RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 STK3Q13188 491 aa19.01■□□□□ 0.63
SMN2-201ENST00000380741 THNSL1Q8IYQ7 743 aa19.01■□□□□ 0.63
SMN2-201ENST00000380741 BLIDQ8IZY5 108 aa19.01■□□□□ 0.63
SMN2-201ENST00000380741 ZNF710Q8N1W2 664 aa19.01■□□□□ 0.63
SMN2-201ENST00000380741 COLGALT1Q8NBJ5 622 aa19.01■□□□□ 0.63
SMN2-201ENST00000380741 ZNF274Q96GC6 653 aaPredicted RBP19.01■□□□□ 0.63
SMN2-201ENST00000380741 AIFM3Q96NN9 605 aa19.01■□□□□ 0.63
SMN2-201ENST00000380741 TLR9Q9NR96 1032 aa19.01■□□□□ 0.63
SMN2-201ENST00000380741 ARIH1Q9Y4X5 557 aaPredicted RBP19.01■□□□□ 0.63
SMN2-201ENST00000380741 CYP3A7-CYP3A51PA0A087WV96 503 aa19■□□□□ 0.63
SMN2-201ENST00000380741 EYA4O95677 639 aa19■□□□□ 0.63
SMN2-201ENST00000380741 CYP3A7P24462 503 aa19■□□□□ 0.63
SMN2-201ENST00000380741 TBC1D8BQ0IIM8 1120 aa19■□□□□ 0.63
SMN2-201ENST00000380741 TARBP2Q15633 366 aaKnown RBP19■□□□□ 0.63
SMN2-201ENST00000380741 NPY5RQ15761 445 aa19■□□□□ 0.63
SMN2-201ENST00000380741 MIER3Q7Z3K6 550 aa19■□□□□ 0.63
SMN2-201ENST00000380741 DAGLBQ8NCG7 672 aa19■□□□□ 0.63
SMN2-201ENST00000380741 RDM1Q8NG50 284 aa19■□□□□ 0.63
SMN2-201ENST00000380741 MICAL1Q8TDZ2 1067 aa19■□□□□ 0.63
SMN2-201ENST00000380741 POP1Q99575 1024 aaKnown RBP19■□□□□ 0.63
SMN2-201ENST00000380741 TM6SF1Q9BZW5 370 aa19■□□□□ 0.63
SMN2-201ENST00000380741 TMEM117Q9H0C3 514 aa19■□□□□ 0.63
SMN2-201ENST00000380741 TLE6Q9H808 572 aa19■□□□□ 0.63
SMN2-201ENST00000380741 RNF19AQ9NV58 838 aa19■□□□□ 0.63
SMN2-201ENST00000380741 SEPT9Q9UHD8 586 aaPredicted RBP19■□□□□ 0.63
SMN2-201ENST00000380741 BARX2Q9UMQ3 279 aaPredicted RBP19■□□□□ 0.63
SMN2-201ENST00000380741 WDFY4Q6ZS81 3184 aa18.99■□□□□ 0.63
SMN2-201ENST00000380741 TMEM150BA6NC51 233 aa18.99■□□□□ 0.63
SMN2-201ENST00000380741 DARSP14868 501 aaKnown RBP18.99■□□□□ 0.63
SMN2-201ENST00000380741 ZSCAN20P17040 1043 aaPredicted RBP18.99■□□□□ 0.63
SMN2-201ENST00000380741 LAG3P18627 525 aa18.99■□□□□ 0.63
SMN2-201ENST00000380741 ERVFC1P60507 584 aa18.99■□□□□ 0.63
SMN2-201ENST00000380741 COASYQ13057 564 aa18.99■□□□□ 0.63
SMN2-201ENST00000380741 DRP2Q13474 957 aa18.99■□□□□ 0.63
SMN2-201ENST00000380741 CSPP1Q1MSJ5 1256 aa18.99■□□□□ 0.63
SMN2-201ENST00000380741 B3GNT9Q6UX72 402 aa18.99■□□□□ 0.63
SMN2-201ENST00000380741 LRRC55Q6ZSA7 311 aa18.99■□□□□ 0.63
SMN2-201ENST00000380741 SMRP1Q8NCR6 262 aa18.99■□□□□ 0.63
SMN2-201ENST00000380741 ETNPPLQ8TBG4 499 aa18.99■□□□□ 0.63
SMN2-201ENST00000380741 SCLT1Q96NL6 688 aa18.99■□□□□ 0.63
SMN2-201ENST00000380741 CASD1Q96PB1 797 aa18.99■□□□□ 0.63
SMN2-201ENST00000380741 MUC6Q6W4X9 2439 aa18.99■□□□□ 0.63
SMN2-201ENST00000380741 PER2O15055 1255 aa18.98■□□□□ 0.63
SMN2-201ENST00000380741 HOXA2O43364 376 aa18.98■□□□□ 0.63
SMN2-201ENST00000380741 FGFR4P22455 802 aa18.98■□□□□ 0.63
SMN2-201ENST00000380741 RBM10P98175 930 aaKnown RBP18.98■□□□□ 0.63
SMN2-201ENST00000380741 MTERF2Q49AM1 385 aa18.98■□□□□ 0.63
SMN2-201ENST00000380741 CPLX2Q6PUV4 134 aaKnown RBP18.98■□□□□ 0.63
SMN2-201ENST00000380741 ECHDC2Q86YB7 292 aa18.98■□□□□ 0.63
SMN2-201ENST00000380741 LRRC43Q8N309 656 aa18.98■□□□□ 0.63
SMN2-201ENST00000380741 NLRP7Q8WX94 980 aa18.98■□□□□ 0.63
SMN2-201ENST00000380741 MBOAT7Q96N66 472 aa18.98■□□□□ 0.63
SMN2-201ENST00000380741 CEP89Q96ST8 783 aa18.98■□□□□ 0.63
SMN2-201ENST00000380741 SH2D3AQ9BRG2 576 aa18.98■□□□□ 0.63
SMN2-201ENST00000380741 NIFKQ9BYG3 293 aaKnown RBP18.98■□□□□ 0.63
SMN2-201ENST00000380741 FSCN2O14926 492 aa18.97■□□□□ 0.63
SMN2-201ENST00000380741 CSDE1O75534 798 aaKnown RBP18.97■□□□□ 0.63
SMN2-201ENST00000380741 STBD1O95210 358 aa18.97■□□□□ 0.63
SMN2-201ENST00000380741 NONOQ15233 471 aaKnown RBP eCLIP18.97■□□□□ 0.63
SMN2-201ENST00000380741 INF2Q27J81 1249 aa18.97■□□□□ 0.63
SMN2-201ENST00000380741 XKR3Q5GH77 459 aa18.97■□□□□ 0.63
SMN2-201ENST00000380741 CLLU1OSQ5K130 101 aa18.97■□□□□ 0.63
SMN2-201ENST00000380741 GALNT17Q6IS24 598 aa18.97■□□□□ 0.63
SMN2-201ENST00000380741 MOXD1Q6UVY6 613 aa18.97■□□□□ 0.63
SMN2-201ENST00000380741 ABI1Q8IZP0 508 aa18.97■□□□□ 0.63
SMN2-201ENST00000380741 FAM177A1Q8N128 213 aaPredicted RBP18.97■□□□□ 0.63
SMN2-201ENST00000380741 RNF169Q8NCN4 708 aa18.97■□□□□ 0.63
SMN2-201ENST00000380741 VN1R2Q8NFZ6 395 aa18.97■□□□□ 0.63
SMN2-201ENST00000380741 PDRG1Q9NUG6 133 aa18.97■□□□□ 0.63
SMN2-201ENST00000380741 MUTYHQ9UIF7 546 aa18.97■□□□□ 0.63
SMN2-201ENST00000380741 KCNJ14Q9UNX9 436 aa18.97■□□□□ 0.63
SMN2-201ENST00000380741 IGKV6-21A0A0C4DH24 114 aa18.96■□□□□ 0.63
SMN2-201ENST00000380741 SLC37A4O43826 429 aa18.96■□□□□ 0.63
SMN2-201ENST00000380741 PBX3P40426 434 aa18.96■□□□□ 0.63
SMN2-201ENST00000380741 PLCB3Q01970 1234 aa18.96■□□□□ 0.63
SMN2-201ENST00000380741 DUSP6Q16828 381 aa18.96■□□□□ 0.63
SMN2-201ENST00000380741 PLPP4Q5VZY2 271 aa18.96■□□□□ 0.63
SMN2-201ENST00000380741 KCNT2Q6UVM3 1135 aa18.96■□□□□ 0.63
SMN2-201ENST00000380741 KRT25Q7Z3Z0 450 aa18.96■□□□□ 0.63
SMN2-201ENST00000380741 RNF135Q8IUD6 432 aa18.96■□□□□ 0.63
SMN2-201ENST00000380741 MRPS27Q92552 414 aaKnown RBP18.96■□□□□ 0.63
SMN2-201ENST00000380741 DDX25Q9UHL0 483 aaKnown RBP18.96■□□□□ 0.63
SMN2-201ENST00000380741 LZTS1Q9Y250 596 aa18.96■□□□□ 0.63
SMN2-201ENST00000380741 A0A0U1RQF3 1178 aa18.95■□□□□ 0.62
SMN2-201ENST00000380741 ATF7P17544 494 aaPredicted RBP18.95■□□□□ 0.62
SMN2-201ENST00000380741 SCRN1Q12765 414 aa18.95■□□□□ 0.62
SMN2-201ENST00000380741 HERC4Q5GLZ8 1057 aaPredicted RBP18.95■□□□□ 0.62
SMN2-201ENST00000380741 PDE12Q6L8Q7 609 aaKnown RBP18.95■□□□□ 0.62
SMN2-201ENST00000380741 ZNF598Q86UK7 904 aaKnown RBP18.95■□□□□ 0.62
SMN2-201ENST00000380741 ZNF558Q96NG5 402 aa18.95■□□□□ 0.62
SMN2-201ENST00000380741 CDCA3Q99618 268 aaPredicted RBP18.95■□□□□ 0.62
SMN2-201ENST00000380741 TCF25Q9BQ70 676 aa18.95■□□□□ 0.62
SMN2-201ENST00000380741 GCOM2Q9BZD3 368 aaPredicted RBP18.95■□□□□ 0.62
SMN2-201ENST00000380741 USP15Q9Y4E8 981 aaPredicted RBP18.95■□□□□ 0.62
SMN2-201ENST00000380741 TECTAO75443 2155 aa18.94■□□□□ 0.62
SMN2-201ENST00000380741 A0A087WZ62 844 aa18.94■□□□□ 0.62
SMN2-201ENST00000380741 FSD2A1L4K1 749 aa18.94■□□□□ 0.62
SMN2-201ENST00000380741 EOMESO95936 686 aa18.94■□□□□ 0.62
SMN2-201ENST00000380741 PPM1AP35813 382 aa18.94■□□□□ 0.62
SMN2-201ENST00000380741 LETM2Q2VYF4 491 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms