RNA–Protein interactions for RNA: ENST00000381323.7

FAM49A-201, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49A, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-201ENST00000381323 RAB27AP51159 221 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 SUGP1Q8IWZ8 645 aaKnown RBP8.73□□□□□ -1.01
FAM49A-201ENST00000381323 LXNQ9BS40 222 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 MFSD1Q9H3U5 465 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 MYH6P13533 1939 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 A0A087WZ62 844 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 PFKFB2O60825 505 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 SP100P23497 879 aaPredicted RBP8.73□□□□□ -1.01
FAM49A-201ENST00000381323 CCT6AP40227 531 aaKnown RBP8.73□□□□□ -1.01
FAM49A-201ENST00000381323 KRT79Q5XKE5 535 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 KLHL23Q8NBE8 558 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 FDXACB1Q9BRP7 624 aaPredicted RBP8.73□□□□□ -1.01
FAM49A-201ENST00000381323 TMEM161AQ9NX61 479 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 COL4A3BPQ9Y5P4 624 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 IGSF9BQ9UPX0 1349 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 CCDC169A6NNP5 214 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 H3BNC9 293 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 ASAP2O43150 1006 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 FGFR4P22455 802 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 RFC5P40937 340 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 SCRN1Q12765 414 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 EPHA7Q15375 998 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 RPAINQ86UA6 219 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 KIAA0319LQ8IZA0 1049 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 NECAB3Q96P71 396 aaPredicted RBP8.73□□□□□ -1.01
FAM49A-201ENST00000381323 AGO3Q9H9G7 860 aaKnown RBP8.73□□□□□ -1.01
FAM49A-201ENST00000381323 CD207Q9UJ71 328 aa8.73□□□□□ -1.01
FAM49A-201ENST00000381323 CSDE1O75534 798 aaKnown RBP8.72□□□□□ -1.01
FAM49A-201ENST00000381323 ITGA4P13612 1032 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 PLA2G4FQ68DD2 849 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 FAM43BQ6ZT52 329 aaPredicted RBP8.72□□□□□ -1.01
FAM49A-201ENST00000381323 GJA10Q969M2 543 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 TMEM143Q96AN5 459 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 BICD1Q96G01 975 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 TTC12Q9H892 705 aaPredicted RBP8.72□□□□□ -1.01
FAM49A-201ENST00000381323 TLR9Q9NR96 1032 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 DPP7Q9UHL4 492 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 FRMPD4Q14CM0 1322 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.72□□□□□ -1.01
FAM49A-201ENST00000381323 MBTPS1Q14703 1052 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 ZNF174Q15697 407 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 HELQQ8TDG4 1101 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 TCF25Q9BQ70 676 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 PRG3Q9Y2Y8 225 aaPredicted RBP8.72□□□□□ -1.01
FAM49A-201ENST00000381323 RLFQ13129 1914 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 URODP06132 367 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 YWHABP31946 246 aaKnown RBP8.72□□□□□ -1.01
FAM49A-201ENST00000381323 OR1G1P47890 313 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 MXD4Q14582 209 aaPredicted RBP8.72□□□□□ -1.01
FAM49A-201ENST00000381323 PPP2R5AQ15172 486 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 TRIM71Q2Q1W2 868 aaKnown RBP8.72□□□□□ -1.01
FAM49A-201ENST00000381323 TPRNQ4KMQ1 711 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 ZNF410Q86VK4 478 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 CNNM3Q8NE01 707 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 DYDC2Q96IM9 177 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 EMILIN2Q9BXX0 1053 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 TYW1Q9NV66 732 aaKnown RBP8.72□□□□□ -1.01
FAM49A-201ENST00000381323 KANSL3Q9P2N6 904 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 GAS2O43903 313 aaKnown RBP8.72□□□□□ -1.01
FAM49A-201ENST00000381323 ALDH2P05091 517 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 FGFR1P11362 822 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 CIITAP33076 1130 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 NAALADL2Q58DX5 795 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 NEK9Q8TD19 979 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 STK24Q9Y6E0 443 aa8.72□□□□□ -1.01
FAM49A-201ENST00000381323 VPS37CA5D8V6 355 aaPredicted RBP8.71□□□□□ -1.01
FAM49A-201ENST00000381323 C2CD2LO14523 706 aa8.71□□□□□ -1.01
FAM49A-201ENST00000381323 HARSP12081 509 aaKnown RBP8.71□□□□□ -1.01
FAM49A-201ENST00000381323 KLRC2P26717 231 aa8.71□□□□□ -1.01
FAM49A-201ENST00000381323 TXLNAP40222 546 aa8.71□□□□□ -1.01
FAM49A-201ENST00000381323 NPEPPSP55786 919 aa8.71□□□□□ -1.01
FAM49A-201ENST00000381323 RABEP1Q15276 862 aa8.71□□□□□ -1.01
FAM49A-201ENST00000381323 FAM26DQ5JW98 314 aa8.71□□□□□ -1.01
FAM49A-201ENST00000381323 NOC3LQ8WTT2 800 aaKnown RBP8.71□□□□□ -1.01
FAM49A-201ENST00000381323 NGRNQ9NPE2 291 aaKnown RBP8.71□□□□□ -1.01
FAM49A-201ENST00000381323 CYP26B1Q9NR63 512 aa8.71□□□□□ -1.01
FAM49A-201ENST00000381323 POLIQ9UNA4 740 aa8.71□□□□□ -1.01
FAM49A-201ENST00000381323 FAN1Q9Y2M0 1017 aa8.71□□□□□ -1.01
FAM49A-201ENST00000381323 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.71□□□□□ -1.01
FAM49A-201ENST00000381323 MBLAC1A4D2B0 266 aaPredicted RBP8.71□□□□□ -1.01
FAM49A-201ENST00000381323 BTBD18B2RXH4 712 aa8.71□□□□□ -1.01
FAM49A-201ENST00000381323 GRM6O15303 877 aa8.71□□□□□ -1.01
FAM49A-201ENST00000381323 DTNBO60941 627 aa8.71□□□□□ -1.01
FAM49A-201ENST00000381323 FGF18O76093 207 aa8.71□□□□□ -1.01
FAM49A-201ENST00000381323 CXCL14O95715 111 aa8.71□□□□□ -1.01
FAM49A-201ENST00000381323 YARSP54577 528 aaKnown RBP8.71□□□□□ -1.01
FAM49A-201ENST00000381323 TOB2Q14106 344 aaPredicted RBP8.71□□□□□ -1.01
FAM49A-201ENST00000381323 SF3A1Q15459 793 aaKnown RBP8.71□□□□□ -1.01
FAM49A-201ENST00000381323 MOXD1Q6UVY6 613 aa8.71□□□□□ -1.01
FAM49A-201ENST00000381323 DBR1Q9UK59 544 aaKnown RBP8.71□□□□□ -1.01
FAM49A-201ENST00000381323 TPCN1Q9ULQ1 816 aa8.71□□□□□ -1.01
FAM49A-201ENST00000381323 RBM19Q9Y4C8 960 aaKnown RBP8.71□□□□□ -1.01
FAM49A-201ENST00000381323 GREB1LQ9C091 1923 aaPredicted RBP8.71□□□□□ -1.02
FAM49A-201ENST00000381323 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.71□□□□□ -1.02
FAM49A-201ENST00000381323 TBX3O15119 743 aa8.71□□□□□ -1.02
FAM49A-201ENST00000381323 TECP42680 631 aa8.71□□□□□ -1.02
FAM49A-201ENST00000381323 DHX8Q14562 1220 aaKnown RBP8.71□□□□□ -1.02
FAM49A-201ENST00000381323 EMC2Q15006 297 aa8.71□□□□□ -1.02
FAM49A-201ENST00000381323 PKN1Q16512 942 aa8.71□□□□□ -1.02
FAM49A-201ENST00000381323 MCPH1Q8NEM0 835 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms