RNA–Protein interactions for RNA: ENST00000389134.9

CNEP1R1-201, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 3

Gene CNEP1R1, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-201ENST00000389134 ZNF76P36508 570 aa24.27■■□□□ 1.48
CNEP1R1-201ENST00000389134 SWSAP1Q6NVH7 229 aa24.27■■□□□ 1.48
CNEP1R1-201ENST00000389134 CKAP2LQ8IYA6 745 aa24.27■■□□□ 1.48
CNEP1R1-201ENST00000389134 ADSSL1Q8N142 457 aa24.27■■□□□ 1.48
CNEP1R1-201ENST00000389134 DBR1Q9UK59 544 aaKnown RBP24.27■■□□□ 1.48
CNEP1R1-201ENST00000389134 SLC12A7Q9Y666 1083 aa24.27■■□□□ 1.48
CNEP1R1-201ENST00000389134 DMXL1Q9Y485 3027 aa24.27■■□□□ 1.48
CNEP1R1-201ENST00000389134 CXCL14O95715 111 aa24.26■■□□□ 1.47
CNEP1R1-201ENST00000389134 SREBF1P36956 1147 aa24.26■■□□□ 1.47
CNEP1R1-201ENST00000389134 NAPAP54920 295 aa24.26■■□□□ 1.47
CNEP1R1-201ENST00000389134 RARS2Q5T160 578 aaKnown RBP24.26■■□□□ 1.47
CNEP1R1-201ENST00000389134 PGBD1Q96JS3 809 aa24.26■■□□□ 1.47
CNEP1R1-201ENST00000389134 CEP131Q9UPN4 1083 aa24.26■■□□□ 1.47
CNEP1R1-201ENST00000389134 RBM8AQ9Y5S9 174 aaKnown RBP24.26■■□□□ 1.47
CNEP1R1-201ENST00000389134 MAGEB2O15479 319 aa24.25■■□□□ 1.47
CNEP1R1-201ENST00000389134 EOMESO95936 686 aa24.25■■□□□ 1.47
CNEP1R1-201ENST00000389134 CA8P35219 290 aa24.25■■□□□ 1.47
CNEP1R1-201ENST00000389134 ALDH7A1P49419 539 aaKnown RBP24.25■■□□□ 1.47
CNEP1R1-201ENST00000389134 ADCY7P51828 1080 aa24.25■■□□□ 1.47
CNEP1R1-201ENST00000389134 WWC2Q6AWC2 1192 aa24.25■■□□□ 1.47
CNEP1R1-201ENST00000389134 PPP1R18Q6NYC8 613 aa24.25■■□□□ 1.47
CNEP1R1-201ENST00000389134 TMEM87AQ8NBN3 555 aa24.25■■□□□ 1.47
CNEP1R1-201ENST00000389134 MAFBQ9Y5Q3 323 aaPredicted RBP24.25■■□□□ 1.47
CNEP1R1-201ENST00000389134 C2orf16Q68DN1 1984 aa24.24■■□□□ 1.47
CNEP1R1-201ENST00000389134 DHX15O43143 795 aaKnown RBP24.24■■□□□ 1.47
CNEP1R1-201ENST00000389134 WEE2P0C1S8 567 aa24.24■■□□□ 1.47
CNEP1R1-201ENST00000389134 EIF4BP23588 611 aaKnown RBP24.24■■□□□ 1.47
CNEP1R1-201ENST00000389134 NLRP11P59045 1033 aaKnown RBP24.24■■□□□ 1.47
CNEP1R1-201ENST00000389134 AP3B2Q13367 1082 aa24.24■■□□□ 1.47
CNEP1R1-201ENST00000389134 CLLU1OSQ5K130 101 aa24.24■■□□□ 1.47
CNEP1R1-201ENST00000389134 RAB11FIP4Q86YS3 637 aa24.24■■□□□ 1.47
CNEP1R1-201ENST00000389134 FLCNQ8NFG4 579 aa24.24■■□□□ 1.47
CNEP1R1-201ENST00000389134 TMEM169Q96HH4 297 aa24.24■■□□□ 1.47
CNEP1R1-201ENST00000389134 MAP7D2Q96T17 732 aa24.24■■□□□ 1.47
CNEP1R1-201ENST00000389134 MRPL9Q9BYD2 267 aaKnown RBP24.24■■□□□ 1.47
CNEP1R1-201ENST00000389134 GLT8D2Q9H1C3 349 aa24.24■■□□□ 1.47
CNEP1R1-201ENST00000389134 CYP26B1Q9NR63 512 aa24.24■■□□□ 1.47
CNEP1R1-201ENST00000389134 AKT3Q9Y243 479 aa24.24■■□□□ 1.47
CNEP1R1-201ENST00000389134 A0A0U1RQF3 1178 aa24.23■■□□□ 1.47
CNEP1R1-201ENST00000389134 CARNS1A5YM72 827 aa24.23■■□□□ 1.47
CNEP1R1-201ENST00000389134 TMOD1P28289 359 aa24.23■■□□□ 1.47
CNEP1R1-201ENST00000389134 GIT2Q14161 759 aa24.23■■□□□ 1.47
CNEP1R1-201ENST00000389134 PLA2G4DQ86XP0 818 aa24.23■■□□□ 1.47
CNEP1R1-201ENST00000389134 C12orf76Q8N812 135 aaPredicted RBP24.23■■□□□ 1.47
CNEP1R1-201ENST00000389134 RNF169Q8NCN4 708 aa24.23■■□□□ 1.47
CNEP1R1-201ENST00000389134 ADAMTS10Q9H324 1103 aa24.23■■□□□ 1.47
CNEP1R1-201ENST00000389134 IRAK3Q9Y616 596 aa24.23■■□□□ 1.47
CNEP1R1-201ENST00000389134 IPO5O00410 1097 aaKnown RBP24.22■■□□□ 1.47
CNEP1R1-201ENST00000389134 AOC1P19801 751 aa24.22■■□□□ 1.47
CNEP1R1-201ENST00000389134 METAP2P50579 478 aaKnown RBP eCLIP24.22■■□□□ 1.47
CNEP1R1-201ENST00000389134 CLCN3P51790 818 aa24.22■■□□□ 1.47
CNEP1R1-201ENST00000389134 BCAR1P56945 870 aa24.22■■□□□ 1.47
CNEP1R1-201ENST00000389134 TYW1BQ6NUM6 668 aa24.22■■□□□ 1.47
CNEP1R1-201ENST00000389134 EFCAB12Q6NXP0 572 aa24.22■■□□□ 1.47
CNEP1R1-201ENST00000389134 VPS52Q8N1B4 723 aa24.22■■□□□ 1.47
CNEP1R1-201ENST00000389134 HELQQ8TDG4 1101 aa24.22■■□□□ 1.47
CNEP1R1-201ENST00000389134 ACSF2Q96CM8 615 aaPredicted RBP24.22■■□□□ 1.47
CNEP1R1-201ENST00000389134 TBC1D22BQ9NU19 505 aa24.22■■□□□ 1.47
CNEP1R1-201ENST00000389134 FRYLO94915 3013 aa24.21■■□□□ 1.47
CNEP1R1-201ENST00000389134 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.21■■□□□ 1.47
CNEP1R1-201ENST00000389134 FAM86B1E9PN63 330 aa24.21■■□□□ 1.47
CNEP1R1-201ENST00000389134 hCG_1984214I3L0E3 225 aa24.21■■□□□ 1.47
CNEP1R1-201ENST00000389134 FAM86B2P0C5J1 330 aa24.21■■□□□ 1.47
CNEP1R1-201ENST00000389134 CWF19L1Q69YN2 538 aaKnown RBP24.21■■□□□ 1.47
CNEP1R1-201ENST00000389134 ZNF746Q6NUN9 644 aaPredicted RBP24.21■■□□□ 1.47
CNEP1R1-201ENST00000389134 SYNE3Q6ZMZ3 975 aa24.21■■□□□ 1.47
CNEP1R1-201ENST00000389134 ZNF598Q86UK7 904 aaKnown RBP24.21■■□□□ 1.47
CNEP1R1-201ENST00000389134 MICU3Q86XE3 530 aa24.21■■□□□ 1.47
CNEP1R1-201ENST00000389134 ZNF713Q8N859 430 aaPredicted RBP24.21■■□□□ 1.47
CNEP1R1-201ENST00000389134 RSPH1Q8WYR4 309 aa24.21■■□□□ 1.47
CNEP1R1-201ENST00000389134 RTP3Q9BQQ7 232 aa24.21■■□□□ 1.47
CNEP1R1-201ENST00000389134 ZBP1Q9H171 429 aa24.21■■□□□ 1.47
CNEP1R1-201ENST00000389134 DACT1Q9NYF0 836 aa24.21■■□□□ 1.47
CNEP1R1-201ENST00000389134 CNTNAP5Q8WYK1 1306 aa24.2■■□□□ 1.46
CNEP1R1-201ENST00000389134 SMCO2A6NFE2 343 aa24.2■■□□□ 1.46
CNEP1R1-201ENST00000389134 NT5C1B-RDH14C9J2C7 533 aa24.2■■□□□ 1.46
CNEP1R1-201ENST00000389134 PSAPP07602 524 aa24.2■■□□□ 1.46
CNEP1R1-201ENST00000389134 CLK2P49760 499 aaKnown RBP24.2■■□□□ 1.46
CNEP1R1-201ENST00000389134 POLGP54098 1239 aaPredicted RBP24.2■■□□□ 1.46
CNEP1R1-201ENST00000389134 TRMT1LQ7Z2T5 733 aaKnown RBP24.2■■□□□ 1.46
CNEP1R1-201ENST00000389134 SGMS1Q86VZ5 419 aa24.2■■□□□ 1.46
CNEP1R1-201ENST00000389134 SMAP1Q8IYB5 467 aaPredicted RBP24.2■■□□□ 1.46
CNEP1R1-201ENST00000389134 CCDC105Q8IYK2 499 aa24.2■■□□□ 1.46
CNEP1R1-201ENST00000389134 LINC01465Q8N7H1 131 aa24.2■■□□□ 1.46
CNEP1R1-201ENST00000389134 SLC22A17Q8WUG5 538 aa24.2■■□□□ 1.46
CNEP1R1-201ENST00000389134 FAM167AQ96KS9 214 aa24.2■■□□□ 1.46
CNEP1R1-201ENST00000389134 RBM28Q9NW13 759 aaKnown RBP24.2■■□□□ 1.46
CNEP1R1-201ENST00000389134 PCDHA10Q9Y5I2 948 aa24.2■■□□□ 1.46
CNEP1R1-201ENST00000389134 CEP250Q9BV73 2442 aa24.19■■□□□ 1.46
CNEP1R1-201ENST00000389134 CTSAP10619 480 aa24.19■■□□□ 1.46
CNEP1R1-201ENST00000389134 EPCAMP16422 314 aa24.19■■□□□ 1.46
CNEP1R1-201ENST00000389134 TDGQ13569 410 aa24.19■■□□□ 1.46
CNEP1R1-201ENST00000389134 KANK3Q6NY19 840 aa24.19■■□□□ 1.46
CNEP1R1-201ENST00000389134 OTOP3Q7RTS5 596 aa24.19■■□□□ 1.46
CNEP1R1-201ENST00000389134 CABP7Q86V35 215 aa24.19■■□□□ 1.46
CNEP1R1-201ENST00000389134 PPFIBP1Q86W92 1011 aa24.19■■□□□ 1.46
CNEP1R1-201ENST00000389134 ZNF577Q9BSK1 485 aa24.19■■□□□ 1.46
CNEP1R1-201ENST00000389134 TCEAL9Q9UHQ7 104 aa24.19■■□□□ 1.46
CNEP1R1-201ENST00000389134 CACNA1BQ00975 2339 aa24.19■■□□□ 1.46
CNEP1R1-201ENST00000389134 IGLV3-22A0A075B6J6 115 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms