RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 MYBP10242 640 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 FGFR4P22455 802 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 KLRC2P26717 231 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 ZNF76P36508 570 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 SLC26A2P50443 739 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 CLCN3P51790 818 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 NLRP11P59045 1033 aaKnown RBP10.98□□□□□ -0.65
IFT88-203ENST00000389373 TBC1D8BQ0IIM8 1120 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 ITGB3BPQ13352 177 aaPredicted RBP10.98□□□□□ -0.65
IFT88-203ENST00000389373 SWSAP1Q6NVH7 229 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 GPR149Q86SP6 731 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 SRBD1Q8N5C6 995 aaKnown RBP10.98□□□□□ -0.65
IFT88-203ENST00000389373 NCOA7Q8NI08 942 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 SCLT1Q96NL6 688 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 ZBP1Q9H171 429 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 SFXN1Q9H9B4 322 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 TBC1D17Q9HA65 648 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 AGO4Q9HCK5 861 aaKnown RBP10.98□□□□□ -0.65
IFT88-203ENST00000389373 DLL3Q9NYJ7 618 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 NFASCO94856 1347 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 RIF1Q5UIP0 2472 aaKnown RBP10.98□□□□□ -0.65
IFT88-203ENST00000389373 LAMA4Q16363 1823 aa10.98□□□□□ -0.65
IFT88-203ENST00000389373 DCHS1Q96JQ0 3298 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 MYO15AQ9UKN7 3530 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 ATG7O95352 703 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 CYP21A2P08686 494 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 CTSAP10619 480 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 GIT2Q14161 759 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 NONOQ15233 471 aaKnown RBP eCLIP10.97□□□□□ -0.65
IFT88-203ENST00000389373 LETM2Q2VYF4 491 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 MIS18BP1Q6P0N0 1132 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 ABHD15Q6UXT9 468 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 NFXL1Q6ZNB6 911 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 HEATR3Q7Z4Q2 680 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 PPFIBP1Q86W92 1011 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 TMEM173Q86WV6 379 aaPredicted RBP10.97□□□□□ -0.65
IFT88-203ENST00000389373 RAB11FIP4Q86YS3 637 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 CCDC60Q8IWA6 550 aaPredicted RBP10.97□□□□□ -0.65
IFT88-203ENST00000389373 PLEKHM2Q8IWE5 1019 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 ZNF654Q8IZM8 581 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 MRPL9Q9BYD2 267 aaKnown RBP10.97□□□□□ -0.65
IFT88-203ENST00000389373 GBP3Q9H0R5 595 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 IL25Q9H293 177 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 IGSF9Q9P2J2 1179 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 NCDNQ9UBB6 729 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 WNT16Q9UBV4 365 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 SIT1Q9Y3P8 196 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 U3KPZ7 1027 aaPredicted RBP10.97□□□□□ -0.65
IFT88-203ENST00000389373 COL1A2P08123 1366 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 CACNA1AO00555 2505 aa10.97□□□□□ -0.65
IFT88-203ENST00000389373 E7EWF7 191 aa10.96□□□□□ -0.65
IFT88-203ENST00000389373 C22orf31O95567 290 aa10.96□□□□□ -0.65
IFT88-203ENST00000389373 CCNE2O96020 404 aa10.96□□□□□ -0.65
IFT88-203ENST00000389373 RXRAP19793 462 aa10.96□□□□□ -0.65
IFT88-203ENST00000389373 ATP4AP20648 1035 aa10.96□□□□□ -0.65
IFT88-203ENST00000389373 GNAQP50148 359 aa10.96□□□□□ -0.65
IFT88-203ENST00000389373 RNASELQ05823 741 aaKnown RBP10.96□□□□□ -0.65
IFT88-203ENST00000389373 EFCAB12Q6NXP0 572 aa10.96□□□□□ -0.65
IFT88-203ENST00000389373 DDX53Q86TM3 631 aaKnown RBP10.96□□□□□ -0.65
IFT88-203ENST00000389373 C1orf210Q8IVY1 113 aa10.96□□□□□ -0.65
IFT88-203ENST00000389373 SLC44A3Q8N4M1 653 aa10.96□□□□□ -0.65
IFT88-203ENST00000389373 LRRC71Q8N4P6 559 aa10.96□□□□□ -0.65
IFT88-203ENST00000389373 ST13P5Q8NFI4 369 aaPredicted RBP10.96□□□□□ -0.65
IFT88-203ENST00000389373 IGDCC4Q8TDY8 1250 aa10.96□□□□□ -0.65
IFT88-203ENST00000389373 KLHL5Q96PQ7 755 aa10.96□□□□□ -0.65
IFT88-203ENST00000389373 MAP7D2Q96T17 732 aa10.96□□□□□ -0.65
IFT88-203ENST00000389373 LZTS2Q9BRK4 669 aa10.96□□□□□ -0.65
IFT88-203ENST00000389373 EMILIN2Q9BXX0 1053 aa10.96□□□□□ -0.65
IFT88-203ENST00000389373 INPP5FQ9Y2H2 1132 aa10.96□□□□□ -0.65
IFT88-203ENST00000389373 TAF6LQ9Y6J9 622 aa10.96□□□□□ -0.65
IFT88-203ENST00000389373 IGKV6D-21A0A0A0MT36 114 aa10.95□□□□□ -0.66
IFT88-203ENST00000389373 ZBTB42B2RXF5 422 aa10.95□□□□□ -0.66
IFT88-203ENST00000389373 KINO60870 393 aaKnown RBP10.95□□□□□ -0.66
IFT88-203ENST00000389373 CSDE1O75534 798 aaKnown RBP10.95□□□□□ -0.66
IFT88-203ENST00000389373 EIF4BP23588 611 aaKnown RBP10.95□□□□□ -0.66
IFT88-203ENST00000389373 TMOD1P28289 359 aa10.95□□□□□ -0.66
IFT88-203ENST00000389373 SMARCA1P28370 1054 aa10.95□□□□□ -0.66
IFT88-203ENST00000389373 POLGP54098 1239 aaPredicted RBP10.95□□□□□ -0.66
IFT88-203ENST00000389373 ATXN1P54253 815 aaKnown RBP10.95□□□□□ -0.66
IFT88-203ENST00000389373 ANTXR2P58335 489 aa10.95□□□□□ -0.66
IFT88-203ENST00000389373 ST3GAL2Q16842 350 aa10.95□□□□□ -0.66
IFT88-203ENST00000389373 CEP55Q53EZ4 464 aa10.95□□□□□ -0.66
IFT88-203ENST00000389373 GPR152Q8TDT2 470 aa10.95□□□□□ -0.66
IFT88-203ENST00000389373 BCL7CQ8WUZ0 217 aaPredicted RBP10.95□□□□□ -0.66
IFT88-203ENST00000389373 LPPQ93052 612 aa10.95□□□□□ -0.66
IFT88-203ENST00000389373 IGSF21Q96ID5 467 aa10.95□□□□□ -0.66
IFT88-203ENST00000389373 CHAMP1Q96JM3 812 aa10.95□□□□□ -0.66
IFT88-203ENST00000389373 ADAMTS10Q9H324 1103 aa10.95□□□□□ -0.66
IFT88-203ENST00000389373 NRDE2Q9H7Z3 1164 aa10.95□□□□□ -0.66
IFT88-203ENST00000389373 TCEAL9Q9UHQ7 104 aa10.95□□□□□ -0.66
IFT88-203ENST00000389373 IRAK3Q9Y616 596 aa10.95□□□□□ -0.66
IFT88-203ENST00000389373 A0A0U1RQF3 1178 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 CCDC195A0A1B0GUA6 201 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 POTEMA6NI47 508 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 CCDC69A6NI79 296 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 C2CD2LO14523 706 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 N4BP1O75113 896 aaKnown RBP10.94□□□□□ -0.66
IFT88-203ENST00000389373 LRRN2O75325 713 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 DDAH1O94760 285 aa10.94□□□□□ -0.66
IFT88-203ENST00000389373 GALTP07902 379 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms