RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 TCP11X1B4DZS4 312 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 HNRNPCL1O60812 293 aaKnown RBP12.6□□□□□ -0.39
NPHP4-202ENST00000378161 CNOT3O75175 753 aaKnown RBP12.6□□□□□ -0.39
NPHP4-202ENST00000378161 SERPINB6P35237 376 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 PTPN12Q05209 780 aaKnown RBP12.6□□□□□ -0.39
NPHP4-202ENST00000378161 BTKQ06187 659 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 CALCOCO2Q13137 446 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 ITGA9Q13797 1035 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 QPCTQ16769 361 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 C15orf59Q2T9L4 293 aaPredicted RBP12.6□□□□□ -0.39
NPHP4-202ENST00000378161 TTC39CQ8N584 583 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 CDHR1Q96JP9 859 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 CEP44Q9C0F1 390 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 DDX25Q9UHL0 483 aaKnown RBP12.6□□□□□ -0.39
NPHP4-202ENST00000378161 FBXL5Q9UKA1 691 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 KCNJ14Q9UNX9 436 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 PTPRMP28827 1452 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 A2ML1A8K2U0 1454 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 ARPC4-TTLL3A0A0A6YYG9 625 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 ASLP04424 464 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 FUT4P22083 530 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 POLR2FP61218 127 aaKnown RBP12.6□□□□□ -0.39
NPHP4-202ENST00000378161 PPARAQ07869 468 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 RALGDSQ12967 914 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 KRT81Q14533 505 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 CEP78Q5JTW2 689 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 NUDCD3Q8IVD9 361 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 RFWD2Q8NHY2 731 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 NAT14Q8WUY8 206 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 LPIN2Q92539 896 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 DDX50Q9BQ39 737 aaKnown RBP12.6□□□□□ -0.39
NPHP4-202ENST00000378161 TMEM60Q9H2L4 133 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 ARMT1Q9H993 441 aa12.6□□□□□ -0.39
NPHP4-202ENST00000378161 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.6□□□□□ -0.39
NPHP4-202ENST00000378161 CRB1P82279 1406 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 TSPOAP1O95153 1857 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 SERPINI2O75830 405 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 DDX5P17844 614 aaKnown RBP12.59□□□□□ -0.39
NPHP4-202ENST00000378161 TRPC1P48995 793 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 NAA20P61599 178 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 ASPHQ12797 758 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 FXNQ16595 210 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 TTC38Q5R3I4 469 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 SLC43A3Q8NBI5 491 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 FLCNQ8NFG4 579 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 HPS3Q969F9 1004 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 PRPF18Q99633 342 aaKnown RBP12.59□□□□□ -0.39
NPHP4-202ENST00000378161 ZNF184Q99676 751 aaPredicted RBP12.59□□□□□ -0.39
NPHP4-202ENST00000378161 CUEDC2Q9H467 287 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 PLGRKTQ9HBL7 147 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 DISC1Q9NRI5 854 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 DOLKQ9UPQ8 538 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 V9GY48 417 aaPredicted RBP12.59□□□□□ -0.39
NPHP4-202ENST00000378161 MAST3O60307 1309 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 WDR91A4D1P6 747 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 LDHBP07195 334 aaKnown RBP12.59□□□□□ -0.39
NPHP4-202ENST00000378161 PORP16435 677 aaPredicted RBP12.59□□□□□ -0.39
NPHP4-202ENST00000378161 HOXD11P31277 338 aaPredicted RBP12.59□□□□□ -0.39
NPHP4-202ENST00000378161 ZNF76P36508 570 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 NCALDP61601 193 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 HEATR3Q7Z4Q2 680 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 O00370 1275 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 HAUS5O94927 633 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 CLPTM1O96005 669 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 ESRRAP11474 423 aaPredicted RBP12.59□□□□□ -0.39
NPHP4-202ENST00000378161 CDH3P22223 829 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 STRN3Q13033 797 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 MKRN3Q13064 507 aaKnown RBP12.59□□□□□ -0.39
NPHP4-202ENST00000378161 TCIRG1Q13488 830 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 ZNF713Q8N859 430 aaPredicted RBP12.59□□□□□ -0.39
NPHP4-202ENST00000378161 ERP27Q96DN0 273 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 SENP2Q9HC62 589 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 METTL14Q9HCE5 456 aaKnown RBP12.59□□□□□ -0.39
NPHP4-202ENST00000378161 VAT1LQ9HCJ6 419 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 ANLNQ9NQW6 1124 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 FGFR1OP2Q9NVK5 253 aa12.59□□□□□ -0.39
NPHP4-202ENST00000378161 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.59□□□□□ -0.39
NPHP4-202ENST00000378161 RBMX2Q9Y388 322 aaKnown RBP12.59□□□□□ -0.39
NPHP4-202ENST00000378161 KRIT1O00522 736 aa12.58□□□□□ -0.39
NPHP4-202ENST00000378161 RASGRF2O14827 1237 aa12.58□□□□□ -0.39
NPHP4-202ENST00000378161 ZWINTO95229 277 aa12.58□□□□□ -0.39
NPHP4-202ENST00000378161 DRD4P21917 467 aa12.58□□□□□ -0.39
NPHP4-202ENST00000378161 MRPS15P82914 257 aaKnown RBP12.58□□□□□ -0.39
NPHP4-202ENST00000378161 GRIN1Q05586 938 aa12.58□□□□□ -0.39
NPHP4-202ENST00000378161 NSUN2Q08J23 767 aaKnown RBP eCLIP12.58□□□□□ -0.39
NPHP4-202ENST00000378161 TMCO4Q5TGY1 634 aa12.58□□□□□ -0.39
NPHP4-202ENST00000378161 LRRC74BQ6ZQY2 392 aa12.58□□□□□ -0.39
NPHP4-202ENST00000378161 DGCR14Q96DF8 476 aaKnown RBP12.58□□□□□ -0.39
NPHP4-202ENST00000378161 TRPV5Q9NQA5 729 aa12.58□□□□□ -0.39
NPHP4-202ENST00000378161 INO80Q9ULG1 1556 aaPredicted RBP12.58□□□□□ -0.39
NPHP4-202ENST00000378161 STK24Q9Y6E0 443 aa12.58□□□□□ -0.39
NPHP4-202ENST00000378161 USP42Q9H9J4 1324 aaKnown RBP12.58□□□□□ -0.4
NPHP4-202ENST00000378161 NEURL4Q96JN8 1562 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 A6NJR5 290 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 SPDYE16A6NNV3 312 aaPredicted RBP12.58□□□□□ -0.4
NPHP4-202ENST00000378161 BOLA2-SMG1P6H3BVE0 249 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 TIMM44O43615 452 aa12.58□□□□□ -0.4
NPHP4-202ENST00000378161 PPARGP37231 505 aaPredicted RBP12.58□□□□□ -0.4
NPHP4-202ENST00000378161 KIF23Q02241 960 aaPredicted RBP12.58□□□□□ -0.4
NPHP4-202ENST00000378161 LRRC24Q50LG9 513 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms