RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 F8VZ95 297 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 HIP1RO75146 1068 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 GLI1P08151 1106 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 CHRM1P11229 460 aaPredicted RBP16.29■□□□□ 0.2
SCFD2-201ENST00000388940 TNNC1P63316 161 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 IRX5P78411 483 aaPredicted RBP16.29■□□□□ 0.2
SCFD2-201ENST00000388940 ALCAMQ13740 583 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 ZYXQ15942 572 aaKnown RBP16.29■□□□□ 0.2
SCFD2-201ENST00000388940 EIF1ADQ8N9N8 165 aaKnown RBP16.29■□□□□ 0.2
SCFD2-201ENST00000388940 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.29■□□□□ 0.21e-6■■■■■ 69
SCFD2-201ENST00000388940 MAP3K20Q9NYL2 800 aaKnown RBP16.29■□□□□ 0.2
SCFD2-201ENST00000388940 CWC15Q9P013 229 aaKnown RBP16.29■□□□□ 0.2
SCFD2-201ENST00000388940 DBR1Q9UK59 544 aaKnown RBP16.29■□□□□ 0.2
SCFD2-201ENST00000388940 STXBP5LQ9Y2K9 1186 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 OPA1O60313 960 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 EVI5O60447 810 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 HEXIM1O94992 359 aaKnown RBP16.29■□□□□ 0.2
SCFD2-201ENST00000388940 P4HBP07237 508 aaKnown RBP16.29■□□□□ 0.2
SCFD2-201ENST00000388940 CCDC172P0C7W6 258 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 LMNB1P20700 586 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 RFX1P22670 979 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 NOP2P46087 812 aaKnown RBP16.29■□□□□ 0.2
SCFD2-201ENST00000388940 PAK2Q13177 524 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 TNIP1Q15025 636 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 MIGA2Q7L4E1 593 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 MCF2L2Q86YR7 1114 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 SYCE1Q8N0S2 351 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 DAW1Q8N136 415 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 SAMD3Q8N6K7 520 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 SCFD2Q8WU76 684 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 RIN2Q8WYP3 895 aaPredicted RBP16.29■□□□□ 0.2
SCFD2-201ENST00000388940 CALR3Q96L12 384 aaKnown RBP16.29■□□□□ 0.2
SCFD2-201ENST00000388940 HINFPQ9BQA5 517 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 SYT11Q9BT88 431 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 GLIS2Q9BZE0 524 aaPredicted RBP16.29■□□□□ 0.2
SCFD2-201ENST00000388940 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.29■□□□□ 0.2
SCFD2-201ENST00000388940 SUCLA2Q9P2R7 463 aaPredicted RBP16.29■□□□□ 0.2
SCFD2-201ENST00000388940 DNAJC12Q9UKB3 198 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 CCPG1Q9ULG6 757 aa16.29■□□□□ 0.2
SCFD2-201ENST00000388940 ZBTB12Q9Y330 459 aaPredicted RBP16.29■□□□□ 0.2
SCFD2-201ENST00000388940 GOLGA8KD6RF30 607 aa16.28■□□□□ 0.2
SCFD2-201ENST00000388940 LYPLA2O95372 231 aa16.28■□□□□ 0.2
SCFD2-201ENST00000388940 IVLP07476 585 aa16.28■□□□□ 0.2
SCFD2-201ENST00000388940 MRPS25P82663 173 aaKnown RBP16.28■□□□□ 0.2
SCFD2-201ENST00000388940 MIER3Q7Z3K6 550 aa16.28■□□□□ 0.2
SCFD2-201ENST00000388940 KSR1Q8IVT5 923 aa16.28■□□□□ 0.2
SCFD2-201ENST00000388940 CDAN1Q8IWY9 1227 aa16.28■□□□□ 0.2
SCFD2-201ENST00000388940 MREGQ8N565 214 aa16.28■□□□□ 0.2
SCFD2-201ENST00000388940 PRPF38AQ8NAV1 312 aaKnown RBP16.28■□□□□ 0.2
SCFD2-201ENST00000388940 BANK1Q8NDB2 785 aa16.28■□□□□ 0.2
SCFD2-201ENST00000388940 CLEC4DQ8WXI8 215 aa16.28■□□□□ 0.2
SCFD2-201ENST00000388940 ZBTB9Q96C00 473 aa16.28■□□□□ 0.2
SCFD2-201ENST00000388940 AGBL1Q96MI9 1066 aa16.28■□□□□ 0.2
SCFD2-201ENST00000388940 KCNH7Q9NS40 1196 aa16.28■□□□□ 0.2
SCFD2-201ENST00000388940 ZNRF3Q9ULT6 936 aa16.28■□□□□ 0.2
SCFD2-201ENST00000388940 UBIAD1Q9Y5Z9 338 aa16.28■□□□□ 0.2
SCFD2-201ENST00000388940 KCNK3O14649 394 aa16.27■□□□□ 0.2
SCFD2-201ENST00000388940 DHX15O43143 795 aaKnown RBP16.27■□□□□ 0.2
SCFD2-201ENST00000388940 INPP5BP32019 993 aa16.27■□□□□ 0.2
SCFD2-201ENST00000388940 BFSP1Q12934 665 aa16.27■□□□□ 0.2
SCFD2-201ENST00000388940 DRAP1Q14919 205 aaPredicted RBP16.27■□□□□ 0.2
SCFD2-201ENST00000388940 CBWD6Q4V339 395 aa16.27■□□□□ 0.2
SCFD2-201ENST00000388940 CBWD3Q5JTY5 395 aa16.27■□□□□ 0.2
SCFD2-201ENST00000388940 CBWD5Q5RIA9 395 aa16.27■□□□□ 0.2
SCFD2-201ENST00000388940 PADI6Q6TGC4 694 aa16.27■□□□□ 0.2
SCFD2-201ENST00000388940 C12orf56Q8IXR9 622 aa16.27■□□□□ 0.2
SCFD2-201ENST00000388940 LNX1Q8TBB1 728 aaPredicted RBP16.27■□□□□ 0.2
SCFD2-201ENST00000388940 VTI1AQ96AJ9 217 aa16.27■□□□□ 0.2
SCFD2-201ENST00000388940 ZFP91Q96JP5 570 aaPredicted RBP16.27■□□□□ 0.2
SCFD2-201ENST00000388940 KRT12Q99456 494 aa16.27■□□□□ 0.2
SCFD2-201ENST00000388940 GPR88Q9GZN0 384 aa16.27■□□□□ 0.2
SCFD2-201ENST00000388940 INTS2Q9H0H0 1204 aaKnown RBP16.27■□□□□ 0.2
SCFD2-201ENST00000388940 TMEM206Q9H813 350 aa16.27■□□□□ 0.2
SCFD2-201ENST00000388940 EPB41L5Q9HCM4 733 aa16.27■□□□□ 0.2
SCFD2-201ENST00000388940 ZNF277Q9NRM2 450 aaPredicted RBP16.27■□□□□ 0.2
SCFD2-201ENST00000388940 WDR46O15213 610 aaKnown RBP16.27■□□□□ 0.19
SCFD2-201ENST00000388940 CYP2J2P51589 502 aa16.27■□□□□ 0.19
SCFD2-201ENST00000388940 PPFIA1Q13136 1202 aa16.27■□□□□ 0.19
SCFD2-201ENST00000388940 SF3B2Q13435 895 aaKnown RBP16.27■□□□□ 0.19
SCFD2-201ENST00000388940 PCNX4Q63HM2 1172 aa16.27■□□□□ 0.19
SCFD2-201ENST00000388940 TSEN2Q8NCE0 465 aaKnown RBP16.27■□□□□ 0.19
SCFD2-201ENST00000388940 U2AF1L4Q8WU68 220 aaKnown RBP16.27■□□□□ 0.19
SCFD2-201ENST00000388940 COL20A1Q9P218 1284 aa16.27■□□□□ 0.19
SCFD2-201ENST00000388940 LARSQ9P2J5 1176 aaKnown RBP16.27■□□□□ 0.19
SCFD2-201ENST00000388940 APEX2Q9UBZ4 518 aa16.27■□□□□ 0.19
SCFD2-201ENST00000388940 NCANO14594 1321 aa16.27■□□□□ 0.19
SCFD2-201ENST00000388940 HSF2BPO75031 334 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 TMEM253P0C7T8 217 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 CARSP49589 748 aaKnown RBP16.26■□□□□ 0.19
SCFD2-201ENST00000388940 GALCP54803 685 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 GUCY2DQ02846 1103 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 SYCP3Q8IZU3 236 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 RASGEF1CQ8N431 466 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 FAM76AQ8TAV0 307 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 WHAMMQ8TF30 809 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 LPAR1Q92633 364 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 CAMKK2Q96RR4 588 aa16.26■□□□□ 0.19
SCFD2-201ENST00000388940 AGO4Q9HCK5 861 aaKnown RBP16.26■□□□□ 0.19
SCFD2-201ENST00000388940 BHMG1C9JSJ3 638 aaPredicted RBP16.26■□□□□ 0.19
SCFD2-201ENST00000388940 P4HA2O15460 535 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms