RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 TTYH3Q9C0H2 523 aa12.24□□□□□ -0.45
PDPN-202ENST00000376057 CAPN11Q9UMQ6 739 aa12.24□□□□□ -0.45
PDPN-202ENST00000376057 DAAM1Q9Y4D1 1078 aa12.24□□□□□ -0.45
PDPN-202ENST00000376057 PRPF6O94906 941 aaKnown RBP12.23□□□□□ -0.45
PDPN-202ENST00000376057 NR3C1P04150 777 aa12.23□□□□□ -0.45
PDPN-202ENST00000376057 SKILP12757 684 aa12.23□□□□□ -0.45
PDPN-202ENST00000376057 NMT1P30419 496 aaKnown RBP12.23□□□□□ -0.45
PDPN-202ENST00000376057 LY6KQ17RY6 165 aa12.23□□□□□ -0.45
PDPN-202ENST00000376057 IQSEC1Q6DN90 963 aa12.23□□□□□ -0.45
PDPN-202ENST00000376057 ZNF830Q96NB3 372 aaPredicted RBP12.23□□□□□ -0.45
PDPN-202ENST00000376057 GBP3Q9H0R5 595 aa12.23□□□□□ -0.45
PDPN-202ENST00000376057 RRAGDQ9NQL2 400 aaPredicted RBP12.23□□□□□ -0.45
PDPN-202ENST00000376057 EXOC7Q9UPT5 735 aa12.23□□□□□ -0.45
PDPN-202ENST00000376057 PHLPP2Q6ZVD8 1323 aa12.23□□□□□ -0.45
PDPN-202ENST00000376057 USO1O60763 962 aaKnown RBP12.23□□□□□ -0.45
PDPN-202ENST00000376057 MFAP3LO75121 409 aa12.23□□□□□ -0.45
PDPN-202ENST00000376057 SNAI1O95863 264 aaPredicted RBP12.23□□□□□ -0.45
PDPN-202ENST00000376057 NR2F2P24468 414 aa12.23□□□□□ -0.45
PDPN-202ENST00000376057 TCF7P36402 384 aaPredicted RBP12.23□□□□□ -0.45
PDPN-202ENST00000376057 ARL2P36404 184 aa12.23□□□□□ -0.45
PDPN-202ENST00000376057 HSP90AA2PQ14568 343 aaPredicted RBP12.23□□□□□ -0.45
PDPN-202ENST00000376057 DHX37Q8IY37 1157 aaKnown RBP12.23□□□□□ -0.45
PDPN-202ENST00000376057 PPTC7Q8NI37 304 aa12.23□□□□□ -0.45
PDPN-202ENST00000376057 ABHD16BQ9H3Z7 469 aa12.23□□□□□ -0.45
PDPN-202ENST00000376057 SMARCAD1Q9H4L7 1026 aa12.23□□□□□ -0.45
PDPN-202ENST00000376057 ZFYVE28Q9HCC9 887 aa12.23□□□□□ -0.45
PDPN-202ENST00000376057 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.23□□□□□ -0.45
PDPN-202ENST00000376057 PYCARDQ9ULZ3 195 aa12.23□□□□□ -0.45
PDPN-202ENST00000376057 IGKV6-21A0A0C4DH24 114 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 GTPBP10A4D1E9 387 aaKnown RBP12.22□□□□□ -0.45
PDPN-202ENST00000376057 TMEM88BA6NKF7 163 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 SFI1A8K8P3 1242 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 CCP110O43303 1012 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 MAFO75444 373 aaPredicted RBP12.22□□□□□ -0.45
PDPN-202ENST00000376057 ALDH1A1P00352 501 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 GH1P01241 217 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 GYPCP04921 128 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 TXNP10599 105 aaKnown RBP12.22□□□□□ -0.45
PDPN-202ENST00000376057 NPEPPSP55786 919 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 ARHGAP1Q07960 439 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 TBC1D8BQ0IIM8 1120 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 MKRN3Q13064 507 aaKnown RBP12.22□□□□□ -0.45
PDPN-202ENST00000376057 MAP2K5Q13163 448 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 DMP1Q13316 513 aaPredicted RBP12.22□□□□□ -0.45
PDPN-202ENST00000376057 UTP14CQ5TAP6 766 aaKnown RBP12.22□□□□□ -0.45
PDPN-202ENST00000376057 HS2ST1Q7LGA3 356 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 NELFCDQ8IXH7 590 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 TMEM161BQ8NDZ6 487 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 DNAJC7Q99615 494 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 JPH2Q9BR39 696 aaPredicted RBP12.22□□□□□ -0.45
PDPN-202ENST00000376057 TINF2Q9BSI4 451 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 AZI2Q9H6S1 392 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 XPNPEP1Q9NQW7 623 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 SIK3Q9Y2K2 1263 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 ARHGAP6O43182 974 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 CDK17Q00537 523 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 RBL2Q08999 1139 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 LRMPQ12912 555 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 NOLC1Q14978 699 aaKnown RBP eCLIP12.22□□□□□ -0.45
PDPN-202ENST00000376057 PPP2R5AQ15172 486 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 PLA2G4FQ68DD2 849 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 HAUS6Q7Z4H7 955 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 MAP4K3Q8IVH8 894 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 FBXO16Q8IX29 292 aaPredicted RBP12.22□□□□□ -0.45
PDPN-202ENST00000376057 ZNF526Q8TF50 670 aaPredicted RBP12.22□□□□□ -0.45
PDPN-202ENST00000376057 ATP8B4Q8TF62 1192 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 AGPAT3Q9NRZ7 376 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 SEPT9Q9UHD8 586 aaPredicted RBP12.22□□□□□ -0.45
PDPN-202ENST00000376057 TELO2Q9Y4R8 837 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 COL1A2P08123 1366 aa12.22□□□□□ -0.45
PDPN-202ENST00000376057 MGAMO43451 1857 aa12.21□□□□□ -0.45
PDPN-202ENST00000376057 PMM2O15305 246 aa12.21□□□□□ -0.45
PDPN-202ENST00000376057 TUBB4AP04350 444 aa12.21□□□□□ -0.45
PDPN-202ENST00000376057 HNRNPH3P31942 346 aaKnown RBP12.21□□□□□ -0.45
PDPN-202ENST00000376057 PSMC2P35998 433 aaKnown RBP12.21□□□□□ -0.45
PDPN-202ENST00000376057 NPTX2P47972 431 aa12.21□□□□□ -0.45
PDPN-202ENST00000376057 TAF1CQ15572 869 aaPredicted RBP12.21□□□□□ -0.45
PDPN-202ENST00000376057 DPP9Q86TI2 863 aa12.21□□□□□ -0.45
PDPN-202ENST00000376057 SOCS4Q8WXH5 440 aa12.21□□□□□ -0.45
PDPN-202ENST00000376057 CFHR5Q9BXR6 569 aa12.21□□□□□ -0.45
PDPN-202ENST00000376057 GPBP1L1Q9HC44 474 aaPredicted RBP12.21□□□□□ -0.45
PDPN-202ENST00000376057 ARHGAP28Q9P2N2 729 aa12.21□□□□□ -0.45
PDPN-202ENST00000376057 Q9Y3F1 56 aa12.21□□□□□ -0.45
PDPN-202ENST00000376057 K7ENM7 598 aa12.21□□□□□ -0.46
PDPN-202ENST00000376057 KIAA0391O15091 583 aaKnown RBP12.21□□□□□ -0.46
PDPN-202ENST00000376057 PIGRP01833 764 aa12.21□□□□□ -0.46
PDPN-202ENST00000376057 EPB41P11171 864 aaKnown RBP12.21□□□□□ -0.46
PDPN-202ENST00000376057 NAMPTP43490 491 aa12.21□□□□□ -0.46
PDPN-202ENST00000376057 EMC2Q15006 297 aa12.21□□□□□ -0.46
PDPN-202ENST00000376057 DUSP28Q4G0W2 176 aa12.21□□□□□ -0.46
PDPN-202ENST00000376057 WDR78Q5VTH9 848 aa12.21□□□□□ -0.46
PDPN-202ENST00000376057 SPATA33Q96N06 139 aa12.21□□□□□ -0.46
PDPN-202ENST00000376057 TMEM134Q9H6X4 195 aa12.21□□□□□ -0.46
PDPN-202ENST00000376057 TBX20Q9UMR3 447 aa12.21□□□□□ -0.46
PDPN-202ENST00000376057 MCM3APO60318 1980 aa12.21□□□□□ -0.46
PDPN-202ENST00000376057 CCDC40Q4G0X9 1142 aa12.2□□□□□ -0.46
PDPN-202ENST00000376057 ZC2HC1CQ53FD0 456 aaPredicted RBP12.2□□□□□ -0.46
PDPN-202ENST00000376057 FAM102BQ5T8I3 360 aa12.2□□□□□ -0.46
PDPN-202ENST00000376057 TCP11Q8WWU5 503 aa12.2□□□□□ -0.46
PDPN-202ENST00000376057 IFT74Q96LB3 600 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms