RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 CATSPER1Q8NEC5 780 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 CD58P19256 250 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 PHKA2P46019 1235 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 EPHB4P54760 987 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 NAALADL2Q58DX5 795 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 DEPDC7Q96QD5 511 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 UNC13AQ9UPW8 1703 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 FAM186AA6NE01 2351 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 FAM160B2Q86V87 743 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 OOSP2Q86WS3 158 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 MRPS26Q9BYN8 205 aaKnown RBP11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 DMAP1Q9NPF5 467 aaPredicted RBP11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 HSPA4LO95757 839 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 TMPRSS15P98073 1019 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 ZNF594Q96JF6 807 aaPredicted RBP11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 RUBCNLQ9H714 662 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 ZNF556Q9HAH1 456 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 INPP5FQ9Y2H2 1132 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 EEPD1Q7L9B9 569 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 SPATA16Q9BXB7 569 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 ST8SIA6P61647 398 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 PPP4R3CPQ6ZMV5 832 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 HES6Q96HZ4 224 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 BTBD6Q96KE9 485 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 HMGXB3Q12766 1538 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 NDUFB5O43674 189 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 PRAMEP78395 509 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 DHTKD1Q96HY7 919 aaPredicted RBP11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 LSM7Q9UK45 103 aaKnown RBP11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 TK2O00142 265 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 TUBGCP2Q9BSJ2 902 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 DIAPH2O60879 1101 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 BRD2P25440 801 aaKnown RBP11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 GUCY2DQ02846 1103 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 NLRP4Q96MN2 994 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 UNC45AQ9H3U1 944 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 MYH1P12882 1939 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 MYH2Q9UKX2 1941 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 MYH4Q9Y623 1939 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 FAM107AO95990 144 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 NAA35Q5VZE5 725 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 MAD2L2Q9UI95 211 aa11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 MAP2P11137 1827 aaKnown RBP11.95□□□□□ -0.5
PTCHD1-201ENST00000379361 DCTN3O75935 186 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 TCP11X2Q5H9J9 407 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 WDR75Q8IWA0 830 aaKnown RBP11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 PMS2P54278 862 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 MTERF2Q49AM1 385 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 E7EWF7 191 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 FKBP3Q00688 224 aaKnown RBP11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 FAM196AQ6ZSG2 479 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 FANCBQ8NB91 859 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 RAET1EQ8TD07 263 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 KIRREL3Q8IZU9 778 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 PPP1R14AQ96A00 147 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 ARL8AQ96BM9 186 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 AIPL1Q9NZN9 384 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 AFF4Q9UHB7 1163 aaKnown RBP11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 FBXL5Q9UKA1 691 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 ATP5HO75947 161 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 KCNA2P16389 499 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 DHX9Q08211 1270 aaKnown RBP11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 SYTL3Q4VX76 610 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 ACSL3O95573 720 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 COPB2P35606 906 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 ANXA11P50995 505 aaKnown RBP11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 ZNF804BA4D1E1 1349 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 HUS1O60921 280 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 BBS9Q3SYG4 887 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 OR6B2Q6IFH4 312 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 PCDHA4Q9UN74 947 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 SBNO1A3KN83 1393 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 TRIP11Q15643 1979 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 MAST1Q9Y2H9 1570 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 SYNGAP1Q96PV0 1343 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 HIST1H2AGP0C0S8 130 aaPredicted RBP11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 CDH2P19022 906 aaPredicted RBP11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 HIST1H2ADP20671 130 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 JAK1P23458 1154 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 MDM2Q00987 491 aaPredicted RBP11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 HIST1H2AHQ96KK5 128 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 HIST1H2AJQ99878 128 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 H2AFJQ9BTM1 129 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 WDR47O94967 919 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 CALB1P05937 261 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 SNX17Q15036 470 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 RASSF3Q86WH2 238 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 MRPL48Q96GC5 212 aaKnown RBP11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 NUP214P35658 2090 aaPredicted RBP11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 RNF103-CHMP3A0A140T963 221 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 PJA2O43164 708 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 ANKS6Q68DC2 871 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 TOGARAM2Q6ZUX3 1019 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 TRIML2Q8N7C3 387 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 PRDM5Q9NQX1 630 aaPredicted RBP11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 PSD3Q9NYI0 1048 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 EHD2Q9NZN4 543 aa11.94□□□□□ -0.5
PTCHD1-201ENST00000379361 ZKSCAN8Q15776 578 aaPredicted RBP11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 SRLQ86TD4 932 aa11.93□□□□□ -0.5
PTCHD1-201ENST00000379361 SYMPKQ92797 1274 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms