RNA–Protein interactions for RNA: ENST00000389589.8

SHOX2-201, Transcript of short stature homeobox 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHOX2, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-201ENST00000389589 IRX2Q9BZI1 471 aaPredicted RBP27.6■■■□□ 2.01
SHOX2-201ENST00000389589 GANQ9H2C0 597 aa27.6■■■□□ 2.01
SHOX2-201ENST00000389589 ARHGAP20Q9P2F6 1191 aa27.6■■■□□ 2.01
SHOX2-201ENST00000389589 ZNF215Q9UL58 517 aaPredicted RBP27.6■■■□□ 2.01
SHOX2-201ENST00000389589 IGSF9BQ9UPX0 1349 aa27.59■■■□□ 2.01
SHOX2-201ENST00000389589 ATG7O95352 703 aa27.59■■■□□ 2.01
SHOX2-201ENST00000389589 PEX3P56589 373 aa27.59■■■□□ 2.01
SHOX2-201ENST00000389589 SP2Q02086 613 aa27.59■■■□□ 2.01
SHOX2-201ENST00000389589 PPP2R5AQ15172 486 aa27.59■■■□□ 2.01
SHOX2-201ENST00000389589 SPA17Q15506 151 aa27.59■■■□□ 2.01
SHOX2-201ENST00000389589 ZNF569Q5MCW4 686 aa27.59■■■□□ 2.01
SHOX2-201ENST00000389589 SFMBT2Q5VUG0 894 aa27.59■■■□□ 2.01
SHOX2-201ENST00000389589 SEPT14Q6ZU15 432 aa27.59■■■□□ 2.01
SHOX2-201ENST00000389589 KIAA1328Q86T90 577 aa27.59■■■□□ 2.01
SHOX2-201ENST00000389589 NLRC4Q9NPP4 1024 aa27.59■■■□□ 2.01
SHOX2-201ENST00000389589 RBPJLQ9UBG7 517 aa27.59■■■□□ 2.01
SHOX2-201ENST00000389589 DGAT1O75907 488 aa27.58■■■□□ 2.01
SHOX2-201ENST00000389589 CYP2J2P51589 502 aa27.58■■■□□ 2.01
SHOX2-201ENST00000389589 PRKCEQ02156 737 aa27.58■■■□□ 2.01
SHOX2-201ENST00000389589 SP4Q02446 784 aa27.58■■■□□ 2.01
SHOX2-201ENST00000389589 GPAT2Q6NUI2 795 aa27.58■■■□□ 2.01
SHOX2-201ENST00000389589 TRMT1LQ7Z2T5 733 aaKnown RBP27.58■■■□□ 2.01
SHOX2-201ENST00000389589 MCPH1Q8NEM0 835 aa27.58■■■□□ 2.01
SHOX2-201ENST00000389589 TSC1Q92574 1164 aa27.58■■■□□ 2.01
SHOX2-201ENST00000389589 ZNFX1Q9P2E3 1918 aaKnown RBP27.58■■■□□ 2.01
SHOX2-201ENST00000389589 SSU72P8A0A1W2PR75 194 aa27.58■■■□□ 2.01
SHOX2-201ENST00000389589 FSTL1Q12841 308 aa27.58■■■□□ 2.01
SHOX2-201ENST00000389589 MAPK8IP2Q13387 824 aaPredicted RBP27.58■■■□□ 2.01
SHOX2-201ENST00000389589 XKR3Q5GH77 459 aa27.58■■■□□ 2.01
SHOX2-201ENST00000389589 CYFIP1Q7L576 1253 aa27.58■■■□□ 2.01
SHOX2-201ENST00000389589 SLC10A4Q96EP9 437 aa27.58■■■□□ 2.01
SHOX2-201ENST00000389589 DEF6Q9H4E7 631 aa27.58■■■□□ 2.01
SHOX2-201ENST00000389589 GPRC5CQ9NQ84 441 aa27.58■■■□□ 2.01
SHOX2-201ENST00000389589 KRT86O43790 486 aa27.57■■■□□ 2
SHOX2-201ENST00000389589 LCA5LO95447 670 aa27.57■■■□□ 2
SHOX2-201ENST00000389589 TGFB3P10600 412 aa27.57■■■□□ 2
SHOX2-201ENST00000389589 DMP1Q13316 513 aaPredicted RBP27.57■■■□□ 2
SHOX2-201ENST00000389589 SPIRE2Q8WWL2 714 aa27.57■■■□□ 2
SHOX2-201ENST00000389589 EXOC7Q9UPT5 735 aa27.57■■■□□ 2
SHOX2-201ENST00000389589 EXOC3O60645 756 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 EIF4A3P38919 411 aaKnown RBP27.56■■■□□ 2
SHOX2-201ENST00000389589 SLC9C1Q4G0N8 1177 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 GTF3C2Q8WUA4 911 aaPredicted RBP27.56■■■□□ 2
SHOX2-201ENST00000389589 TXNRD2Q9NNW7 524 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 SEPT9Q9UHD8 586 aaPredicted RBP27.56■■■□□ 2
SHOX2-201ENST00000389589 FBXL5Q9UKA1 691 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 CLEC11AQ9Y240 323 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 SYNGAP1Q96PV0 1343 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 SLC16A4O15374 487 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 SERPING1P05155 500 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 PON1P27169 355 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 KIF11P52732 1056 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 RTP1P59025 263 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 NEDD9Q14511 834 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 EHBP1Q8NDI1 1231 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 JAKMIP2Q96AA8 810 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 TSGA10Q9BZW7 698 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 MROH8Q9H579 483 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 ZNF302Q9NR11 478 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 PDLIM7Q9NR12 457 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 CYP26B1Q9NR63 512 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 PNMA3Q9UL41 463 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 MYO6Q9UM54 1294 aa27.56■■■□□ 2
SHOX2-201ENST00000389589 MAFBQ9Y5Q3 323 aaPredicted RBP27.56■■■□□ 2
SHOX2-201ENST00000389589 PLEKP08567 350 aaPredicted RBP27.55■■■□□ 2
SHOX2-201ENST00000389589 TUBB2AQ13885 445 aa27.55■■■□□ 2
SHOX2-201ENST00000389589 CCDC122Q5T0U0 273 aa27.55■■■□□ 2
SHOX2-201ENST00000389589 KLHDC7AQ5VTJ3 777 aa27.55■■■□□ 2
SHOX2-201ENST00000389589 DPY19L2P1Q6NXN4 242 aa27.55■■■□□ 2
SHOX2-201ENST00000389589 NTPCRQ9BSD7 190 aaKnown RBP27.55■■■□□ 2
SHOX2-201ENST00000389589 TUBB2BQ9BVA1 445 aa27.55■■■□□ 2
SHOX2-201ENST00000389589 AIPL1Q9NZN9 384 aa27.55■■■□□ 2
SHOX2-201ENST00000389589 TELO2Q9Y4R8 837 aa27.55■■■□□ 2
SHOX2-201ENST00000389589 AKR1B10O60218 316 aa27.55■■■□□ 2
SHOX2-201ENST00000389589 SLC9A1P19634 815 aa27.55■■■□□ 2
SHOX2-201ENST00000389589 UBA1P22314 1058 aaKnown RBP27.55■■■□□ 2
SHOX2-201ENST00000389589 GJA5P36382 358 aa27.55■■■□□ 2
SHOX2-201ENST00000389589 VAV2P52735 878 aa27.55■■■□□ 2
SHOX2-201ENST00000389589 KCTD2Q14681 263 aa27.55■■■□□ 2
SHOX2-201ENST00000389589 ATP6V0A4Q9HBG4 840 aa27.55■■■□□ 2
SHOX2-201ENST00000389589 KCNG1Q9UIX4 513 aa27.55■■■□□ 2
SHOX2-201ENST00000389589 GUCA1BQ9UMX6 200 aa27.55■■■□□ 2
SHOX2-201ENST00000389589 CTAGE9A4FU28 777 aa27.54■■■□□ 2
SHOX2-201ENST00000389589 ABL1P00519 1130 aa27.54■■■□□ 2
SHOX2-201ENST00000389589 NPTX2P47972 431 aa27.54■■■□□ 2
SHOX2-201ENST00000389589 HGSNATQ68CP4 663 aa27.54■■■□□ 2
SHOX2-201ENST00000389589 SLC35F6Q8N357 371 aa27.54■■■□□ 2
SHOX2-201ENST00000389589 TMEM161BQ8NDZ6 487 aa27.54■■■□□ 2
SHOX2-201ENST00000389589 MRFAP1Q9Y605 127 aa27.54■■■□□ 2
SHOX2-201ENST00000389589 CCDC169A6NNP5 214 aa27.53■■■□□ 2
SHOX2-201ENST00000389589 MAPK13O15264 365 aa27.53■■■□□ 2
SHOX2-201ENST00000389589 UCHL3P15374 230 aa27.53■■■□□ 2
SHOX2-201ENST00000389589 NCBP1Q09161 790 aaKnown RBP27.53■■■□□ 2
SHOX2-201ENST00000389589 KCNV1Q6PIU1 500 aa27.53■■■□□ 2
SHOX2-201ENST00000389589 TXLNBQ8N3L3 684 aa27.53■■■□□ 2
SHOX2-201ENST00000389589 SHCBP1Q8NEM2 672 aa27.53■■■□□ 2
SHOX2-201ENST00000389589 MMP19Q99542 508 aa27.53■■■□□ 2
SHOX2-201ENST00000389589 KMT5AQ9NQR1 393 aa27.53■■■□□ 2
SHOX2-201ENST00000389589 GCNT4Q9P109 453 aa27.53■■■□□ 2
SHOX2-201ENST00000389589 IGKV6D-21A0A0A0MT36 114 aa27.53■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms