RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 KCTD17Q8N5Z5 321 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 RPS6KC1Q96S38 1066 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 EIF3CQ99613 913 aaKnown RBP15.68■□□□□ 0.1
TCOF1-202ENST00000377797 UNC45AQ9H3U1 944 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 GYPCP04921 128 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 ZNF568Q3ZCX4 644 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 KRT39Q6A163 491 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 TRIM11Q96F44 468 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 MOV10L1Q9BXT6 1211 aaKnown RBP15.68■□□□□ 0.1
TCOF1-202ENST00000377797 INTS2Q9H0H0 1204 aaKnown RBP15.68■□□□□ 0.1
TCOF1-202ENST00000377797 TMEM143Q96AN5 459 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 TIPINQ9BVW5 301 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 FAM204AQ9H8W3 233 aa15.68■□□□□ 0.1
TCOF1-202ENST00000377797 KDM3BQ7LBC6 1761 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 GOLGA6CA6NDK9 693 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 GOLGA6DP0CG33 693 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 PDXDC1Q6P996 788 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 KCNV1Q6PIU1 500 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 SLC30A10Q6XR72 485 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 GOLGA6AQ9NYA3 693 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 NUB1Q9Y5A7 615 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 GOLGA8SH3BPF8 625 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 ZNF394Q53GI3 561 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 KSR1Q8IVT5 923 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 SMAP1Q8IYB5 467 aaPredicted RBP15.67■□□□□ 0.1
TCOF1-202ENST00000377797 MIS12Q9H081 205 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 KCNK9Q9NPC2 374 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 RSPH10B2B2RC85 870 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 PGRMC1O00264 195 aaKnown RBP15.67■□□□□ 0.1
TCOF1-202ENST00000377797 RSPH10BP0C881 870 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 PLS3P13797 630 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 OAS2P29728 719 aaKnown RBP15.67■□□□□ 0.1
TCOF1-202ENST00000377797 PHKA2P46019 1235 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 MAGOHBQ96A72 148 aaKnown RBP15.67■□□□□ 0.1
TCOF1-202ENST00000377797 PRKCEQ02156 737 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 SLC51AQ86UW1 340 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 RUSC1Q9BVN2 902 aa15.67■□□□□ 0.1
TCOF1-202ENST00000377797 AGO2Q9UKV8 859 aaKnown RBP15.67■□□□□ 0.1
TCOF1-202ENST00000377797 KCNJ6P48051 423 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 RNF149Q8NC42 400 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 AFAP1L1Q8TED9 768 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 RNF14Q9UBS8 474 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 PFASO15067 1338 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 SLC25A27O95847 323 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 SYTL5Q8TDW5 730 aaPredicted RBP15.66■□□□□ 0.1
TCOF1-202ENST00000377797 MED10Q9BTT4 135 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 SCN11AQ9UI33 1791 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 E7EVH7 732 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 C2orf54Q08AI8 447 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 NFX1Q12986 1120 aaKnown RBP15.66■□□□□ 0.1
TCOF1-202ENST00000377797 TTI2Q6NXR4 508 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 RAD9BQ6WBX8 426 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 ERO1BQ86YB8 467 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 RSPH14Q9UHP6 348 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 SRGAP2O75044 1071 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 PALMO75781 387 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 CALRP27797 417 aaKnown RBP15.66■□□□□ 0.1
TCOF1-202ENST00000377797 Q4G0T1 1027 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 RUFY4Q6ZNE9 571 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 WDR24Q96S15 920 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 NUDT12Q9BQG2 462 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 PARD6BQ9BYG5 372 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 HSPBP1Q9NZL4 362 aa15.66■□□□□ 0.1
TCOF1-202ENST00000377797 SARSP49591 514 aaKnown RBP15.65■□□□□ 0.1
TCOF1-202ENST00000377797 GPD1LQ8N335 351 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 GPRASP2Q96D09 838 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 MRRFQ96E11 262 aaKnown RBP15.65■□□□□ 0.1
TCOF1-202ENST00000377797 MRPL4Q9BYD3 311 aaKnown RBP15.65■□□□□ 0.1
TCOF1-202ENST00000377797 C2orf40Q9H1Z8 148 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 TACC3Q9Y6A5 838 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 FAM86B1E9PN63 330 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 SLC16A3O15427 465 aaKnown RBP15.65■□□□□ 0.1
TCOF1-202ENST00000377797 FAM86B2P0C5J1 330 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 ACTN1P12814 892 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 ZNF667Q5HYK9 610 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 KAZNQ674X7 775 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 C7orf31Q8N865 590 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 PDCD2LQ9BRP1 358 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 MRPL47Q9HD33 250 aaKnown RBP15.65■□□□□ 0.1
TCOF1-202ENST00000377797 RBAKQ9NYW8 714 aaPredicted RBP15.65■□□□□ 0.1
TCOF1-202ENST00000377797 PPARDQ03181 441 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 GABPAQ06546 454 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 KRT71Q3SY84 523 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 GLYCTKQ8IVS8 523 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 PPP1R14CQ8TAE6 165 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 ALS2Q96Q42 1657 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 SEC31AO94979 1220 aaKnown RBP15.65■□□□□ 0.1
TCOF1-202ENST00000377797 HEXIM1O94992 359 aaKnown RBP15.65■□□□□ 0.1
TCOF1-202ENST00000377797 CCDC89Q8N998 374 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 FBXL13Q8NEE6 735 aa15.65■□□□□ 0.1
TCOF1-202ENST00000377797 NPM3O75607 178 aaKnown RBP15.64■□□□□ 0.09
TCOF1-202ENST00000377797 KLK7P49862 253 aa15.64■□□□□ 0.09
TCOF1-202ENST00000377797 ZNF746Q6NUN9 644 aaPredicted RBP15.64■□□□□ 0.09
TCOF1-202ENST00000377797 PNMA8AQ86V59 439 aaPredicted RBP15.64■□□□□ 0.09
TCOF1-202ENST00000377797 RHOT2Q8IXI1 618 aa15.64■□□□□ 0.09
TCOF1-202ENST00000377797 CCL15-CCL14A0A0B4J2E2 113 aa15.64■□□□□ 0.09
TCOF1-202ENST00000377797 MYL3P08590 195 aa15.64■□□□□ 0.09
TCOF1-202ENST00000377797 SLC9A1P19634 815 aa15.64■□□□□ 0.09
TCOF1-202ENST00000377797 PPFIA1Q13136 1202 aa15.64■□□□□ 0.09
TCOF1-202ENST00000377797 MTMR3Q13615 1198 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms