RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 UHRF1Q96T88 793 aaPredicted RBP27.64■■■□□ 2.02
TNFRSF4-201ENST00000379236 LLPHQ9BRT6 129 aaKnown RBP27.64■■■□□ 2.02
TNFRSF4-201ENST00000379236 GCOM2Q9BZD3 368 aaPredicted RBP27.64■■■□□ 2.02
TNFRSF4-201ENST00000379236 ATP6V0A4Q9HBG4 840 aa27.64■■■□□ 2.02
TNFRSF4-201ENST00000379236 ANO5Q75V66 913 aa27.63■■■□□ 2.01
TNFRSF4-201ENST00000379236 EXOC8Q8IYI6 725 aa27.63■■■□□ 2.01
TNFRSF4-201ENST00000379236 CRIPAKQ8N1N5 446 aa27.63■■■□□ 2.01
TNFRSF4-201ENST00000379236 FAM184AQ8NB25 1140 aa27.63■■■□□ 2.01
TNFRSF4-201ENST00000379236 SLC7A3Q8WY07 619 aa27.63■■■□□ 2.01
TNFRSF4-201ENST00000379236 C8orf76Q96K31 380 aa27.63■■■□□ 2.01
TNFRSF4-201ENST00000379236 LXNQ9BS40 222 aa27.63■■■□□ 2.01
TNFRSF4-201ENST00000379236 NSUN3Q9H649 340 aaKnown RBP27.63■■■□□ 2.01
TNFRSF4-201ENST00000379236 SUCLA2Q9P2R7 463 aaPredicted RBP27.63■■■□□ 2.01
TNFRSF4-201ENST00000379236 TBKBP1A7MCY6 615 aa27.62■■■□□ 2.01
TNFRSF4-201ENST00000379236 C9IYK1 514 aa27.62■■■□□ 2.01
TNFRSF4-201ENST00000379236 TNFRSF10AO00220 468 aa27.62■■■□□ 2.01
TNFRSF4-201ENST00000379236 NEMFO60524 1076 aa27.62■■■□□ 2.01
TNFRSF4-201ENST00000379236 MAFO75444 373 aaPredicted RBP27.62■■■□□ 2.01
TNFRSF4-201ENST00000379236 STBD1O95210 358 aa27.62■■■□□ 2.01
TNFRSF4-201ENST00000379236 DARSP14868 501 aaKnown RBP27.62■■■□□ 2.01
TNFRSF4-201ENST00000379236 GATMP50440 423 aa27.62■■■□□ 2.01
TNFRSF4-201ENST00000379236 GUCY1B3Q02153 619 aa27.62■■■□□ 2.01
TNFRSF4-201ENST00000379236 ST3GAL1Q11201 340 aa27.62■■■□□ 2.01
TNFRSF4-201ENST00000379236 OTUD6AQ7L8S5 288 aa27.62■■■□□ 2.01
TNFRSF4-201ENST00000379236 RHPN2Q8IUC4 686 aa27.62■■■□□ 2.01
TNFRSF4-201ENST00000379236 CEP170P1Q96L14 293 aa27.62■■■□□ 2.01
TNFRSF4-201ENST00000379236 UBE2ZQ9H832 354 aaPredicted RBP27.62■■■□□ 2.01
TNFRSF4-201ENST00000379236 CYP26B1Q9NR63 512 aa27.62■■■□□ 2.01
TNFRSF4-201ENST00000379236 SH2B1Q9NRF2 756 aaPredicted RBP27.62■■■□□ 2.01
TNFRSF4-201ENST00000379236 TMEM161AQ9NX61 479 aa27.62■■■□□ 2.01
TNFRSF4-201ENST00000379236 PLXNA4Q9HCM2 1894 aa27.61■■■□□ 2.01
TNFRSF4-201ENST00000379236 CSPG5O95196 566 aa27.61■■■□□ 2.01
TNFRSF4-201ENST00000379236 LINC00271P0C7V0 271 aa27.61■■■□□ 2.01
TNFRSF4-201ENST00000379236 POLGP54098 1239 aaPredicted RBP27.61■■■□□ 2.01
TNFRSF4-201ENST00000379236 HMGN5P82970 282 aaKnown RBP27.61■■■□□ 2.01
TNFRSF4-201ENST00000379236 DRP2Q13474 957 aa27.61■■■□□ 2.01
TNFRSF4-201ENST00000379236 GNL2Q13823 731 aaKnown RBP27.61■■■□□ 2.01
TNFRSF4-201ENST00000379236 EP400NLQ6ZTU2 488 aa27.61■■■□□ 2.01
TNFRSF4-201ENST00000379236 INO80BQ9C086 356 aaPredicted RBP27.61■■■□□ 2.01
TNFRSF4-201ENST00000379236 UPF2Q9HAU5 1272 aaKnown RBP27.61■■■□□ 2.01
TNFRSF4-201ENST00000379236 AAASQ9NRG9 546 aa27.61■■■□□ 2.01
TNFRSF4-201ENST00000379236 PCDHA12Q9UN75 941 aa27.61■■■□□ 2.01
TNFRSF4-201ENST00000379236 PPME1Q9Y570 386 aa27.61■■■□□ 2.01
TNFRSF4-201ENST00000379236 GRM6O15303 877 aa27.6■■■□□ 2.01
TNFRSF4-201ENST00000379236 HOXA2O43364 376 aa27.6■■■□□ 2.01
TNFRSF4-201ENST00000379236 SFPQP23246 707 aaKnown RBP eCLIP27.6■■■□□ 2.01
TNFRSF4-201ENST00000379236 NAALADL2Q58DX5 795 aa27.6■■■□□ 2.01
TNFRSF4-201ENST00000379236 ZNF410Q86VK4 478 aa27.6■■■□□ 2.01
TNFRSF4-201ENST00000379236 ABI1Q8IZP0 508 aa27.6■■■□□ 2.01
TNFRSF4-201ENST00000379236 P2RX5Q93086 422 aa27.6■■■□□ 2.01
TNFRSF4-201ENST00000379236 DYDC2Q96IM9 177 aa27.6■■■□□ 2.01
TNFRSF4-201ENST00000379236 CCDC43Q96MW1 224 aaKnown RBP27.6■■■□□ 2.01
TNFRSF4-201ENST00000379236 ELAC1Q9H777 363 aaKnown RBP27.6■■■□□ 2.01
TNFRSF4-201ENST00000379236 ZSWIM4Q9H7M6 989 aa27.6■■■□□ 2.01
TNFRSF4-201ENST00000379236 A0A087WZ62 844 aa27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 IGKV6-21A0A0C4DH24 114 aa27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 BMP1P13497 986 aa27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 ATP2B1P20020 1258 aa27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 YWHABP31946 246 aaKnown RBP27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 RFC5P40937 340 aa27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 NPEPPSP55786 919 aa27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 CYP4A11Q02928 519 aa27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 DSC3Q14574 896 aa27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 TCEAL5Q5H9L2 206 aa27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 C4orf19Q8IY42 314 aa27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 RNF169Q8NCN4 708 aa27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 NLRP4Q96MN2 994 aa27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 CEP89Q96ST8 783 aa27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 FDXACB1Q9BRP7 624 aaPredicted RBP27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 ALG13Q9NP73 1137 aaKnown RBP27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 DACT1Q9NYF0 836 aa27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 PCDHB12Q9Y5F1 795 aa27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 BRWD1Q9NSI6 2320 aa27.59■■■□□ 2.01
TNFRSF4-201ENST00000379236 FGFR4P22455 802 aa27.58■■■□□ 2.01
TNFRSF4-201ENST00000379236 KCNA5P22460 613 aa27.58■■■□□ 2.01
TNFRSF4-201ENST00000379236 TXKP42681 527 aa27.58■■■□□ 2.01
TNFRSF4-201ENST00000379236 CTTNQ14247 550 aaKnown RBP27.58■■■□□ 2.01
TNFRSF4-201ENST00000379236 XKR9Q5GH70 373 aa27.58■■■□□ 2.01
TNFRSF4-201ENST00000379236 FAM102BQ5T8I3 360 aa27.58■■■□□ 2.01
TNFRSF4-201ENST00000379236 TPH2Q8IWU9 490 aa27.58■■■□□ 2.01
TNFRSF4-201ENST00000379236 TTC12Q9H892 705 aaPredicted RBP27.58■■■□□ 2.01
TNFRSF4-201ENST00000379236 RGL1Q9NZL6 768 aa27.58■■■□□ 2.01
TNFRSF4-201ENST00000379236 FGFR1P11362 822 aa27.57■■■□□ 2
TNFRSF4-201ENST00000379236 NEK9Q8TD19 979 aa27.57■■■□□ 2
TNFRSF4-201ENST00000379236 PPP2R3CQ969Q6 453 aa27.57■■■□□ 2
TNFRSF4-201ENST00000379236 PLAGL2Q9UPG8 496 aa27.57■■■□□ 2
TNFRSF4-201ENST00000379236 ST18O60284 1047 aa27.56■■■□□ 2
TNFRSF4-201ENST00000379236 CSDE1O75534 798 aaKnown RBP27.56■■■□□ 2
TNFRSF4-201ENST00000379236 RBM25P49756 843 aaKnown RBP27.56■■■□□ 2
TNFRSF4-201ENST00000379236 FAM189BP81408 668 aa27.56■■■□□ 2
TNFRSF4-201ENST00000379236 SPIRE1Q08AE8 756 aa27.56■■■□□ 2
TNFRSF4-201ENST00000379236 RABEP1Q15276 862 aa27.56■■■□□ 2
TNFRSF4-201ENST00000379236 KLHL23Q8NBE8 558 aa27.56■■■□□ 2
TNFRSF4-201ENST00000379236 TCP11Q8WWU5 503 aa27.56■■■□□ 2
TNFRSF4-201ENST00000379236 PSPC1Q8WXF1 523 aaKnown RBP27.56■■■□□ 2
TNFRSF4-201ENST00000379236 EIF2AK1Q9BQI3 630 aaKnown RBP27.56■■■□□ 2
TNFRSF4-201ENST00000379236 BMP2KQ9NSY1 1161 aaPredicted RBP27.56■■■□□ 2
TNFRSF4-201ENST00000379236 WRAP73Q9P2S5 460 aaPredicted RBP27.56■■■□□ 2
TNFRSF4-201ENST00000379236 COL4A3BPQ9Y5P4 624 aa27.56■■■□□ 2
TNFRSF4-201ENST00000379236 MYO7AQ13402 2215 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms