RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 SNX12Q9UMY4 172 aa15.26■□□□□ 0.03
MSH5-202ENST00000375740 GJA3Q9Y6H8 435 aa15.26■□□□□ 0.03
MSH5-202ENST00000375740 PDE2AO00408 941 aaPredicted RBP15.26■□□□□ 0.03
MSH5-202ENST00000375740 UCHL3P15374 230 aa15.26■□□□□ 0.03
MSH5-202ENST00000375740 MAP2K2P36507 400 aa15.26■□□□□ 0.03
MSH5-202ENST00000375740 IRAK1P51617 712 aa15.26■□□□□ 0.03
MSH5-202ENST00000375740 GHRHRQ02643 423 aa15.26■□□□□ 0.03
MSH5-202ENST00000375740 ITGB3BPQ13352 177 aaPredicted RBP15.26■□□□□ 0.03
MSH5-202ENST00000375740 PCNX4Q63HM2 1172 aa15.26■□□□□ 0.03
MSH5-202ENST00000375740 NIPA1Q7RTP0 329 aa15.26■□□□□ 0.03
MSH5-202ENST00000375740 PPP1R9AQ9ULJ8 1098 aa15.26■□□□□ 0.03
MSH5-202ENST00000375740 A0A087X0T9 212 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 HIP1RO75146 1068 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 FAM228BP0C875 321 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 VCAM1P19320 739 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 PSMC2P35998 433 aaKnown RBP15.25■□□□□ 0.03
MSH5-202ENST00000375740 SLC18A3Q16572 532 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 GBP6Q6ZN66 633 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 IRF2BP2Q7Z5L9 587 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 CAGE1Q8TC20 777 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 NEK9Q8TD19 979 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 ALS2CR12Q96Q35 445 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 RPAP3Q9H6T3 665 aaPredicted RBP15.25■□□□□ 0.03
MSH5-202ENST00000375740 GINM1Q9NU53 330 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 ADAMTS1Q9UHI8 967 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 SAMM50Q9Y512 469 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 BUB1O43683 1085 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 P4HBP07237 508 aaKnown RBP15.25■□□□□ 0.03
MSH5-202ENST00000375740 EIF2AK2P19525 551 aaKnown RBP15.25■□□□□ 0.03
MSH5-202ENST00000375740 USP14P54578 494 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 RPS6P62753 249 aaKnown RBP15.25■□□□□ 0.03
MSH5-202ENST00000375740 SPP2Q13103 211 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 NFIL3Q16649 462 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 PADI6Q6TGC4 694 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 MAEAQ7L5Y9 396 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 FAM186BQ8IYM0 893 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 SPAG5Q96R06 1193 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 ACBD3Q9H3P7 528 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 CEP83Q9Y592 693 aa15.25■□□□□ 0.03
MSH5-202ENST00000375740 CTDP1Q9Y5B0 961 aaPredicted RBP15.25■□□□□ 0.03
MSH5-202ENST00000375740 NAP1L1P55209 391 aaKnown RBP15.24■□□□□ 0.03
MSH5-202ENST00000375740 MAPK7Q13164 816 aa15.24■□□□□ 0.03
MSH5-202ENST00000375740 STXBP4Q6ZWJ1 553 aa15.24■□□□□ 0.03
MSH5-202ENST00000375740 CREG2Q8IUH2 290 aa15.24■□□□□ 0.03
MSH5-202ENST00000375740 DAW1Q8N136 415 aa15.24■□□□□ 0.03
MSH5-202ENST00000375740 RNF10Q8N5U6 811 aaKnown RBP15.24■□□□□ 0.03
MSH5-202ENST00000375740 FAM212AQ96EL1 285 aa15.24■□□□□ 0.03
MSH5-202ENST00000375740 RPGRIP1Q96KN7 1286 aa15.24■□□□□ 0.03
MSH5-202ENST00000375740 NOX5Q96PH1 765 aa15.24■□□□□ 0.03
MSH5-202ENST00000375740 SIX2Q9NPC8 291 aa15.24■□□□□ 0.03
MSH5-202ENST00000375740 BCS1LQ9Y276 419 aa15.24■□□□□ 0.03
MSH5-202ENST00000375740 ZHX2Q9Y6X8 837 aa15.24■□□□□ 0.03
MSH5-202ENST00000375740 MYH11P35749 1972 aa15.24■□□□□ 0.03
MSH5-202ENST00000375740 SHOX2O60902 331 aaPredicted RBP15.24■□□□□ 0.03
MSH5-202ENST00000375740 ZBED4O75132 1171 aa15.24■□□□□ 0.03
MSH5-202ENST00000375740 MYCLP12524 364 aaPredicted RBP15.24■□□□□ 0.03
MSH5-202ENST00000375740 PRLRP16471 622 aa15.24■□□□□ 0.03
MSH5-202ENST00000375740 MTMR1Q13613 665 aa15.24■□□□□ 0.03
MSH5-202ENST00000375740 PLS1Q14651 629 aa15.24■□□□□ 0.03
MSH5-202ENST00000375740 COG1Q8WTW3 980 aa15.24■□□□□ 0.03
MSH5-202ENST00000375740 MAP3K20Q9NYL2 800 aaKnown RBP15.24■□□□□ 0.03
MSH5-202ENST00000375740 NCK2O43639 380 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 CYP2J2P51589 502 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 PTK2Q05397 1052 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 PGM5Q15124 567 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 HS2ST1Q7LGA3 356 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 RBM46Q8TBY0 533 aaKnown RBP15.23■□□□□ 0.03
MSH5-202ENST00000375740 BCAS4Q8TDM0 211 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 VIPAS39Q9H9C1 493 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 LUC7LQ9NQ29 371 aaKnown RBP15.23■□□□□ 0.03
MSH5-202ENST00000375740 AGPAT3Q9NRZ7 376 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 DMAC2Q9NW81 257 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 AJAP1Q9UKB5 411 aaPredicted RBP15.23■□□□□ 0.03
MSH5-202ENST00000375740 UBE4BO95155 1302 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 EBAG9O00559 213 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 TUBBP07437 444 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 NAB2Q15742 525 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 PRAMEF18Q5VWM3 479 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 NFRKBQ6P4R8 1299 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 GJB7Q6PEY0 223 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 ZNF571Q7Z3V5 609 aaPredicted RBP15.23■□□□□ 0.03
MSH5-202ENST00000375740 FBXO41Q8TF61 875 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 WNK4Q96J92 1243 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 OSBPL9Q96SU4 736 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 STRA6Q9BX79 667 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 GCNT4Q9P109 453 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 SUFUQ9UMX1 484 aa15.23■□□□□ 0.03
MSH5-202ENST00000375740 BRCA1P38398 1863 aaKnown RBP15.23■□□□□ 0.03
MSH5-202ENST00000375740 MYO1FO00160 1098 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 KLRC1P26715 233 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 RNF207Q6ZRF8 634 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 ZKSCAN4Q969J2 545 aaPredicted RBP15.22■□□□□ 0.03
MSH5-202ENST00000375740 PSMB7Q99436 277 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 MKNK1Q9BUB5 465 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 PACSIN1Q9BY11 444 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 LOXHD1Q8IVV2 1947 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 GTPBP10A4D1E9 387 aaKnown RBP15.22■□□□□ 0.03
MSH5-202ENST00000375740 VWA5AO00534 786 aa15.22■□□□□ 0.03
MSH5-202ENST00000375740 PPP1R12BO60237 982 aaPredicted RBP15.22■□□□□ 0.03
MSH5-202ENST00000375740 ATP9AO75110 1047 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms