RNA–Protein interactions for RNA: ENST00000376177.6

DDX39B-201, Transcript of DExD-box helicase 39B, humanhuman

TSL 5 BASIC

Gene DDX39B, Length 1,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-201ENST00000376177 TMEM173Q86WV6 379 aaPredicted RBP12.47□□□□□ -0.41
DDX39B-201ENST00000376177 RUBCNQ92622 972 aa12.47□□□□□ -0.41
DDX39B-201ENST00000376177 SYAP1Q96A49 352 aaPredicted RBP12.47□□□□□ -0.41
DDX39B-201ENST00000376177 INTS4Q96HW7 963 aaKnown RBP12.47□□□□□ -0.41
DDX39B-201ENST00000376177 SMARCAD1Q9H4L7 1026 aa12.47□□□□□ -0.41
DDX39B-201ENST00000376177 RIOX1Q9H6W3 641 aa12.47□□□□□ -0.41
DDX39B-201ENST00000376177 ATP6V0A4Q9HBG4 840 aa12.47□□□□□ -0.41
DDX39B-201ENST00000376177 WDR81Q562E7 1941 aa12.46□□□□□ -0.41
DDX39B-201ENST00000376177 MEIS2O14770 477 aa12.46□□□□□ -0.42
DDX39B-201ENST00000376177 RPS6KA5O75582 802 aa12.46□□□□□ -0.42
DDX39B-201ENST00000376177 ATXN1P54253 815 aaKnown RBP12.46□□□□□ -0.42
DDX39B-201ENST00000376177 FAM189BP81408 668 aa12.46□□□□□ -0.42
DDX39B-201ENST00000376177 IFIT1BQ5T764 474 aaKnown RBP12.46□□□□□ -0.42
DDX39B-201ENST00000376177 FAM228AQ86W67 206 aa12.46□□□□□ -0.42
DDX39B-201ENST00000376177 SLC39A11Q8N1S5 342 aa12.46□□□□□ -0.42
DDX39B-201ENST00000376177 PLCD3Q8N3E9 789 aa12.46□□□□□ -0.42
DDX39B-201ENST00000376177 SUMF1Q8NBK3 374 aa12.46□□□□□ -0.42
DDX39B-201ENST00000376177 ST13P5Q8NFI4 369 aaPredicted RBP12.46□□□□□ -0.42
DDX39B-201ENST00000376177 SLC22A17Q8WUG5 538 aa12.46□□□□□ -0.42
DDX39B-201ENST00000376177 ZNF558Q96NG5 402 aa12.46□□□□□ -0.42
DDX39B-201ENST00000376177 MAP7D2Q96T17 732 aa12.46□□□□□ -0.42
DDX39B-201ENST00000376177 SEMA4AQ9H3S1 761 aa12.46□□□□□ -0.42
DDX39B-201ENST00000376177 TMEM161AQ9NX61 479 aa12.46□□□□□ -0.42
DDX39B-201ENST00000376177 USTQ9Y2C2 406 aa12.46□□□□□ -0.42
DDX39B-201ENST00000376177 RRN3P2A6NIE6 340 aa12.45□□□□□ -0.42
DDX39B-201ENST00000376177 LRRN2O75325 713 aa12.45□□□□□ -0.42
DDX39B-201ENST00000376177 CXCL14O95715 111 aa12.45□□□□□ -0.42
DDX39B-201ENST00000376177 METAP2P50579 478 aaKnown RBP eCLIP12.45□□□□□ -0.42
DDX39B-201ENST00000376177 DSC3Q14574 896 aa12.45□□□□□ -0.42
DDX39B-201ENST00000376177 CLLU1OSQ5K130 101 aa12.45□□□□□ -0.42
DDX39B-201ENST00000376177 ATAT1Q5SQI0 421 aa12.45□□□□□ -0.42
DDX39B-201ENST00000376177 OSMRQ99650 979 aa12.45□□□□□ -0.42
DDX39B-201ENST00000376177 TBC1D17Q9HA65 648 aa12.45□□□□□ -0.42
DDX39B-201ENST00000376177 C1orf112Q9NSG2 853 aa12.45□□□□□ -0.42
DDX39B-201ENST00000376177 SPG21Q9NZD8 308 aa12.45□□□□□ -0.42
DDX39B-201ENST00000376177 DLGAP2Q9P1A6 1054 aa12.45□□□□□ -0.42
DDX39B-201ENST00000376177 MYH15Q9Y2K3 1946 aa12.44□□□□□ -0.42
DDX39B-201ENST00000376177 PNMA6FA0A0J9YX94 578 aa12.44□□□□□ -0.42
DDX39B-201ENST00000376177 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.44□□□□□ -0.42
DDX39B-201ENST00000376177 SMIM35A0A1B0GVV1 85 aa12.44□□□□□ -0.42
DDX39B-201ENST00000376177 DCDC2BA2VCK2 349 aa12.44□□□□□ -0.42
DDX39B-201ENST00000376177 GLULP15104 373 aa12.44□□□□□ -0.42
DDX39B-201ENST00000376177 KLRC1P26715 233 aa12.44□□□□□ -0.42
DDX39B-201ENST00000376177 HSP90AA2PQ14568 343 aaPredicted RBP12.44□□□□□ -0.42
DDX39B-201ENST00000376177 GRM4Q14833 912 aa12.44□□□□□ -0.42
DDX39B-201ENST00000376177 CCDC178Q5BJE1 867 aa12.44□□□□□ -0.42
DDX39B-201ENST00000376177 XRRA1Q6P2D8 792 aa12.44□□□□□ -0.42
DDX39B-201ENST00000376177 MTERF4Q7Z6M4 381 aaKnown RBP12.44□□□□□ -0.42
DDX39B-201ENST00000376177 NLRX1Q86UT6 975 aa12.44□□□□□ -0.42
DDX39B-201ENST00000376177 GAS2L3Q86XJ1 694 aa12.44□□□□□ -0.42
DDX39B-201ENST00000376177 KIAA0319LQ8IZA0 1049 aa12.44□□□□□ -0.42
DDX39B-201ENST00000376177 MAML2Q8IZL2 1156 aaPredicted RBP12.44□□□□□ -0.42
DDX39B-201ENST00000376177 BCL7CQ8WUZ0 217 aaPredicted RBP12.44□□□□□ -0.42
DDX39B-201ENST00000376177 PDLIM2Q96JY6 352 aa12.44□□□□□ -0.42
DDX39B-201ENST00000376177 TMEM117Q9H0C3 514 aa12.44□□□□□ -0.42
DDX39B-201ENST00000376177 OFD1O75665 1012 aa12.43□□□□□ -0.42
DDX39B-201ENST00000376177 CD2BP2O95400 341 aaKnown RBP12.43□□□□□ -0.42
DDX39B-201ENST00000376177 PDE1AP54750 535 aa12.43□□□□□ -0.42
DDX39B-201ENST00000376177 KRT17Q04695 432 aa12.43□□□□□ -0.42
DDX39B-201ENST00000376177 KIZQ2M2Z5 673 aa12.43□□□□□ -0.42
DDX39B-201ENST00000376177 GIMAP8Q8ND71 665 aaPredicted RBP12.43□□□□□ -0.42
DDX39B-201ENST00000376177 SMARCC2Q8TAQ2 1214 aa12.43□□□□□ -0.42
DDX39B-201ENST00000376177 GPRASP2Q96D09 838 aa12.43□□□□□ -0.42
DDX39B-201ENST00000376177 UBAC1Q9BSL1 405 aa12.43□□□□□ -0.42
DDX39B-201ENST00000376177 ZBP1Q9H171 429 aa12.43□□□□□ -0.42
DDX39B-201ENST00000376177 LMBRD1Q9NUN5 540 aa12.43□□□□□ -0.42
DDX39B-201ENST00000376177 UBIAD1Q9Y5Z9 338 aa12.43□□□□□ -0.42
DDX39B-201ENST00000376177 DOCK6Q96HP0 2047 aa12.43□□□□□ -0.42
DDX39B-201ENST00000376177 SPEGQ15772 3267 aa12.43□□□□□ -0.42
DDX39B-201ENST00000376177 ZNF500O60304 480 aaPredicted RBP12.42□□□□□ -0.42
DDX39B-201ENST00000376177 VTNP04004 478 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 MYBP10242 640 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 PDIA4P13667 645 aaKnown RBP12.42□□□□□ -0.42
DDX39B-201ENST00000376177 SDSP20132 328 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 MTMR1Q13613 665 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 UBE2SQ16763 222 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 GPR149Q86SP6 731 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 VPS52Q8N1B4 723 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 LRRC43Q8N309 656 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 RNF169Q8NCN4 708 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 VN1R3Q9BXE9 311 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 FOXQ1Q9C009 403 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 RNF216Q9NWF9 866 aaPredicted RBP12.42□□□□□ -0.42
DDX39B-201ENST00000376177 ASPMQ8IZT6 3477 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 MYH9P35579 1960 aaKnown RBP12.42□□□□□ -0.42
DDX39B-201ENST00000376177 ZZEF1O43149 2961 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 PPM1AP35813 382 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 BCAR1P56945 870 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 ZSCAN23Q3MJ62 389 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 CCDC149Q6ZUS6 474 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 ECHDC2Q86YB7 292 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 NME8Q8N427 588 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 FAM184AQ8NB25 1140 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 HELQQ8TDG4 1101 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 GPR152Q8TDT2 470 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 RILPL2Q969X0 211 aa12.42□□□□□ -0.42
DDX39B-201ENST00000376177 ACSF2Q96CM8 615 aaPredicted RBP12.42□□□□□ -0.42
DDX39B-201ENST00000376177 ZNF668Q96K58 619 aaPredicted RBP12.42□□□□□ -0.42
DDX39B-201ENST00000376177 ELAC1Q9H777 363 aaKnown RBP12.42□□□□□ -0.42
DDX39B-201ENST00000376177 JPH1Q9HDC5 661 aaPredicted RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms