RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 UCHL3P15374 230 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 VCAM1P19320 739 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 AP3B2Q13367 1082 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 ODR4Q5SWX8 454 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 KLHDC7AQ5VTJ3 777 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 GBP6Q6ZN66 633 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 PEX26Q7Z412 305 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 TRIM59Q8IWR1 403 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 SH2D3CQ8N5H7 860 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 LENG9Q96B70 501 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 HOOK2Q96ED9 719 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 CEP63Q96MT8 703 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 GCOM1H8Y6P7 765 aaPredicted RBP13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 EML1O00423 815 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 POLR2MP0CAP2 368 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 HMGCS2P54868 508 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 GIT2Q14161 759 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 SLC18A3Q16572 532 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 PURBQ96QR8 312 aaKnown RBP13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 NUCKS1Q9H1E3 243 aaKnown RBP13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 RPAP3Q9H6T3 665 aaPredicted RBP13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 KCNMB3Q9NPA1 279 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 ZNF536O15090 1300 aa13.17□□□□□ -0.3
CAPRIN1-202ENST00000389645 KRT14P02533 472 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 SREBF1P36956 1147 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 IFT20Q8IY31 132 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 PRPF38AQ8NAV1 312 aaKnown RBP13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 SYNPO2Q9UMS6 1093 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 SUFUQ9UMX1 484 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 SORBS3O60504 671 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 NOL4O94818 638 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 FAM160B2Q86V87 743 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 FAM186BQ8IYM0 893 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 KIAA1683Q9H0B3 1180 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 CXorf56Q9H5V9 222 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 PTPRAP18433 802 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 CDK17Q00537 523 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 COG2Q14746 738 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 TRADDQ15628 312 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 MUM1L1Q5H9M0 696 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 HGSNATQ68CP4 663 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 SRLQ86TD4 932 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 ETNPPLQ8TBG4 499 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 PICK1Q9NRD5 415 aa13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 CHORDC1Q9UHD1 332 aaPredicted RBP13.16□□□□□ -0.3
CAPRIN1-202ENST00000389645 SSU72P8A0A1W2PR75 194 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 ARHGEF35A5YM69 484 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 FOSP01100 380 aaPredicted RBP13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 IVLP07476 585 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 GLI1P08151 1106 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 GNGT1P63211 74 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 CNKSR2Q8WXI2 1034 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 DDX47Q9H0S4 455 aaKnown RBP13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 COL20A1Q9P218 1284 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 FRMD4BQ9Y2L6 1034 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 CYP3A7-CYP3A51PA0A087WV96 503 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 TARSL2A2RTX5 802 aaKnown RBP13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 GOLGA6L10A6NI86 522 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 ADM5C9JUS6 153 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 PEX10O60683 326 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 SYF2O95926 243 aaKnown RBP13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 H2AFZP0C0S5 128 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 CYP3A7P24462 503 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 RPA1P27694 616 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 SLC12A3P55017 1021 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 PPP2R5AQ15172 486 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 DCAF15Q66K64 600 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 H2AFVQ71UI9 128 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 ZNF571Q7Z3V5 609 aaPredicted RBP13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 DDX42Q86XP3 938 aaKnown RBP eCLIP13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 ZNF577Q9BSK1 485 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 WDR18Q9BV38 432 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 UBXN6Q9BZV1 441 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 DPH5Q9H2P9 285 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 MRPL11Q9Y3B7 192 aaKnown RBP13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 OPA1O60313 960 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 STAT1P42224 750 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 CCT5P48643 541 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 TNNC1P63316 161 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 GLYCTKQ8IVS8 523 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 SCYL3Q8IZE3 742 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 ATG4CQ96DT6 458 aa13.15□□□□□ -0.3
CAPRIN1-202ENST00000389645 WDR46O15213 610 aaKnown RBP13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 APOBEC3FQ8IUX4 373 aaKnown RBP13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 RIPK3Q9Y572 518 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 ABCB11O95342 1321 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 PIK3CDO00329 1044 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 MYCLP12524 364 aaPredicted RBP13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 EPHB4P54760 987 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 BACE1P56817 501 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 ZCWPW2Q504Y3 356 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 C9orf131Q5VYM1 1079 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 ZNF280CQ8ND82 737 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 BCAS4Q8TDM0 211 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 UBLCP1Q8WVY7 318 aaPredicted RBP13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 KLRG1Q96E93 195 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 KCTD10Q9H3F6 313 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 PARVGQ9HBI0 331 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 SMIM23A6NLE4 172 aa13.14□□□□□ -0.31
CAPRIN1-202ENST00000389645 KRIT1O00522 736 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms