RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 BRAPQ7Z569 592 aa15.44■□□□□ 0.06
PRPF18-202ENST00000378572 RBM23Q86U06 439 aaKnown RBP15.44■□□□□ 0.06
PRPF18-202ENST00000378572 POF1BQ8WVV4 589 aa15.44■□□□□ 0.06
PRPF18-202ENST00000378572 FOXD4L4Q8WXT5 416 aaPredicted RBP15.44■□□□□ 0.06
PRPF18-202ENST00000378572 MAP7D2Q96T17 732 aa15.44■□□□□ 0.06
PRPF18-202ENST00000378572 PHF20Q9BVI0 1012 aa15.44■□□□□ 0.06
PRPF18-202ENST00000378572 CDHR5Q9HBB8 845 aa15.44■□□□□ 0.06
PRPF18-202ENST00000378572 C11orf16Q9NQ32 467 aa15.44■□□□□ 0.06
PRPF18-202ENST00000378572 C1orf112Q9NSG2 853 aa15.44■□□□□ 0.06
PRPF18-202ENST00000378572 GJB4Q9NTQ9 266 aa15.44■□□□□ 0.06
PRPF18-202ENST00000378572 VPS54Q9P1Q0 977 aa15.44■□□□□ 0.06
PRPF18-202ENST00000378572 PRKAG3Q9UGI9 489 aa15.44■□□□□ 0.06
PRPF18-202ENST00000378572 CD207Q9UJ71 328 aa15.44■□□□□ 0.06
PRPF18-202ENST00000378572 PCDHA10Q9Y5I2 948 aa15.44■□□□□ 0.06
PRPF18-202ENST00000378572 ADAMTS3O15072 1205 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 DHX15O43143 795 aaKnown RBP15.43■□□□□ 0.06
PRPF18-202ENST00000378572 MGEA5O60502 916 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 TBX10O75333 385 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 C22orf31O95567 290 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 U2AF2P26368 475 aaKnown RBP eCLIP15.43■□□□□ 0.06
PRPF18-202ENST00000378572 LTBRP36941 435 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 NRIP1P48552 1158 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 CLCN3P51790 818 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 SMAD4Q13485 552 aaKnown RBP15.43■□□□□ 0.06
PRPF18-202ENST00000378572 GALNT17Q6IS24 598 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 FERMT3Q86UX7 667 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 ADHFE1Q8IWW8 467 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 THNSL1Q8IYQ7 743 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 TMEM40Q8WWA1 233 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 FAM167AQ96KS9 214 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 POP1Q99575 1024 aaKnown RBP15.43■□□□□ 0.06
PRPF18-202ENST00000378572 ATP6V0A4Q9HBG4 840 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 MYH9P35579 1960 aaKnown RBP15.43■□□□□ 0.06
PRPF18-202ENST00000378572 WDR64B1ANS9 1081 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 DNAJB1P25685 340 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 IRS1P35568 1242 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 CRYBB1P53674 252 aaPredicted RBP15.43■□□□□ 0.06
PRPF18-202ENST00000378572 NLRP5P59047 1200 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 COL19A1Q14993 1142 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 SLC24A5Q71RS6 500 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 ADGRD2Q7Z7M1 963 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 SPPL3Q8TCT6 385 aa15.43■□□□□ 0.06
PRPF18-202ENST00000378572 FOXP1Q9H334 677 aaPredicted RBP15.43■□□□□ 0.06
PRPF18-202ENST00000378572 EVPLQ92817 2033 aa15.42■□□□□ 0.06
PRPF18-202ENST00000378572 MBTPS2O43462 519 aa15.42■□□□□ 0.06
PRPF18-202ENST00000378572 GAS7O60861 476 aa15.42■□□□□ 0.06
PRPF18-202ENST00000378572 ATP4AP20648 1035 aa15.42■□□□□ 0.06
PRPF18-202ENST00000378572 TMOD1P28289 359 aa15.42■□□□□ 0.06
PRPF18-202ENST00000378572 CTC1Q2NKJ3 1217 aa15.42■□□□□ 0.06
PRPF18-202ENST00000378572 FAM102BQ5T8I3 360 aa15.42■□□□□ 0.06
PRPF18-202ENST00000378572 ATL3Q6DD88 541 aa15.42■□□□□ 0.06
PRPF18-202ENST00000378572 MCTP1Q6DN14 999 aa15.42■□□□□ 0.06
PRPF18-202ENST00000378572 FAM228AQ86W67 206 aa15.42■□□□□ 0.06
PRPF18-202ENST00000378572 DIS3L2Q8IYB7 885 aaKnown RBP15.42■□□□□ 0.06
PRPF18-202ENST00000378572 LRRC71Q8N4P6 559 aa15.42■□□□□ 0.06
PRPF18-202ENST00000378572 RNF169Q8NCN4 708 aa15.42■□□□□ 0.06
PRPF18-202ENST00000378572 ZNF668Q96K58 619 aaPredicted RBP15.42■□□□□ 0.06
PRPF18-202ENST00000378572 BRMS1Q9HCU9 246 aa15.42■□□□□ 0.06
PRPF18-202ENST00000378572 RGS18Q9NS28 235 aa15.42■□□□□ 0.06
PRPF18-202ENST00000378572 KCNJ14Q9UNX9 436 aa15.42■□□□□ 0.06
PRPF18-202ENST00000378572 PCDHGC5Q9Y5F6 944 aa15.42■□□□□ 0.06
PRPF18-202ENST00000378572 PRR33A8MZF0 331 aa15.41■□□□□ 0.06
PRPF18-202ENST00000378572 ZBTB42B2RXF5 422 aa15.41■□□□□ 0.06
PRPF18-202ENST00000378572 OATP04181 439 aa15.41■□□□□ 0.06
PRPF18-202ENST00000378572 FGFR1P11362 822 aa15.41■□□□□ 0.06
PRPF18-202ENST00000378572 PRKCEQ02156 737 aa15.41■□□□□ 0.06
PRPF18-202ENST00000378572 NPY5RQ15761 445 aa15.41■□□□□ 0.06
PRPF18-202ENST00000378572 SMAD2Q15796 467 aaKnown RBP15.41■□□□□ 0.06
PRPF18-202ENST00000378572 ABI1Q8IZP0 508 aa15.41■□□□□ 0.06
PRPF18-202ENST00000378572 DAGLBQ8NCG7 672 aa15.41■□□□□ 0.06
PRPF18-202ENST00000378572 CRYGNQ8WXF5 182 aa15.41■□□□□ 0.06
PRPF18-202ENST00000378572 TLE6Q9H808 572 aa15.41■□□□□ 0.06
PRPF18-202ENST00000378572 MAFBQ9Y5Q3 323 aaPredicted RBP15.41■□□□□ 0.06
PRPF18-202ENST00000378572 GOLGA6L22H0YM25 854 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 MAGEB2O15479 319 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 MCM4P33991 863 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 KRT2P35908 639 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 NLRP11P59045 1033 aaKnown RBP15.4■□□□□ 0.06
PRPF18-202ENST00000378572 CAMK1Q14012 370 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 NFKBIBQ15653 356 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 LRCH2Q5VUJ6 765 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 EFCAB12Q6NXP0 572 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 CRIPAKQ8N1N5 446 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 TEKT3Q9BXF9 490 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 DISC1Q9NRI5 854 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 NRBP2Q9NSY0 501 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 HCSTQ9UBK5 93 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 BARX2Q9UMQ3 279 aaPredicted RBP15.4■□□□□ 0.06
PRPF18-202ENST00000378572 PLXNA4Q9HCM2 1894 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 DDX11L8A8MPP1 907 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 ZSCAN20P17040 1043 aaPredicted RBP15.4■□□□□ 0.06
PRPF18-202ENST00000378572 KRT85P78386 507 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 ADAM15Q13444 863 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 EFHBQ8N7U6 833 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 COLGALT1Q8NBJ5 622 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 TLR9Q9NR96 1032 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 TYW1Q9NV66 732 aaKnown RBP15.4■□□□□ 0.06
PRPF18-202ENST00000378572 TMEM161AQ9NX61 479 aa15.4■□□□□ 0.06
PRPF18-202ENST00000378572 SEPT9Q9UHD8 586 aaPredicted RBP15.4■□□□□ 0.06
PRPF18-202ENST00000378572 PCDHA4Q9UN74 947 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms