RBP3.94□□□□□ -1.78
XRN1-202ENST00000392981 AARSP49588 968 aaKnown RBP eCLIP3.94□□□□□ -1.78
XRN1-202ENST00000392981 UBXN2AP68543 259 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 NOMO1Q15155 1222 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 FAM205BPQ63HN1 556 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 USP45Q70EL2 814 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 RTN4RL1Q86UN2 441 aaPredicted RBP3.94□□□□□ -1.78
XRN1-202ENST00000392981 TMEM192Q8IY95 271 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 TOR1AIP2Q8NFQ8 470 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 DDX11Q96FC9 970 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 ADI1Q9BV57 179 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 KCNQ5Q9NR82 932 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 ARGLU1Q9NWB6 273 aaPredicted RBP3.94□□□□□ -1.78
XRN1-202ENST00000392981 GGA3Q9NZ52 723 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 CLEC1BQ9P126 229 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 RNF112Q9ULX5 631 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 FAM47E-STBD1D6RA91 191 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 SPTLC2O15270 562 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 B3GALT2O43825 422 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 TNFRSF6BO95407 300 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 BPIP17213 487 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 ALOX12P18054 663 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 RPS6KB1P23443 525 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 SLC5A3P53794 718 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 KRT83P78385 493 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 CAMK2DQ13557 499 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 ANKRD1Q15327 319 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 SPOUT1Q5T280 376 aaKnown RBP3.94□□□□□ -1.78
XRN1-202ENST00000392981 ADGRD1Q6QNK2 874 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 C16orf54Q6UWD8 224 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 RNF44Q7L0R7 432 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 R3HCC1LQ7Z5L2 792 aaKnown RBP3.94□□□□□ -1.78
XRN1-202ENST00000392981 JMYQ8N9B5 988 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 CTCFLQ8NI51 663 aaPredicted RBP3.94□□□□□ -1.78
XRN1-202ENST00000392981 HPS3Q969F9 1004 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 RILPL2Q969X0 211 aa3.94□□□□□ -1.78
XRN1-202ENST00000392981 GAL3ST3Q96A11 431 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms