RNA–Protein interactions for RNA: ENST00000391827.2

NLRP3-205, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 2,940 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-205ENST00000391827 ICAM1P05362 532 aa11.77□□□□□ -0.52
NLRP3-205ENST00000391827 ARP10275 920 aa11.77□□□□□ -0.52
NLRP3-205ENST00000391827 MAPK7Q13164 816 aa11.77□□□□□ -0.52
NLRP3-205ENST00000391827 ALCAMQ13740 583 aa11.77□□□□□ -0.52
NLRP3-205ENST00000391827 RPS6KA1Q15418 735 aa11.77□□□□□ -0.52
NLRP3-205ENST00000391827 MREGQ8N565 214 aa11.77□□□□□ -0.52
NLRP3-205ENST00000391827 LMBR1Q8WVP7 490 aa11.77□□□□□ -0.52
NLRP3-205ENST00000391827 ZBED3Q96IU2 234 aaPredicted RBP11.77□□□□□ -0.52
NLRP3-205ENST00000391827 CALR3Q96L12 384 aaKnown RBP11.77□□□□□ -0.52
NLRP3-205ENST00000391827 F8VZ95 297 aa11.77□□□□□ -0.53
NLRP3-205ENST00000391827 DDX3XO00571 662 aaKnown RBP eCLIP11.77□□□□□ -0.53
NLRP3-205ENST00000391827 CHMP2AO43633 222 aa11.77□□□□□ -0.53
NLRP3-205ENST00000391827 IVLP07476 585 aa11.77□□□□□ -0.53
NLRP3-205ENST00000391827 SOX5P35711 763 aa11.77□□□□□ -0.53
NLRP3-205ENST00000391827 MATR3P43243 847 aaKnown RBP eCLIP11.77□□□□□ -0.53
NLRP3-205ENST00000391827 SLC7A5Q01650 507 aa11.77□□□□□ -0.53
NLRP3-205ENST00000391827 ZC2HC1CQ53FD0 456 aaPredicted RBP11.77□□□□□ -0.53
NLRP3-205ENST00000391827 LEKR1Q6ZMV7 388 aa11.77□□□□□ -0.53
NLRP3-205ENST00000391827 SAMD3Q8N6K7 520 aa11.77□□□□□ -0.53
NLRP3-205ENST00000391827 AGBL3Q8NEM8 1001 aa11.77□□□□□ -0.53
NLRP3-205ENST00000391827 TPCN2Q8NHX9 752 aa11.77□□□□□ -0.53
NLRP3-205ENST00000391827 TAF4BQ92750 862 aa11.77□□□□□ -0.53
NLRP3-205ENST00000391827 LXNQ9BS40 222 aa11.77□□□□□ -0.53
NLRP3-205ENST00000391827 FRMD4BQ9Y2L6 1034 aa11.77□□□□□ -0.53
NLRP3-205ENST00000391827 NCANO14594 1321 aa11.77□□□□□ -0.53
NLRP3-205ENST00000391827 BHMG1C9JSJ3 638 aaPredicted RBP11.76□□□□□ -0.53
NLRP3-205ENST00000391827 GOLGA8KD6RF30 607 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 SHOX2O60902 331 aaPredicted RBP11.76□□□□□ -0.53
NLRP3-205ENST00000391827 PHACTR2O75167 634 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 H2AFZP0C0S5 128 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 MCCD1P59942 119 aaPredicted RBP11.76□□□□□ -0.53
NLRP3-205ENST00000391827 TNNC1P63316 161 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 PAK2Q13177 524 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 H2AFVQ71UI9 128 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 C12orf56Q8IXR9 622 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 MAP3K20Q9NYL2 800 aaKnown RBP11.76□□□□□ -0.53
NLRP3-205ENST00000391827 SUCLA2Q9P2R7 463 aaPredicted RBP11.76□□□□□ -0.53
NLRP3-205ENST00000391827 DBR1Q9UK59 544 aaKnown RBP11.76□□□□□ -0.53
NLRP3-205ENST00000391827 STXBP5LQ9Y2K9 1186 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 ZNF536O15090 1300 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 ZBTB39O15060 712 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 OPA1O60313 960 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 LYPLA2O95372 231 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 GLI1P08151 1106 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 ASNSP08243 561 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 LMNB1P20700 586 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 ODR4Q5SWX8 454 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 SRLQ86TD4 932 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 SYCE1Q8N0S2 351 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 DAW1Q8N136 415 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 SCFD2Q8WU76 684 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 GDAP1L1Q96MZ0 367 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 KIF1CO43896 1103 aaKnown RBP11.76□□□□□ -0.53
NLRP3-205ENST00000391827 EVI5O60447 810 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 HEXIM1O94992 359 aaKnown RBP11.76□□□□□ -0.53
NLRP3-205ENST00000391827 ITGB5P18084 799 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 ENOX2Q16206 610 aaKnown RBP11.76□□□□□ -0.53
NLRP3-205ENST00000391827 SLC30A10Q6XR72 485 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 CCDC91Q7Z6B0 441 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 RASGEF1CQ8N431 466 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 TTLL6Q8N841 843 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 VTI1AQ96AJ9 217 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 GPR88Q9GZN0 384 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 DONSONQ9NYP3 566 aa11.76□□□□□ -0.53
NLRP3-205ENST00000391827 ARHGEF35A5YM69 484 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 DHX15O43143 795 aaKnown RBP11.75□□□□□ -0.53
NLRP3-205ENST00000391827 PPFIA1Q13136 1202 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 COG2Q14746 738 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 ST6GALNAC4Q9H4F1 302 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 PACSIN2Q9UNF0 486 aaPredicted RBP11.75□□□□□ -0.53
NLRP3-205ENST00000391827 MAPK13O15264 365 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 P4HA2O15460 535 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 HIP1RO75146 1068 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 RAD17O75943 681 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 P4HBP07237 508 aaKnown RBP11.75□□□□□ -0.53
NLRP3-205ENST00000391827 TMEM253P0C7T8 217 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 SNRPFP62306 86 aaKnown RBP11.75□□□□□ -0.53
NLRP3-205ENST00000391827 UBXN2AP68543 259 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 SATB1Q01826 763 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 BFSP1Q12934 665 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 TTC31Q49AM3 519 aaPredicted RBP11.75□□□□□ -0.53
NLRP3-205ENST00000391827 GJB7Q6PEY0 223 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 MCF2L2Q86YR7 1114 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 LNX1Q8TBB1 728 aaPredicted RBP11.75□□□□□ -0.53
NLRP3-205ENST00000391827 WHAMMQ8TF30 809 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 CLEC4DQ8WXI8 215 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 RIN2Q8WYP3 895 aaPredicted RBP11.75□□□□□ -0.53
NLRP3-205ENST00000391827 TIPINQ9BVW5 301 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 TMEM39BQ9GZU3 492 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 INTS2Q9H0H0 1204 aaKnown RBP11.75□□□□□ -0.53
NLRP3-205ENST00000391827 TMEM206Q9H813 350 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 POLD4Q9HCU8 107 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 GINM1Q9NU53 330 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 APEX2Q9UBZ4 518 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 DNAJC12Q9UKB3 198 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 UBIAD1Q9Y5Z9 338 aa11.75□□□□□ -0.53
NLRP3-205ENST00000391827 KCNK3O14649 394 aa11.74□□□□□ -0.53
NLRP3-205ENST00000391827 WDR46O15213 610 aaKnown RBP11.74□□□□□ -0.53
NLRP3-205ENST00000391827 PMM2O15305 246 aa11.74□□□□□ -0.53
NLRP3-205ENST00000391827 KIF22Q14807 665 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms