RNA–Protein interactions for RNA: ENST00000378526.8

LIG3-202, Transcript of DNA ligase 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene LIG3, Length 8,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-202ENST00000378526 CFAP69A5D8W1 941 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 IGHDP01880 384 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 GRM1Q13255 1194 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 ACAP2Q15057 778 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 ADAT2Q7Z6V5 191 aaKnown RBP9.28□□□□□ -0.92
LIG3-202ENST00000378526 WDR70Q9NW82 654 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 FGD6Q6ZV73 1430 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 ZMYND10O75800 440 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 ZNF18P17022 549 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 NFKBIAP25963 317 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 RPL19P84098 196 aaKnown RBP9.28□□□□□ -0.92
LIG3-202ENST00000378526 LRRC36Q1X8D7 754 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 MYOCDQ8IZQ8 938 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 MYCT1Q8N699 235 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 ALKBH8Q96BT7 664 aaKnown RBP9.28□□□□□ -0.92
LIG3-202ENST00000378526 LRRC2Q9BYS8 371 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 TRMT6Q9UJA5 497 aaKnown RBP9.28□□□□□ -0.92
LIG3-202ENST00000378526 ING4Q9UNL4 249 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 SLC4A4Q9Y6R1 1079 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 UHRF1BP1Q6BDS2 1440 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 APOL1O14791 398 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 ARL4CP56559 192 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 STX5Q13190 355 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 ZNF174Q15697 407 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 MBIPQ9NS73 344 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 POTEIP0CG38 1075 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 CD19P15391 556 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 ROR2Q01974 943 aaKnown RBP9.28□□□□□ -0.92
LIG3-202ENST00000378526 C1DQ13901 141 aaKnown RBP9.28□□□□□ -0.92
LIG3-202ENST00000378526 TOGARAM2Q6ZUX3 1019 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 DIS3LQ8TF46 1054 aaKnown RBP9.28□□□□□ -0.92
LIG3-202ENST00000378526 CAPSLQ8WWF8 208 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 CCT8L2Q96SF2 557 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 ACAD9Q9H845 621 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 PAG1Q9NWQ8 432 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 RSL24D1Q9UHA3 163 aaKnown RBP9.28□□□□□ -0.92
LIG3-202ENST00000378526 NR1I2O75469 434 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 USP1O94782 785 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 FBXW4P57775 412 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 RAB2AP61019 212 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 USF2Q15853 346 aaPredicted RBP9.28□□□□□ -0.92
LIG3-202ENST00000378526 NEK10Q6ZWH5 1172 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 PACSIN1Q9BY11 444 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 KLHL4Q9C0H6 718 aa9.28□□□□□ -0.92
LIG3-202ENST00000378526 REXO4Q9GZR2 422 aaKnown RBP9.28□□□□□ -0.92
LIG3-202ENST00000378526 MTO1Q9Y2Z2 717 aaKnown RBP9.28□□□□□ -0.92
LIG3-202ENST00000378526 PIPSLA2A3N6 862 aa9.27□□□□□ -0.92
LIG3-202ENST00000378526 TYW5A2RUC4 315 aaKnown RBP9.27□□□□□ -0.92
LIG3-202ENST00000378526 UBXN8O00124 270 aa9.27□□□□□ -0.92
LIG3-202ENST00000378526 PTPN12Q05209 780 aaKnown RBP9.27□□□□□ -0.92
LIG3-202ENST00000378526 IFRD2Q12894 506 aaPredicted RBP9.27□□□□□ -0.92
LIG3-202ENST00000378526 PKN2Q16513 984 aaKnown RBP9.27□□□□□ -0.92
LIG3-202ENST00000378526 WAPLQ7Z5K2 1190 aa9.27□□□□□ -0.92
LIG3-202ENST00000378526 SERHL2Q9H4I8 314 aa9.27□□□□□ -0.92
LIG3-202ENST00000378526 SERHLQ9NQF3 203 aa9.27□□□□□ -0.92
LIG3-202ENST00000378526 BAIAP2Q9UQB8 552 aa9.27□□□□□ -0.92
LIG3-202ENST00000378526 ZNF233A6NK53 670 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 ARIH2O95376 493 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 MAPK4P31152 587 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 MAGEA2P43356 314 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 KSR1Q8IVT5 923 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 BEST2Q8NFU1 509 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 RHPN1Q8TCX5 695 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 ZNF473Q8WTR7 871 aaKnown RBP9.27□□□□□ -0.93
LIG3-202ENST00000378526 COG1Q8WTW3 980 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 FAM129BQ96TA1 746 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 CYP4F11Q9HBI6 524 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 PFDN2Q9UHV9 154 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 SNX2O60749 519 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 MYL1P05976 194 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 UBTFL6P0CB48 400 aaPredicted RBP9.27□□□□□ -0.93
LIG3-202ENST00000378526 ATP6V1B1P15313 513 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 JAK1P23458 1154 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 RGS2P41220 211 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 PRAMEP78395 509 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 SCRN1Q12765 414 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 LPCAT2Q7L5N7 544 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 INPP5DQ92835 1189 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 MLXQ9UH92 298 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 NSD2O96028 1365 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 PPP1R37O75864 691 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 APOA4P06727 396 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 MDH1P40925 334 aaKnown RBP9.27□□□□□ -0.93
LIG3-202ENST00000378526 STARP49675 285 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 PTK2Q05397 1052 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 MZT2BQ6NZ67 158 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 KRT27Q7Z3Y8 459 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 CHID1Q9BWS9 393 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 TAF1DQ9H5J8 278 aaPredicted RBP9.27□□□□□ -0.93
LIG3-202ENST00000378526 SLC40A1Q9NP59 571 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 DCTN4Q9UJW0 460 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 SSH2Q76I76 1423 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 BACH1O14867 736 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 PFKFB2O60825 505 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 SP100P23497 879 aaPredicted RBP9.27□□□□□ -0.93
LIG3-202ENST00000378526 STAT5AP42229 794 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 STAT5BP51692 787 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 ATP1A4Q13733 1029 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 MYBPC2Q14324 1141 aa9.27□□□□□ -0.93
LIG3-202ENST00000378526 TRIP10Q15642 601 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms