RNA–Protein interactions for RNA: ENST00000389418.8

PTPRN2-203, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-203ENST00000389418 CDC42EP1Q00587 391 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 PLCB4Q15147 1175 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 FAM117BQ6P1L5 589 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 GUF1Q8N442 669 aaKnown RBP13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 MMP19Q99542 508 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 LXNQ9BS40 222 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 ZNF302Q9NR11 478 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 ATP8B1O43520 1251 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 SLURP2P0DP57 97 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 ATP11AP98196 1134 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 ALKBH5Q6P6C2 394 aaKnown RBP13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 ATG4CQ96DT6 458 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 DAAM1Q9Y4D1 1078 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 POLR1AO95602 1720 aaPredicted RBP13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 DENND3A2RUS2 1198 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 MCF2LO15068 1137 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 CELF2O95319 508 aaKnown RBP13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 MYBP10242 640 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 AP3M2P53677 418 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 ATP2C1P98194 919 aaPredicted RBP13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 C9orf131Q5VYM1 1079 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 RFX6Q8HWS3 928 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 PDLIM2Q96JY6 352 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 GPBP1L1Q9HC44 474 aaPredicted RBP13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 PRR12Q9ULL5 1215 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 ITSN1Q15811 1721 aa13.97□□□□□ -0.17
PTPRN2-203ENST00000389418 LGALS16A8MUM7 142 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 TBX3O15119 743 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 DYNC1LI2O43237 492 aaPredicted RBP13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 TRIM49P0CI25 452 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 TRIM49CP0CI26 452 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 ANXA13P27216 316 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 INPP5BP32019 993 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 ZNF543Q08ER8 600 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 NAALADL2Q58DX5 795 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 RASGRP2Q7LDG7 609 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 OR6B3Q8NGW1 331 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 TEX13BQ9BXU2 312 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 DIS3Q9Y2L1 958 aaKnown RBP13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 HEXIM1O94992 359 aaKnown RBP13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 C6orf222P0C671 652 aaPredicted RBP13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 TXNP10599 105 aaKnown RBP13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 MCUR1Q96AQ8 359 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 CPSF3Q9UKF6 684 aaKnown RBP13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 TEX33O43247 280 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 NR3C1P04150 777 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 ARL13BQ3SXY8 428 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 CEP55Q53EZ4 464 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 MFSD14CQ5VZR4 134 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 MAP1SQ66K74 1059 aaPredicted RBP13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 CDR2LQ86X02 465 aaPredicted RBP13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 EFCAB13Q8IY85 973 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 MTRQ99707 1265 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 CALN1Q9BXU9 219 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 EPB41L5Q9HCM4 733 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 PCDHA13Q9Y5I0 950 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 PCDHA10Q9Y5I2 948 aa13.96□□□□□ -0.17
PTPRN2-203ENST00000389418 PDS5AQ29RF7 1337 aaKnown RBP13.96□□□□□ -0.18
PTPRN2-203ENST00000389418 TPD52P55327 224 aaPredicted RBP13.96□□□□□ -0.18
PTPRN2-203ENST00000389418 GNGT1P63211 74 aa13.96□□□□□ -0.18
PTPRN2-203ENST00000389418 TTC31Q49AM3 519 aaPredicted RBP13.96□□□□□ -0.18
PTPRN2-203ENST00000389418 SLC30A10Q6XR72 485 aa13.96□□□□□ -0.18
PTPRN2-203ENST00000389418 DSTYKQ6XUX3 929 aa13.96□□□□□ -0.18
PTPRN2-203ENST00000389418 TUFT1Q9NNX1 390 aa13.96□□□□□ -0.18
PTPRN2-203ENST00000389418 CEP72Q9P209 647 aa13.96□□□□□ -0.18
PTPRN2-203ENST00000389418 PRPSAP2O60256 369 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 KNOP1Q1ED39 458 aaKnown RBP13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 OR6B2Q6IFH4 312 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 ZNF746Q6NUN9 644 aaPredicted RBP13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 ENOSF1Q7L5Y1 443 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 TMEM35BQ8NCS4 154 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 ZNF280CQ8ND82 737 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 RNF139Q8WU17 664 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 PXDNQ92626 1479 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 TBXAS1P24557 533 aaPredicted RBP13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 ELF1P32519 619 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 CIITAP33076 1130 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 EFNA5P52803 228 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 CXCL9Q07325 125 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 HEXIM2Q96MH2 286 aaKnown RBP13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 SLC4A9Q96Q91 983 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 ECEL1O95672 775 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 SRGNP10124 158 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 ZNF18P17022 549 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 ZNF568Q3ZCX4 644 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 SGO2Q562F6 1265 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 GKAP1Q5VSY0 366 aaPredicted RBP13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 KCTD16Q68DU8 428 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 METTL16Q86W50 562 aaKnown RBP13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 SPATS2Q86XZ4 545 aaKnown RBP13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 AGBL3Q8NEM8 1001 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 TTC1Q99614 292 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 PRDM5Q9NQX1 630 aaPredicted RBP13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 FBXO2Q9UK22 296 aaPredicted RBP13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 C3P01024 1663 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 MIF4GDA9UHW6 222 aaKnown RBP13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 GGPS1O95749 300 aa13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 FDPSP14324 419 aaKnown RBP13.95□□□□□ -0.18
PTPRN2-203ENST00000389418 CCDC13Q8IYE1 715 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms