RNA–Protein interactions for RNA: ENST00000380518.7

COL2A1-202, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL2A1, Length 5,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-202ENST00000380518 TTC26A0AVF1 554 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 GSG1L2A8MUP6 293 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 ANXA13P27216 316 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 SLC12A1Q13621 1099 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 TAF1BQ53T94 588 aaPredicted RBP17.17■□□□□ 0.34
COL2A1-202ENST00000380518 GIMAP8Q8ND71 665 aaPredicted RBP17.17■□□□□ 0.34
COL2A1-202ENST00000380518 G3BP2Q9UN86 482 aaKnown RBP17.17■□□□□ 0.34
COL2A1-202ENST00000380518 SPATA31A3Q5VYP0 1347 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 CHEK2O96017 543 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 PMLP29590 882 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 EPHB1P54762 984 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 SYT2Q8N9I0 419 aaPredicted RBP17.17■□□□□ 0.34
COL2A1-202ENST00000380518 MYO3BQ8WXR4 1341 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 CHMP6Q96FZ7 201 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 ISCA1Q9BUE6 129 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 UBN1Q9NPG3 1134 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 NOC2LQ9Y3T9 749 aaKnown RBP17.17■□□□□ 0.34
COL2A1-202ENST00000380518 KIF1BO60333 1816 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 MROH7-TTC4A0A0A0MT08 1334 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 BANK1Q8NDB2 785 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 OSBPL9Q96SU4 736 aa17.17■□□□□ 0.34
COL2A1-202ENST00000380518 A0A1W2PQC6 194 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 RASA4BC9J798 803 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 RASA4O43374 803 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 TMPRSS15P98073 1019 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 DYDC2Q96IM9 177 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 TTC25Q96NG3 672 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 HEMGNQ9BXL5 484 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 TOPORSQ9NS56 1045 aaPredicted RBP17.16■□□□□ 0.34
COL2A1-202ENST00000380518 FNDC3AQ9Y2H6 1198 aaKnown RBP17.16■□□□□ 0.34
COL2A1-202ENST00000380518 KRT80Q6KB66 452 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 TRIM67Q6ZTA4 783 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 TBC1D1Q86TI0 1168 aaPredicted RBP17.16■□□□□ 0.34
COL2A1-202ENST00000380518 RNF168Q8IYW5 571 aaPredicted RBP17.16■□□□□ 0.34
COL2A1-202ENST00000380518 CELF1Q92879 486 aaKnown RBP17.16■□□□□ 0.34
COL2A1-202ENST00000380518 CCDC138Q96M89 665 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 ASNSD1Q9NWL6 643 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 SPDYE2BA6NHP3 402 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 NVLO15381 856 aaKnown RBP17.16■□□□□ 0.34
COL2A1-202ENST00000380518 CFLARO15519 480 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 SPDYE6P0CI01 402 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 HNRNPH2P55795 449 aaKnown RBP17.16■□□□□ 0.34
COL2A1-202ENST00000380518 ARPP19P56211 112 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 TNFAIP2Q03169 654 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 NAALADL2Q58DX5 795 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 DALRD3Q5D0E6 543 aaKnown RBP17.16■□□□□ 0.34
COL2A1-202ENST00000380518 TMEM270Q6UE05 265 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 TTC17Q96AE7 1141 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 FAM49AQ9H0Q0 323 aaPredicted RBP17.16■□□□□ 0.34
COL2A1-202ENST00000380518 PNMA3Q9UL41 463 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 GRID2IPA4D2P6 1211 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 GSTA4O15217 222 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 P4HBP07237 508 aaKnown RBP17.16■□□□□ 0.34
COL2A1-202ENST00000380518 SFNP31947 248 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 ZNF772Q68DY9 489 aaPredicted RBP17.16■□□□□ 0.34
COL2A1-202ENST00000380518 SYNE4Q8N205 404 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 NSUN6Q8TEA1 469 aaKnown RBP17.16■□□□□ 0.34
COL2A1-202ENST00000380518 DACT3Q96B18 629 aaPredicted RBP17.16■□□□□ 0.34
COL2A1-202ENST00000380518 C11orf70Q9BRQ4 267 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 TRAIPQ9BWF2 469 aa17.16■□□□□ 0.34
COL2A1-202ENST00000380518 UPF3AQ9H1J1 476 aaKnown RBP17.16■□□□□ 0.34
COL2A1-202ENST00000380518 ABCB11O95342 1321 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 ZNF335Q9H4Z2 1342 aaPredicted RBP17.15■□□□□ 0.34
COL2A1-202ENST00000380518 TEX33O43247 280 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 HSPA4LO95757 839 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 ATP2C1P98194 919 aaPredicted RBP17.15■□□□□ 0.34
COL2A1-202ENST00000380518 ZNF699Q32M78 642 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 CCDC124Q96CT7 223 aaKnown RBP17.15■□□□□ 0.34
COL2A1-202ENST00000380518 EDEM3Q9BZQ6 932 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 HOXC10Q9NYD6 342 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 PLA2R1Q13018 1463 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 SLC16A4O15374 487 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 ORC4O43929 436 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 QARSP47897 775 aaKnown RBP17.15■□□□□ 0.34
COL2A1-202ENST00000380518 VAMP7P51809 220 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 OCRLQ01968 901 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 SHC4Q6S5L8 630 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 TMEM260Q9NX78 707 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 ZDHHC9Q9Y397 364 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 PPME1Q9Y570 386 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 PLEKHG2Q9H7P9 1386 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 TBXAS1P24557 533 aaPredicted RBP17.15■□□□□ 0.34
COL2A1-202ENST00000380518 FAM213AQ9BRX8 229 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 TDRD3Q9H7E2 651 aaKnown RBP17.15■□□□□ 0.34
COL2A1-202ENST00000380518 CPDO75976 1380 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 DENND3A2RUS2 1198 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 DRAP1Q14919 205 aaPredicted RBP17.15■□□□□ 0.34
COL2A1-202ENST00000380518 AP1ARQ63HQ0 302 aa17.15■□□□□ 0.34
COL2A1-202ENST00000380518 ZNF564Q8TBZ8 553 aaPredicted RBP17.15■□□□□ 0.34
COL2A1-202ENST00000380518 CHRNA3P32297 505 aa17.14■□□□□ 0.34
COL2A1-202ENST00000380518 GGCXP38435 758 aa17.14■□□□□ 0.34
COL2A1-202ENST00000380518 KLHL38Q2WGJ6 581 aa17.14■□□□□ 0.34
COL2A1-202ENST00000380518 FAM8A1Q9UBU6 413 aa17.14■□□□□ 0.34
COL2A1-202ENST00000380518 A0A0G2JND7 137 aa17.14■□□□□ 0.33
COL2A1-202ENST00000380518 POTEFA5A3E0 1075 aa17.14■□□□□ 0.33
COL2A1-202ENST00000380518 POTEIP0CG38 1075 aa17.14■□□□□ 0.33
COL2A1-202ENST00000380518 PPARGP37231 505 aaPredicted RBP17.14■□□□□ 0.33
COL2A1-202ENST00000380518 GYS2P54840 703 aa17.14■□□□□ 0.33
COL2A1-202ENST00000380518 QRICH1Q2TAL8 776 aa17.14■□□□□ 0.33
COL2A1-202ENST00000380518 NFRKBQ6P4R8 1299 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms