RNA–Protein interactions for RNA: ENST00000383738.6

CSPG5-202, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSPG5, Length 4,161 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-202ENST00000383738 DCUN1D2Q6PH85 259 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 CCDC197Q8NCU1 140 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 KLHL29Q96CT2 875 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 TRIM9Q9C026 710 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 ACAD9Q9H845 621 aa20.38■□□□□ 0.85
CSPG5-202ENST00000383738 AKAP12Q02952 1782 aa20.37■□□□□ 0.85
CSPG5-202ENST00000383738 PHF20L1A8MW92 1017 aa20.37■□□□□ 0.85
CSPG5-202ENST00000383738 TULP2O00295 520 aa20.37■□□□□ 0.85
CSPG5-202ENST00000383738 TRIM49P0CI25 452 aa20.37■□□□□ 0.85
CSPG5-202ENST00000383738 TRIM49CP0CI26 452 aa20.37■□□□□ 0.85
CSPG5-202ENST00000383738 HDLBPQ00341 1268 aaKnown RBP20.37■□□□□ 0.85
CSPG5-202ENST00000383738 SPC25Q9HBM1 224 aa20.37■□□□□ 0.85
CSPG5-202ENST00000383738 PALMO75781 387 aa20.37■□□□□ 0.85
CSPG5-202ENST00000383738 TMEM191BP0C7N4 346 aa20.37■□□□□ 0.85
CSPG5-202ENST00000383738 MIS18BP1Q6P0N0 1132 aa20.37■□□□□ 0.85
CSPG5-202ENST00000383738 TMED8Q6PL24 325 aaPredicted RBP20.37■□□□□ 0.85
CSPG5-202ENST00000383738 TBK1Q9UHD2 729 aa20.37■□□□□ 0.85
CSPG5-202ENST00000383738 GCLMP48507 274 aa20.37■□□□□ 0.85
CSPG5-202ENST00000383738 PTPAQ15257 358 aa20.37■□□□□ 0.85
CSPG5-202ENST00000383738 UAP1Q16222 522 aaPredicted RBP20.37■□□□□ 0.85
CSPG5-202ENST00000383738 TEX13BQ9BXU2 312 aa20.37■□□□□ 0.85
CSPG5-202ENST00000383738 NKIRAS1Q9NYS0 192 aa20.37■□□□□ 0.85
CSPG5-202ENST00000383738 STK24Q9Y6E0 443 aa20.37■□□□□ 0.85
CSPG5-202ENST00000383738 MYMKA6NI61 221 aa20.36■□□□□ 0.85
CSPG5-202ENST00000383738 NR3C2P08235 984 aa20.36■□□□□ 0.85
CSPG5-202ENST00000383738 SLC8A1P32418 973 aa20.36■□□□□ 0.85
CSPG5-202ENST00000383738 SCARA5Q6ZMJ2 495 aa20.36■□□□□ 0.85
CSPG5-202ENST00000383738 UNC13DQ70J99 1090 aa20.36■□□□□ 0.85
CSPG5-202ENST00000383738 IL17RAQ96F46 866 aa20.36■□□□□ 0.85
CSPG5-202ENST00000383738 ZIM3Q96PE6 472 aa20.36■□□□□ 0.85
CSPG5-202ENST00000383738 AGXT2Q9BYV1 514 aa20.36■□□□□ 0.85
CSPG5-202ENST00000383738 KNDC1Q76NI1 1749 aa20.36■□□□□ 0.85
CSPG5-202ENST00000383738 ZSCAN5CA6NGD5 496 aaPredicted RBP20.36■□□□□ 0.85
CSPG5-202ENST00000383738 INTS13Q9NVM9 706 aa20.36■□□□□ 0.85
CSPG5-202ENST00000383738 GCNT4Q9P109 453 aa20.36■□□□□ 0.85
CSPG5-202ENST00000383738 EMBQ6PCB8 327 aa20.36■□□□□ 0.85
CSPG5-202ENST00000383738 NLRP7Q8WX94 980 aa20.36■□□□□ 0.85
CSPG5-202ENST00000383738 RNPC3Q96LT9 517 aaKnown RBP20.36■□□□□ 0.85
CSPG5-202ENST00000383738 SLC5A4Q9NY91 659 aa20.36■□□□□ 0.85
CSPG5-202ENST00000383738 PGK2P07205 417 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 PSAPP07602 524 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 MAN2A1Q16706 1144 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 CRY2Q49AN0 593 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 FAM160B1Q5W0V3 765 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 ANKRD40Q6AI12 368 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 NLGN2Q8NFZ4 835 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 GDAP1Q8TB36 358 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 PPP1R37O75864 691 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 LSP1P33241 339 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 YARSP54577 528 aaKnown RBP20.35■□□□□ 0.85
CSPG5-202ENST00000383738 HOOK3Q86VS8 718 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 CDR2LQ86X02 465 aaPredicted RBP20.35■□□□□ 0.85
CSPG5-202ENST00000383738 FAM20AQ96MK3 541 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 BCL9LQ86UU0 1499 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 ADAMTSL3P82987 1691 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 WDR64B1ANS9 1081 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 FOXP2O15409 715 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 PSMC2P35998 433 aaKnown RBP20.35■□□□□ 0.85
CSPG5-202ENST00000383738 QARSP47897 775 aaKnown RBP20.35■□□□□ 0.85
CSPG5-202ENST00000383738 HUNKP57058 714 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 TGFB2P61812 414 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 LRRC14Q15048 493 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 ZC2HC1CQ53FD0 456 aaPredicted RBP20.35■□□□□ 0.85
CSPG5-202ENST00000383738 KIFAP3Q92845 792 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 RBM12Q9NTZ6 932 aaKnown RBP20.35■□□□□ 0.85
CSPG5-202ENST00000383738 LRRC53A6NM62 1247 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 HIP1RO75146 1068 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 EEF1GP26641 437 aaKnown RBP20.35■□□□□ 0.85
CSPG5-202ENST00000383738 ELF1P32519 619 aa20.35■□□□□ 0.85
CSPG5-202ENST00000383738 ACTN4O43707 911 aaKnown RBP20.34■□□□□ 0.85
CSPG5-202ENST00000383738 SMIM24O75264 130 aa20.34■□□□□ 0.85
CSPG5-202ENST00000383738 VWA3BQ502W6 1294 aa20.34■□□□□ 0.85
CSPG5-202ENST00000383738 CCDC38Q502W7 563 aa20.34■□□□□ 0.85
CSPG5-202ENST00000383738 ALS2CLQ60I27 953 aa20.34■□□□□ 0.85
CSPG5-202ENST00000383738 HNRNPLLQ8WVV9 542 aaKnown RBP20.34■□□□□ 0.85
CSPG5-202ENST00000383738 IWS1Q96ST2 819 aa20.34■□□□□ 0.85
CSPG5-202ENST00000383738 SPATS2LQ9NUQ6 558 aaKnown RBP20.34■□□□□ 0.85
CSPG5-202ENST00000383738 LGALS16A8MUM7 142 aa20.34■□□□□ 0.85
CSPG5-202ENST00000383738 ZNF384Q8TF68 577 aa20.34■□□□□ 0.85
CSPG5-202ENST00000383738 ZNF473Q8WTR7 871 aaKnown RBP20.34■□□□□ 0.85
CSPG5-202ENST00000383738 CDHR1Q96JP9 859 aa20.34■□□□□ 0.85
CSPG5-202ENST00000383738 UBE2TQ9NPD8 197 aaPredicted RBP20.34■□□□□ 0.85
CSPG5-202ENST00000383738 BMP6P22004 513 aa20.34■□□□□ 0.85
CSPG5-202ENST00000383738 CDC25CP30307 473 aa20.34■□□□□ 0.85
CSPG5-202ENST00000383738 SSTR3P32745 418 aaPredicted RBP20.34■□□□□ 0.85
CSPG5-202ENST00000383738 STX2P32856 288 aa20.34■□□□□ 0.85
CSPG5-202ENST00000383738 MYL7Q01449 175 aa20.34■□□□□ 0.85
CSPG5-202ENST00000383738 C1orf112Q9NSG2 853 aa20.34■□□□□ 0.85
CSPG5-202ENST00000383738 WDR46O15213 610 aaKnown RBP20.33■□□□□ 0.85
CSPG5-202ENST00000383738 GNA14O95837 355 aa20.33■□□□□ 0.85
CSPG5-202ENST00000383738 PDHA1P08559 390 aa20.33■□□□□ 0.85
CSPG5-202ENST00000383738 TMEM143Q96AN5 459 aa20.33■□□□□ 0.85
CSPG5-202ENST00000383738 PSMD1Q99460 953 aa20.33■□□□□ 0.85
CSPG5-202ENST00000383738 SYNJ2BP-COX16A0A087WUM0 186 aa20.33■□□□□ 0.85
CSPG5-202ENST00000383738 M0QZ92 97 aa20.33■□□□□ 0.85
CSPG5-202ENST00000383738 CELF2O95319 508 aaKnown RBP20.33■□□□□ 0.85
CSPG5-202ENST00000383738 FBXO41Q8TF61 875 aa20.33■□□□□ 0.85
CSPG5-202ENST00000383738 PURBQ96QR8 312 aaKnown RBP20.33■□□□□ 0.85
CSPG5-202ENST00000383738 COX16Q9P0S2 106 aa20.33■□□□□ 0.85
CSPG5-202ENST00000383738 DENND3A2RUS2 1198 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms