RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 ZNF658Q5TYW1 1059 aaPredicted RBP25.37■■□□□ 1.65
HLA-C-202ENST00000376237 EFCAB12Q6NXP0 572 aa25.37■■□□□ 1.65
HLA-C-202ENST00000376237 MYCT1Q8N699 235 aa25.37■■□□□ 1.65
HLA-C-202ENST00000376237 TFRCP02786 760 aaKnown RBP25.36■■□□□ 1.65
HLA-C-202ENST00000376237 PLS3P13797 630 aa25.36■■□□□ 1.65
HLA-C-202ENST00000376237 ARL2P36404 184 aa25.36■■□□□ 1.65
HLA-C-202ENST00000376237 GJA8P48165 433 aa25.36■■□□□ 1.65
HLA-C-202ENST00000376237 ITGA7Q13683 1181 aa25.36■■□□□ 1.65
HLA-C-202ENST00000376237 FAM26FQ5R3K3 315 aa25.36■■□□□ 1.65
HLA-C-202ENST00000376237 SLC17A8Q8NDX2 589 aa25.36■■□□□ 1.65
HLA-C-202ENST00000376237 SUGCTQ9HAC7 445 aa25.36■■□□□ 1.65
HLA-C-202ENST00000376237 GPRC5CQ9NQ84 441 aa25.36■■□□□ 1.65
HLA-C-202ENST00000376237 GTF2IRD1Q9UHL9 959 aa25.36■■□□□ 1.65
HLA-C-202ENST00000376237 ARID2Q68CP9 1835 aa25.36■■□□□ 1.65
HLA-C-202ENST00000376237 A0A1W2PQ45 241 aaPredicted RBP25.35■■□□□ 1.65
HLA-C-202ENST00000376237 A0A1W2PQY0 241 aa25.35■■□□□ 1.65
HLA-C-202ENST00000376237 SFI1A8K8P3 1242 aa25.35■■□□□ 1.65
HLA-C-202ENST00000376237 MAPTP10636 758 aaKnown RBP25.35■■□□□ 1.65
HLA-C-202ENST00000376237 TYRO3Q06418 890 aa25.35■■□□□ 1.65
HLA-C-202ENST00000376237 MXD4Q14582 209 aaPredicted RBP25.35■■□□□ 1.65
HLA-C-202ENST00000376237 PPP2R5AQ15172 486 aa25.35■■□□□ 1.65
HLA-C-202ENST00000376237 STX1AQ16623 288 aa25.35■■□□□ 1.65
HLA-C-202ENST00000376237 ODR4Q5SWX8 454 aa25.35■■□□□ 1.65
HLA-C-202ENST00000376237 LRSAM1Q6UWE0 723 aa25.35■■□□□ 1.65
HLA-C-202ENST00000376237 METTL13Q8N6R0 699 aa25.35■■□□□ 1.65
HLA-C-202ENST00000376237 PSPC1Q8WXF1 523 aaKnown RBP25.35■■□□□ 1.65
HLA-C-202ENST00000376237 IFT74Q96LB3 600 aa25.35■■□□□ 1.65
HLA-C-202ENST00000376237 FUCA2Q9BTY2 467 aa25.35■■□□□ 1.65
HLA-C-202ENST00000376237 TMEM106CQ9BVX2 250 aa25.35■■□□□ 1.65
HLA-C-202ENST00000376237 POLR3FQ9H1D9 316 aaPredicted RBP25.35■■□□□ 1.65
HLA-C-202ENST00000376237 STARD7Q9NQZ5 370 aa25.35■■□□□ 1.65
HLA-C-202ENST00000376237 PCDHA2Q9Y5H9 948 aa25.35■■□□□ 1.65
HLA-C-202ENST00000376237 SCN10AQ9Y5Y9 1956 aa25.35■■□□□ 1.65
HLA-C-202ENST00000376237 FRMPD3Q5JV73 1810 aa25.34■■□□□ 1.65
HLA-C-202ENST00000376237 ASAP2O43150 1006 aa25.34■■□□□ 1.65
HLA-C-202ENST00000376237 PPP1R2P41236 205 aa25.34■■□□□ 1.65
HLA-C-202ENST00000376237 ISM2Q6H9L7 571 aa25.34■■□□□ 1.65
HLA-C-202ENST00000376237 SFR1Q86XK3 245 aa25.34■■□□□ 1.65
HLA-C-202ENST00000376237 LINC01465Q8N7H1 131 aa25.34■■□□□ 1.65
HLA-C-202ENST00000376237 ANKLE1Q8NAG6 615 aa25.34■■□□□ 1.65
HLA-C-202ENST00000376237 MLKLQ8NB16 471 aa25.34■■□□□ 1.65
HLA-C-202ENST00000376237 TMEM143Q96AN5 459 aa25.34■■□□□ 1.65
HLA-C-202ENST00000376237 NTPCRQ9BSD7 190 aaKnown RBP25.34■■□□□ 1.65
HLA-C-202ENST00000376237 POLD4Q9HCU8 107 aa25.34■■□□□ 1.65
HLA-C-202ENST00000376237 SMIM35A0A1B0GVV1 85 aa25.33■■□□□ 1.65
HLA-C-202ENST00000376237 SMTNP53814 917 aa25.33■■□□□ 1.65
HLA-C-202ENST00000376237 DMP1Q13316 513 aaPredicted RBP25.33■■□□□ 1.65
HLA-C-202ENST00000376237 FAM47CQ5HY64 1035 aa25.33■■□□□ 1.65
HLA-C-202ENST00000376237 FAM178BQ8IXR5 827 aa25.33■■□□□ 1.65
HLA-C-202ENST00000376237 SPIRE2Q8WWL2 714 aa25.33■■□□□ 1.65
HLA-C-202ENST00000376237 DACH1Q9UI36 760 aa25.33■■□□□ 1.65
HLA-C-202ENST00000376237 GRIN2DO15399 1336 aa25.33■■□□□ 1.64
HLA-C-202ENST00000376237 A0A0U1RQG5 324 aaPredicted RBP25.32■■□□□ 1.64
HLA-C-202ENST00000376237 BMP6P22004 513 aa25.32■■□□□ 1.64
HLA-C-202ENST00000376237 SCP2P22307 547 aa25.32■■□□□ 1.64
HLA-C-202ENST00000376237 STK4Q13043 487 aa25.32■■□□□ 1.64
HLA-C-202ENST00000376237 MKRN4PQ13434 485 aaPredicted RBP25.32■■□□□ 1.64
HLA-C-202ENST00000376237 COBLL1Q53SF7 1204 aa25.32■■□□□ 1.64
HLA-C-202ENST00000376237 CT47A1Q5JQC4 288 aaPredicted RBP25.32■■□□□ 1.64
HLA-C-202ENST00000376237 LRRC71Q8N4P6 559 aa25.32■■□□□ 1.64
HLA-C-202ENST00000376237 MAP7D2Q96T17 732 aa25.32■■□□□ 1.64
HLA-C-202ENST00000376237 MRPL44Q9H9J2 332 aaKnown RBP25.32■■□□□ 1.64
HLA-C-202ENST00000376237 SUCLA2Q9P2R7 463 aaPredicted RBP25.32■■□□□ 1.64
HLA-C-202ENST00000376237 CENPFP49454 3210 aa25.32■■□□□ 1.64
HLA-C-202ENST00000376237 KIF20AO95235 890 aa25.32■■□□□ 1.64
HLA-C-202ENST00000376237 RPLP2P05387 115 aaKnown RBP25.32■■□□□ 1.64
HLA-C-202ENST00000376237 ABCD1P33897 745 aa25.32■■□□□ 1.64
HLA-C-202ENST00000376237 NAMPTP43490 491 aa25.32■■□□□ 1.64
HLA-C-202ENST00000376237 PEX3P56589 373 aa25.32■■□□□ 1.64
HLA-C-202ENST00000376237 SOX10P56693 466 aa25.32■■□□□ 1.64
HLA-C-202ENST00000376237 CDC42EP1Q00587 391 aa25.32■■□□□ 1.64
HLA-C-202ENST00000376237 TAF2Q6P1X5 1199 aa25.32■■□□□ 1.64
HLA-C-202ENST00000376237 STXBP4Q6ZWJ1 553 aa25.32■■□□□ 1.64
HLA-C-202ENST00000376237 SLC43A3Q8NBI5 491 aa25.32■■□□□ 1.64
HLA-C-202ENST00000376237 PRPF31Q8WWY3 499 aaKnown RBP25.32■■□□□ 1.64
HLA-C-202ENST00000376237 SLC39A2Q9NP94 309 aa25.32■■□□□ 1.64
HLA-C-202ENST00000376237 H0YCG3 227 aa25.31■■□□□ 1.64
HLA-C-202ENST00000376237 TREHO43280 583 aa25.31■■□□□ 1.64
HLA-C-202ENST00000376237 CAVIN2O95810 425 aa25.31■■□□□ 1.64
HLA-C-202ENST00000376237 CYP2C9P11712 490 aa25.31■■□□□ 1.64
HLA-C-202ENST00000376237 GLRA2P23416 452 aa25.31■■□□□ 1.64
HLA-C-202ENST00000376237 CLCN3P51790 818 aa25.31■■□□□ 1.64
HLA-C-202ENST00000376237 STIM1Q13586 685 aa25.31■■□□□ 1.64
HLA-C-202ENST00000376237 ALCAMQ13740 583 aa25.31■■□□□ 1.64
HLA-C-202ENST00000376237 ZNF710Q8N1W2 664 aa25.31■■□□□ 1.64
HLA-C-202ENST00000376237 ST6GALNAC4Q9H4F1 302 aa25.31■■□□□ 1.64
HLA-C-202ENST00000376237 NPTX2P47972 431 aa25.3■■□□□ 1.64
HLA-C-202ENST00000376237 DRP2Q13474 957 aa25.3■■□□□ 1.64
HLA-C-202ENST00000376237 TFDP1Q14186 410 aa25.3■■□□□ 1.64
HLA-C-202ENST00000376237 HIC1Q14526 733 aa25.3■■□□□ 1.64
HLA-C-202ENST00000376237 DPCR1Q3MIW9 517 aa25.3■■□□□ 1.64
HLA-C-202ENST00000376237 GDF6Q6KF10 455 aaPredicted RBP25.3■■□□□ 1.64
HLA-C-202ENST00000376237 ZNF720Q7Z2F6 126 aa25.3■■□□□ 1.64
HLA-C-202ENST00000376237 NME8Q8N427 588 aa25.3■■□□□ 1.64
HLA-C-202ENST00000376237 KIAA0895Q8NCT3 520 aa25.3■■□□□ 1.64
HLA-C-202ENST00000376237 HPS3Q969F9 1004 aa25.3■■□□□ 1.64
HLA-C-202ENST00000376237 FIZ1Q96SL8 496 aa25.3■■□□□ 1.64
HLA-C-202ENST00000376237 KMT5AQ9NQR1 393 aa25.3■■□□□ 1.64
HLA-C-202ENST00000376237 GDAQ9Y2T3 454 aa25.3■■□□□ 1.64
HLA-C-202ENST00000376237 PCDHB13Q9Y5F0 798 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms