RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 OATP04181 439 aa13.81□□□□□ -0.2
CLCN6-206ENST00000376496 EPB41P11171 864 aaKnown RBP13.81□□□□□ -0.2
CLCN6-206ENST00000376496 RPL13P26373 211 aaKnown RBP13.81□□□□□ -0.2
CLCN6-206ENST00000376496 KCNJ6P48051 423 aa13.81□□□□□ -0.2
CLCN6-206ENST00000376496 MARSP56192 900 aaKnown RBP13.81□□□□□ -0.2
CLCN6-206ENST00000376496 ENOX2Q16206 610 aaKnown RBP13.81□□□□□ -0.2
CLCN6-206ENST00000376496 ARMCX2Q7L311 632 aa13.81□□□□□ -0.2
CLCN6-206ENST00000376496 CCDC51Q96ER9 411 aa13.81□□□□□ -0.2
CLCN6-206ENST00000376496 POLR3FQ9H1D9 316 aaPredicted RBP13.81□□□□□ -0.2
CLCN6-206ENST00000376496 MAFBQ9Y5Q3 323 aaPredicted RBP13.81□□□□□ -0.2
CLCN6-206ENST00000376496 ARID2Q68CP9 1835 aa13.81□□□□□ -0.2
CLCN6-206ENST00000376496 DENND3A2RUS2 1198 aa13.81□□□□□ -0.2
CLCN6-206ENST00000376496 LRRC53A6NM62 1247 aa13.81□□□□□ -0.2
CLCN6-206ENST00000376496 ANKRD63C9JTQ0 380 aa13.81□□□□□ -0.2
CLCN6-206ENST00000376496 RIOK3O14730 519 aaKnown RBP13.81□□□□□ -0.2
CLCN6-206ENST00000376496 EXOC3O60645 756 aa13.81□□□□□ -0.2
CLCN6-206ENST00000376496 TXNP10599 105 aaKnown RBP13.81□□□□□ -0.2
CLCN6-206ENST00000376496 XRCC5P13010 732 aaKnown RBP13.81□□□□□ -0.2
CLCN6-206ENST00000376496 ZNF157P51786 506 aaPredicted RBP13.81□□□□□ -0.2
CLCN6-206ENST00000376496 POLR2FP61218 127 aaKnown RBP13.81□□□□□ -0.2
CLCN6-206ENST00000376496 XKR3Q5GH77 459 aa13.81□□□□□ -0.2
CLCN6-206ENST00000376496 CYP26C1Q6V0L0 522 aa13.81□□□□□ -0.2
CLCN6-206ENST00000376496 NEK11Q8NG66 645 aa13.81□□□□□ -0.2
CLCN6-206ENST00000376496 SLC35C1Q96A29 364 aa13.81□□□□□ -0.2
CLCN6-206ENST00000376496 KCND1Q9NSA2 647 aa13.81□□□□□ -0.2
CLCN6-206ENST00000376496 STAT5BP51692 787 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 POLGP54098 1239 aaPredicted RBP13.8□□□□□ -0.2
CLCN6-206ENST00000376496 FKBP1BP68106 108 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 ZBED6P86452 979 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 GRM1Q13255 1194 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 DRP2Q13474 957 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 NEDD9Q14511 834 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 GJB7Q6PEY0 223 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 STXBP4Q6ZWJ1 553 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 FRMD5Q7Z6J6 570 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 ANKRD23Q86SG2 305 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 TMEM161BQ8NDZ6 487 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 GLG1Q92896 1179 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 ZNF668Q96K58 619 aaPredicted RBP13.8□□□□□ -0.2
CLCN6-206ENST00000376496 FAM84AQ96KN4 292 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 KMT5AQ9NQR1 393 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 TRIM10Q9UDY6 481 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 DNAI1Q9UI46 699 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 IGF2BP3O00425 579 aaKnown RBP eCLIP13.8□□□□□ -0.2
CLCN6-206ENST00000376496 FECHP22830 423 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 DLG4P78352 724 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 ARID5AQ03989 594 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 DMP1Q13316 513 aaPredicted RBP13.8□□□□□ -0.2
CLCN6-206ENST00000376496 EMC2Q15006 297 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 TRIM65Q6PJ69 517 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 METTL7BQ6UX53 244 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 TMTC1Q8IUR5 882 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 TRAPPC12Q8WVT3 735 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 SAAL1Q96ER3 474 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 BORCS6Q96GS4 357 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 SPATA33Q96N06 139 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 NUP58Q9BVL2 599 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.8□□□□□ -0.22e-7■■■■■ 93.2
CLCN6-206ENST00000376496 PDLIM7Q9NR12 457 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 REXO2Q9Y3B8 237 aaKnown RBP13.8□□□□□ -0.2
CLCN6-206ENST00000376496 NOP56O00567 594 aaKnown RBP13.8□□□□□ -0.2
CLCN6-206ENST00000376496 AFPP02771 609 aaKnown RBP13.8□□□□□ -0.2
CLCN6-206ENST00000376496 CCDC175P0C221 793 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 TSR1Q2NL82 804 aaKnown RBP13.8□□□□□ -0.2
CLCN6-206ENST00000376496 CACNA2D4Q7Z3S7 1137 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 DHX37Q8IY37 1157 aaKnown RBP13.8□□□□□ -0.2
CLCN6-206ENST00000376496 ASAP3Q8TDY4 903 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 BAP1Q92560 729 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 ACCSQ96QU6 501 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 GPR20Q99678 358 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 NAA15Q9BXJ9 866 aaKnown RBP13.8□□□□□ -0.2
CLCN6-206ENST00000376496 ATP6V0A4Q9HBG4 840 aa13.8□□□□□ -0.2
CLCN6-206ENST00000376496 UQCRHLA0A096LP55 91 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 ZSCAN12O43309 604 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 LRRN2O75325 713 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 DGAT1O75907 488 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 UQCRHP07919 91 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 PSMC2P35998 433 aaKnown RBP13.79□□□□□ -0.2
CLCN6-206ENST00000376496 NCKAP1LP55160 1127 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 CCNA1P78396 465 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 GTF2BQ00403 316 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 CYP27A1Q02318 531 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 CELF3Q5SZQ8 465 aaKnown RBP13.79□□□□□ -0.2
CLCN6-206ENST00000376496 GPR142Q7Z601 462 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 SHCBP1Q8NEM2 672 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 SEPT1Q8WYJ6 367 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 WDR24Q96S15 920 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 MAF1Q9H063 256 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 DMAC2Q9NW81 257 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 AJAP1Q9UKB5 411 aaPredicted RBP13.79□□□□□ -0.2
CLCN6-206ENST00000376496 TBX20Q9UMR3 447 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 EPN1Q9Y6I3 576 aaPredicted RBP13.79□□□□□ -0.2
CLCN6-206ENST00000376496 IVNS1ABPQ9Y6Y0 642 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 PLXNB2O15031 1838 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 DOCK3Q8IZD9 2030 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 IGKV6D-21A0A0A0MT36 114 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 FAM170AA1A519 330 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 COPB2P35606 906 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 ZNF792Q3KQV3 632 aa13.79□□□□□ -0.2
CLCN6-206ENST00000376496 CHADLQ6NUI6 762 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms