RNA–Protein interactions for RNA: ENST00000378026.4

CKAP4-201, Transcript of cytoskeleton associated protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKAP4, Length 3,093 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-201ENST00000378026 ATP2A2P16615 1042 aaKnown RBP17.17■□□□□ 0.34
CKAP4-201ENST00000378026 RPL21P46778 160 aaKnown RBP17.17■□□□□ 0.34
CKAP4-201ENST00000378026 CASP4P49662 377 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 EIF6P56537 245 aaKnown RBP17.17■□□□□ 0.34
CKAP4-201ENST00000378026 RNASELQ05823 741 aaKnown RBP17.17■□□□□ 0.34
CKAP4-201ENST00000378026 FITM2Q8N6M3 262 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 GCNT4Q9P109 453 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 PCDHB13Q9Y5F0 798 aa17.17■□□□□ 0.34
CKAP4-201ENST00000378026 DLEC1Q9Y238 1755 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 SUN1O94901 812 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 ACSL3O95573 720 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 AGTP01019 485 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 HIBADHP31937 336 aaKnown RBP17.16■□□□□ 0.34
CKAP4-201ENST00000378026 INHBEP58166 350 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 LNX1Q8TBB1 728 aaPredicted RBP17.16■□□□□ 0.34
CKAP4-201ENST00000378026 ALG3Q92685 438 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 PLCD4Q9BRC7 762 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 BCAS3Q9H6U6 928 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 ADAM22Q9P0K1 906 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 PCDHA12Q9UN75 941 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 LRP5O75197 1615 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 PAPPAQ13219 1627 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 DDX3YO15523 660 aaKnown RBP17.16■□□□□ 0.34
CKAP4-201ENST00000378026 ABL2P42684 1182 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 LACTBP83111 547 aaPredicted RBP17.16■□□□□ 0.34
CKAP4-201ENST00000378026 ATP11AP98196 1134 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 ADCY2Q08462 1091 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 AUHQ13825 339 aaKnown RBP17.16■□□□□ 0.34
CKAP4-201ENST00000378026 ERFEQ4G0M1 354 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 EXOC3L1Q86VI1 746 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 TXNRD3Q86VQ6 643 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 EGFL6Q8IUX8 553 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 ARHGEF26Q96DR7 871 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 SPZ1Q9BXG8 430 aa17.16■□□□□ 0.34
CKAP4-201ENST00000378026 DDX25Q9UHL0 483 aaKnown RBP17.16■□□□□ 0.34
CKAP4-201ENST00000378026 MPHOSPH10O00566 681 aaKnown RBP17.15■□□□□ 0.34
CKAP4-201ENST00000378026 IKZF4Q9H2S9 585 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 A0A1B0GUL6 1792 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 TMEM120BA0PK00 339 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 MEIS1O00470 390 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 GH1P01241 217 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 RASA1P20936 1047 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 STAT3P40763 770 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 KCNJ1P48048 391 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 ADCY7P51828 1080 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 MAPK7Q13164 816 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 PDIA5Q14554 519 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 AP1ARQ63HQ0 302 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 CTNNBL1Q8WYA6 563 aaPredicted RBP17.15■□□□□ 0.34
CKAP4-201ENST00000378026 RMDN2Q96LZ7 410 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 EYA3Q99504 573 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 OSBPL1AQ9BXW6 950 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 CTNNAL1Q9UBT7 734 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 PCDHA2Q9Y5H9 948 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 ZNF142P52746 1687 aaPredicted RBP17.15■□□□□ 0.34
CKAP4-201ENST00000378026 AKAP3O75969 853 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 PDHA1P08559 390 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 DPY19L2P1Q6NXN4 242 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 SEPT14Q6ZU15 432 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 HAS1Q92839 578 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 DDX23Q9BUQ8 820 aaKnown RBP17.15■□□□□ 0.34
CKAP4-201ENST00000378026 GPCPD1Q9NPB8 672 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 TAS2R14Q9NYV8 317 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 GRHL1Q9NZI5 618 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 RASAL2Q9UJF2 1139 aa17.15■□□□□ 0.34
CKAP4-201ENST00000378026 ANKRD63C9JTQ0 380 aa17.14■□□□□ 0.33
CKAP4-201ENST00000378026 ALADP13716 330 aa17.14■□□□□ 0.33
CKAP4-201ENST00000378026 MARCKSL1P49006 195 aa17.14■□□□□ 0.33
CKAP4-201ENST00000378026 TNIP1Q15025 636 aa17.14■□□□□ 0.33
CKAP4-201ENST00000378026 C11orf91Q3C1V1 193 aa17.14■□□□□ 0.33
CKAP4-201ENST00000378026 GNPTABQ3T906 1256 aa17.14■□□□□ 0.33
CKAP4-201ENST00000378026 TAOK1Q7L7X3 1001 aa17.14■□□□□ 0.33
CKAP4-201ENST00000378026 COL23A1Q86Y22 540 aaPredicted RBP17.14■□□□□ 0.33
CKAP4-201ENST00000378026 ARHGEF2Q92974 986 aaKnown RBP17.14■□□□□ 0.33
CKAP4-201ENST00000378026 LZTS2Q9BRK4 669 aa17.14■□□□□ 0.33
CKAP4-201ENST00000378026 ETNK1Q9HBU6 452 aa17.14■□□□□ 0.33
CKAP4-201ENST00000378026 MTRF1LQ9UGC7 380 aaKnown RBP17.14■□□□□ 0.33
CKAP4-201ENST00000378026 TAF1P21675 1872 aa17.14■□□□□ 0.33
CKAP4-201ENST00000378026 MARSP56192 900 aaKnown RBP17.14■□□□□ 0.33
CKAP4-201ENST00000378026 BNIP1Q12981 228 aa17.14■□□□□ 0.33
CKAP4-201ENST00000378026 PLS1Q14651 629 aa17.14■□□□□ 0.33
CKAP4-201ENST00000378026 FBXO33Q7Z6M2 555 aa17.14■□□□□ 0.33
CKAP4-201ENST00000378026 THAP2Q9H0W7 228 aa17.14■□□□□ 0.33
CKAP4-201ENST00000378026 NKX1-2Q9UD57 310 aaPredicted RBP17.14■□□□□ 0.33
CKAP4-201ENST00000378026 TBK1Q9UHD2 729 aa17.14■□□□□ 0.33
CKAP4-201ENST00000378026 BCS1LQ9Y276 419 aa17.14■□□□□ 0.33
CKAP4-201ENST00000378026 POTEFA5A3E0 1075 aa17.13■□□□□ 0.33
CKAP4-201ENST00000378026 RIPK2O43353 540 aa17.13■□□□□ 0.33
CKAP4-201ENST00000378026 LINGO3P0C6S8 592 aa17.13■□□□□ 0.33
CKAP4-201ENST00000378026 POTEIP0CG38 1075 aa17.13■□□□□ 0.33
CKAP4-201ENST00000378026 STAT1P42224 750 aa17.13■□□□□ 0.33
CKAP4-201ENST00000378026 SNX1Q13596 522 aa17.13■□□□□ 0.33
CKAP4-201ENST00000378026 POTEGQ6S5H5 508 aa17.13■□□□□ 0.33
CKAP4-201ENST00000378026 POTEEQ6S8J3 1075 aa17.13■□□□□ 0.33
CKAP4-201ENST00000378026 IFT74Q96LB3 600 aa17.13■□□□□ 0.33
CKAP4-201ENST00000378026 POP1Q99575 1024 aaKnown RBP17.13■□□□□ 0.33
CKAP4-201ENST00000378026 COL5A2P05997 1499 aaPredicted RBP17.13■□□□□ 0.33
CKAP4-201ENST00000378026 CYP11B2P19099 503 aa17.13■□□□□ 0.33
CKAP4-201ENST00000378026 FAM47EQ6ZV65 393 aa17.13■□□□□ 0.33
CKAP4-201ENST00000378026 SPATA21Q7Z572 469 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms