RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 NLRP4Q96MN2 994 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.78□□□□□ -0.52
MDC1-201ENST00000376406 TUBB6Q9BUF5 446 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 Q9H521 79 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 RNF146Q9NTX7 359 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 NFU1Q9UMS0 254 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 ADGRB1O14514 1584 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 CPP00450 1065 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 GFPT1Q06210 699 aaPredicted RBP11.78□□□□□ -0.52
MDC1-201ENST00000376406 SPP2Q13103 211 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 XRRA1Q6P2D8 792 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 DSTYKQ6XUX3 929 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 RPUSD2Q8IZ73 545 aaKnown RBP11.78□□□□□ -0.52
MDC1-201ENST00000376406 OTUD5Q96G74 571 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 GCOM2Q9BZD3 368 aaPredicted RBP11.78□□□□□ -0.52
MDC1-201ENST00000376406 TXNDC9O14530 226 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 CASP1P29466 404 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 STAT3P40763 770 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 SNAP25P60880 206 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 TFAMQ00059 246 aaKnown RBP11.78□□□□□ -0.52
MDC1-201ENST00000376406 SLC15A2Q16348 729 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 ANKRD13AQ8IZ07 590 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 MICAL1Q8TDZ2 1067 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 MAFGO15525 162 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 ZWINTO95229 277 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 KNOP1Q1ED39 458 aaKnown RBP11.78□□□□□ -0.52
MDC1-201ENST00000376406 NAALADL2Q58DX5 795 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 CC2D1AQ6P1N0 951 aaPredicted RBP11.78□□□□□ -0.52
MDC1-201ENST00000376406 ADGRF4Q8IZF3 695 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 MTRQ99707 1265 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 ADAMTS13Q76LX8 1427 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 NBPF26B4DH59 902 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 ZNF157P51786 506 aaPredicted RBP11.78□□□□□ -0.52
MDC1-201ENST00000376406 AP3M2P53677 418 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 PPP2R5CQ13362 524 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 NBPF10Q6P3W6 841 aaKnown RBP11.78□□□□□ -0.52
MDC1-201ENST00000376406 NBPF15Q8N660 670 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 TEX13BQ9BXU2 312 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 SLC38A10Q9HBR0 1119 aa11.78□□□□□ -0.52
MDC1-201ENST00000376406 MIF4GDA9UHW6 222 aaKnown RBP11.77□□□□□ -0.52
MDC1-201ENST00000376406 TRAPPC3O43617 180 aa11.77□□□□□ -0.52
MDC1-201ENST00000376406 CTNND1O60716 968 aaKnown RBP11.77□□□□□ -0.52
MDC1-201ENST00000376406 EIF2AK2P19525 551 aaKnown RBP11.77□□□□□ -0.52
MDC1-201ENST00000376406 KCNJ6P48051 423 aa11.77□□□□□ -0.52
MDC1-201ENST00000376406 SIX6OS1Q8N1H7 587 aa11.77□□□□□ -0.52
MDC1-201ENST00000376406 ADAMTS1Q9UHI8 967 aa11.77□□□□□ -0.52
MDC1-201ENST00000376406 DNAJC12Q9UKB3 198 aa11.77□□□□□ -0.52
MDC1-201ENST00000376406 RASGRF2O14827 1237 aa11.77□□□□□ -0.52
MDC1-201ENST00000376406 KIAA0391O15091 583 aaKnown RBP11.77□□□□□ -0.52
MDC1-201ENST00000376406 TXLNGQ9NUQ3 528 aa11.77□□□□□ -0.52
MDC1-201ENST00000376406 PLAAQ9Y263 795 aa11.77□□□□□ -0.52
MDC1-201ENST00000376406 FGGP02679 453 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 SEPT6Q14141 434 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 RPS6KA2Q15349 733 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 PRR5LQ6MZQ0 368 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 DARS2Q6PI48 645 aaKnown RBP11.77□□□□□ -0.53
MDC1-201ENST00000376406 TEX2Q8IWB9 1127 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 TBC1D16Q8TBP0 767 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 CELF1Q92879 486 aaKnown RBP11.77□□□□□ -0.53
MDC1-201ENST00000376406 DDX50Q9BQ39 737 aaKnown RBP11.77□□□□□ -0.53
MDC1-201ENST00000376406 USP27XA6NNY8 438 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 CLDN3O15551 220 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 SH3BGRP55822 239 aaPredicted RBP11.77□□□□□ -0.53
MDC1-201ENST00000376406 ARHGAP4P98171 946 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 ITKQ08881 620 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 SFR1Q86XK3 245 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 MICALL2Q8IY33 904 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 OSBPL9Q96SU4 736 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 MSTO1Q9BUK6 570 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 PHF20Q9BVI0 1012 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 ANKRD26Q9UPS8 1709 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 A0A087WUV0 522 aaPredicted RBP11.77□□□□□ -0.53
MDC1-201ENST00000376406 TJP3O95049 919 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 SKIP12755 728 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 IFNAR2P48551 515 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 KCNH2Q12809 1159 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 NKX1-1Q15270 411 aaPredicted RBP11.77□□□□□ -0.53
MDC1-201ENST00000376406 TAF1CQ15572 869 aaPredicted RBP11.77□□□□□ -0.53
MDC1-201ENST00000376406 METTL16Q86W50 562 aaKnown RBP11.77□□□□□ -0.53
MDC1-201ENST00000376406 ZNF34Q8IZ26 560 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 ZNF302Q9NR11 478 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 CAPN11Q9UMQ6 739 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 SLIT1O75093 1534 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 TWF2Q6IBS0 349 aaKnown RBP11.77□□□□□ -0.53
MDC1-201ENST00000376406 GBP5Q96PP8 586 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 TACO1Q9BSH4 297 aaKnown RBP11.77□□□□□ -0.53
MDC1-201ENST00000376406 ADGRG1Q9Y653 693 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 UBR1Q8IWV7 1749 aa11.77□□□□□ -0.53
MDC1-201ENST00000376406 SRGAP2CP0DJJ0 459 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 ARL4AP40617 200 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 E2F5Q15329 346 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 Q3C1V9 767 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 MIPOL1Q8TD10 442 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 PIGOQ8TEQ8 1089 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 MRPL4Q9BYD3 311 aaKnown RBP11.76□□□□□ -0.53
MDC1-201ENST00000376406 TMEM260Q9NX78 707 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 NOVA2Q9UNW9 492 aaKnown RBP11.76□□□□□ -0.53
MDC1-201ENST00000376406 ITIH6Q6UXX5 1313 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 SRGAP2O75044 1071 aa11.76□□□□□ -0.53
MDC1-201ENST00000376406 ZBTB33Q86T24 672 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms