RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 PTPRN2Q92932 1015 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 PDP2Q9P2J9 529 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 ARPP21Q9UBL0 812 aaPredicted RBP20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 ARMCX3Q9UH62 379 aaPredicted RBP20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 MYH2Q9UKX2 1941 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 FAM205AQ6ZU69 1335 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 CAPN9O14815 690 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 PLCG2P16885 1265 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 RCAN1P53805 252 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 RNF43Q68DV7 783 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 TMTC3Q6ZXV5 915 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 NT5C3AQ9H0P0 336 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 RMI1Q9H9A7 625 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 CTNNAL1Q9UBT7 734 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 CHMP2BQ9UQN3 213 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 ARHGAP23Q9P227 1491 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 TCRBV5S4A2TA0A5A2 114 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 SEC23AQ15436 765 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 CMPK2Q5EBM0 449 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 WASHC2DQ5SRD0 308 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 HS2ST1Q7LGA3 356 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 ENDOVQ8N8Q3 282 aaKnown RBP20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 RAPGEF4Q8WZA2 1011 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 FAM192AQ9GZU8 254 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 PRKAG3Q9UGI9 489 aa20.46■□□□□ 0.87
SMARCD1-201ENST00000381513 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.45■□□□□ 0.86
SMARCD1-201ENST00000381513 BHMG1C9JSJ3 638 aaPredicted RBP20.45■□□□□ 0.86
SMARCD1-201ENST00000381513 RIPK2O43353 540 aa20.45■□□□□ 0.86
SMARCD1-201ENST00000381513 ERVK-5Q9HDB9 667 aa20.45■□□□□ 0.86
SMARCD1-201ENST00000381513 H2AFZP0C0S5 128 aa20.45■□□□□ 0.86
SMARCD1-201ENST00000381513 ERFP50548 548 aa20.45■□□□□ 0.86
SMARCD1-201ENST00000381513 GALNT17Q6IS24 598 aa20.45■□□□□ 0.86
SMARCD1-201ENST00000381513 H2AFVQ71UI9 128 aa20.45■□□□□ 0.86
SMARCD1-201ENST00000381513 ZNF571Q7Z3V5 609 aaPredicted RBP20.45■□□□□ 0.86
SMARCD1-201ENST00000381513 ANKRD23Q86SG2 305 aa20.45■□□□□ 0.86
SMARCD1-201ENST00000381513 SYN2Q92777 582 aaPredicted RBP20.45■□□□□ 0.86
SMARCD1-201ENST00000381513 DNAJC17Q9NVM6 304 aaKnown RBP20.45■□□□□ 0.86
SMARCD1-201ENST00000381513 PTPN22Q9Y2R2 807 aa20.45■□□□□ 0.86
SMARCD1-201ENST00000381513 LMNAP02545 664 aaKnown RBP20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 TECP42680 631 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 PABPC1LQ4VXU2 614 aaKnown RBP20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 SV2BQ7L1I2 683 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 SYCE1Q8N0S2 351 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 STMN2Q93045 179 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 TIPINQ9BVW5 301 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 NPHP3-ACAD11A0A0J9YXS1 232 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 MAPK13O15264 365 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 KRT36O76013 467 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 PTENP60484 403 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 ZDHHC24Q6UX98 284 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 ARHGAP18Q8N392 663 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 GLIS3Q8NEA6 775 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 C7orf25Q9BPX7 421 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 CNOT7Q9UIV1 285 aaKnown RBP20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 NAGPAQ9UK23 515 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 TMCO1Q9UM00 188 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 COL4A3BPQ9Y5P4 624 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 ACTN1P12814 892 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 MARK3P27448 753 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 CALML3P27482 149 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 UBE4AQ14139 1066 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 Q4G0T1 1027 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 OLFML2BQ68BL8 750 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 RFWD3Q6PCD5 774 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 BTNL9Q6UXG8 535 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 U2AF1L4Q8WU68 220 aaKnown RBP20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 C18orf8Q96DM3 657 aa20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 MMTAG2Q9BU76 263 aaKnown RBP20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 SUCLA2Q9P2R7 463 aaPredicted RBP20.44■□□□□ 0.86
SMARCD1-201ENST00000381513 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 KIAA0391O15091 583 aaKnown RBP20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 MAP3K7O43318 606 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 ABCB4P21439 1286 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 POLGP54098 1239 aaPredicted RBP20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 BPIFB4P59827 614 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 TCERG1LQ5VWI1 586 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 CGB2Q6NT52 195 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 VSTM1Q6UX27 236 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 SESTD1Q86VW0 696 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 SRRM1Q8IYB3 904 aaKnown RBP20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 RASGEF1CQ8N431 466 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 CALML4Q96GE6 196 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 TBC1D7Q9P0N9 293 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 CYP2D7A0A087X1C5 515 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 GNA14O95837 355 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 OATP04181 439 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 POU5F1Q01860 360 aaKnown RBP20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 DNAJC3Q13217 504 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 MTFR1Q15390 333 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 PLPPR3Q6T4P5 718 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 NELFCDQ8IXH7 590 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 ETNK2Q9NVF9 386 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 SEC63Q9UGP8 760 aaKnown RBP20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 CHKBQ9Y259 395 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 CNTNAP5Q8WYK1 1306 aa20.43■□□□□ 0.86
SMARCD1-201ENST00000381513 FAM196BA6NMK8 535 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 RPL21P46778 160 aaKnown RBP20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 TROAPQ12815 778 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 LETM2Q2VYF4 491 aa20.42■□□□□ 0.86
SMARCD1-201ENST00000381513 LRRC74BQ6ZQY2 392 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms