RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 KCTD16Q68DU8 428 aa11.62□□□□□ -0.55
ABCF1-202ENST00000376545 TADA2BQ86TJ2 420 aa11.62□□□□□ -0.55
ABCF1-202ENST00000376545 SPATS2Q86XZ4 545 aaKnown RBP11.62□□□□□ -0.55
ABCF1-202ENST00000376545 KIAA0825Q8IV33 1275 aa11.62□□□□□ -0.55
ABCF1-202ENST00000376545 NLGN1Q8N2Q7 840 aa11.62□□□□□ -0.55
ABCF1-202ENST00000376545 DBNDD1Q9H9R9 158 aa11.62□□□□□ -0.55
ABCF1-202ENST00000376545 PARVGQ9HBI0 331 aa11.62□□□□□ -0.55
ABCF1-202ENST00000376545 ODF2LQ9ULJ1 636 aa11.62□□□□□ -0.55
ABCF1-202ENST00000376545 PCDHB13Q9Y5F0 798 aa11.62□□□□□ -0.55
ABCF1-202ENST00000376545 GDF11O95390 407 aa11.61□□□□□ -0.55
ABCF1-202ENST00000376545 MYCNP04198 464 aaPredicted RBP11.61□□□□□ -0.55
ABCF1-202ENST00000376545 TAL1P17542 331 aaPredicted RBP11.61□□□□□ -0.55
ABCF1-202ENST00000376545 HMGB2P26583 209 aaKnown RBP11.61□□□□□ -0.55
ABCF1-202ENST00000376545 FMNL3Q8IVF7 1028 aa11.61□□□□□ -0.55
ABCF1-202ENST00000376545 CNPY4Q8N129 248 aa11.61□□□□□ -0.55
ABCF1-202ENST00000376545 LMO3Q8TAP4 145 aa11.61□□□□□ -0.55
ABCF1-202ENST00000376545 LRRC45Q96CN5 670 aa11.61□□□□□ -0.55
ABCF1-202ENST00000376545 DYDC2Q96IM9 177 aa11.61□□□□□ -0.55
ABCF1-202ENST00000376545 TXLNGYQ9BZA5 131 aa11.61□□□□□ -0.55
ABCF1-202ENST00000376545 EFCC1Q9HA90 598 aa11.61□□□□□ -0.55
ABCF1-202ENST00000376545 GGA2Q9UJY4 613 aa11.61□□□□□ -0.55
ABCF1-202ENST00000376545 SFI1A8K8P3 1242 aa11.61□□□□□ -0.55
ABCF1-202ENST00000376545 RAD21O60216 631 aa11.61□□□□□ -0.55
ABCF1-202ENST00000376545 MDH1P40925 334 aaKnown RBP11.61□□□□□ -0.55
ABCF1-202ENST00000376545 TRAF1Q13077 416 aa11.61□□□□□ -0.55
ABCF1-202ENST00000376545 CTTNQ14247 550 aaKnown RBP11.61□□□□□ -0.55
ABCF1-202ENST00000376545 KIF22Q14807 665 aa11.61□□□□□ -0.55
ABCF1-202ENST00000376545 ZC2HC1CQ53FD0 456 aaPredicted RBP11.61□□□□□ -0.55
ABCF1-202ENST00000376545 TCERG1LQ5VWI1 586 aa11.61□□□□□ -0.55
ABCF1-202ENST00000376545 PIGOQ8TEQ8 1089 aa11.61□□□□□ -0.55
ABCF1-202ENST00000376545 RFFLQ8WZ73 363 aa11.61□□□□□ -0.55
ABCF1-202ENST00000376545 DEFB129Q9H1M3 183 aa11.61□□□□□ -0.55
ABCF1-202ENST00000376545 IKZF4Q9H2S9 585 aa11.61□□□□□ -0.55
ABCF1-202ENST00000376545 FAM13AO94988 1023 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 PRELPP51888 382 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 PLS1Q14651 629 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 COG2Q14746 738 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 PTGISQ16647 500 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 CBWD6Q4V339 395 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 CBWD3Q5JTY5 395 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 CBWD5Q5RIA9 395 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 DCAF12L1Q5VU92 463 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 SLC35G2Q8TBE7 412 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 U2AF1L4Q8WU68 220 aaKnown RBP11.6□□□□□ -0.55
ABCF1-202ENST00000376545 AP1M1Q9BXS5 423 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 AGPAT3Q9NRZ7 376 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 WRAP73Q9P2S5 460 aaPredicted RBP11.6□□□□□ -0.55
ABCF1-202ENST00000376545 KCNG1Q9UIX4 513 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 DNAJC12Q9UKB3 198 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 ANKRD65E5RJM6 399 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 KRIT1O00522 736 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 PLA2G6O60733 806 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 GH2P01242 217 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 VIL1P09327 827 aaKnown RBP11.6□□□□□ -0.55
ABCF1-202ENST00000376545 ITGA4P13612 1032 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 RFX1P22670 979 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 GUCY2CP25092 1073 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 ZNF844Q08AG5 666 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 DRAP1Q14919 205 aaPredicted RBP11.6□□□□□ -0.55
ABCF1-202ENST00000376545 KIAA1755Q5JYT7 1200 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 RBM26Q5T8P6 1007 aaKnown RBP11.6□□□□□ -0.55
ABCF1-202ENST00000376545 LRCH2Q5VUJ6 765 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 TTC19Q6DKK2 380 aaPredicted RBP11.6□□□□□ -0.55
ABCF1-202ENST00000376545 B4GALNT4Q76KP1 1039 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 YTHDF3Q7Z739 585 aaKnown RBP11.6□□□□□ -0.55
ABCF1-202ENST00000376545 DAAM2Q86T65 1068 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 MYCT1Q8N699 235 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 DDX47Q9H0S4 455 aaKnown RBP11.6□□□□□ -0.55
ABCF1-202ENST00000376545 RANBP17Q9H2T7 1088 aaKnown RBP11.6□□□□□ -0.55
ABCF1-202ENST00000376545 APEX2Q9UBZ4 518 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 AMFRQ9UKV5 643 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 AFF2P51816 1311 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 ZBTB39O15060 712 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 PPP1R12BO60237 982 aaPredicted RBP11.6□□□□□ -0.55
ABCF1-202ENST00000376545 ECE2O60344 883 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 BUB1BO60566 1050 aaPredicted RBP11.6□□□□□ -0.55
ABCF1-202ENST00000376545 CHRM1P11229 460 aaPredicted RBP11.6□□□□□ -0.55
ABCF1-202ENST00000376545 BIRC3Q13489 604 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 AGBL2Q5U5Z8 902 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 MAATS1Q7Z4T9 603 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 NACC1Q96RE7 527 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 CARD9Q9H257 536 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 POLD4Q9HCU8 107 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 OSGEPQ9NPF4 335 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 SLC12A6Q9UHW9 1150 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 USP20Q9Y2K6 914 aa11.6□□□□□ -0.55
ABCF1-202ENST00000376545 IGSF9BQ9UPX0 1349 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 UBAP1LF5GYI3 381 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 G3V3G9 751 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 ZNF76P36508 570 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 FLT3P36888 993 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 ATP1A2P50993 1020 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 STAT2P52630 851 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 PTENP60484 403 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 GUCY1A3Q02108 690 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 MAPK7Q13164 816 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 MTMR3Q13615 1198 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 TTC31Q49AM3 519 aaPredicted RBP11.59□□□□□ -0.55
ABCF1-202ENST00000376545 CEP85LQ5SZL2 805 aa11.59□□□□□ -0.55
ABCF1-202ENST00000376545 DCAF8Q5TAQ9 597 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms