RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 LUC7L3O95232 432 aaKnown RBP7.04□□□□□ -1.28
SMC1A-202ENST00000375340 CFAP61Q8NHU2 1237 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 VIPAS39Q9H9C1 493 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 RGL1Q9NZL6 768 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 PNMA2Q9UL42 364 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 PVALEFA0A1B0GWK0 134 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 SMIM22K7EJ46 135 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 RWDD2BP57060 319 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 MDM2Q00987 491 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-202ENST00000375340 TBX2Q13207 712 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-202ENST00000375340 PKN1Q16512 942 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 QRICH1Q2TAL8 776 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 EPM2AIP1Q7L775 607 aaPredicted RBP7.04□□□□□ -1.28
SMC1A-202ENST00000375340 SRRM1Q8IYB3 904 aaKnown RBP7.04□□□□□ -1.28
SMC1A-202ENST00000375340 SCYL3Q8IZE3 742 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 CAPN6Q9Y6Q1 641 aa7.04□□□□□ -1.28
SMC1A-202ENST00000375340 A0A0G2JND7 137 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 EIF3BP55884 814 aaKnown RBP7.03□□□□□ -1.28
SMC1A-202ENST00000375340 MTERF2Q49AM1 385 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 LMBRD2Q68DH5 695 aaPredicted RBP7.03□□□□□ -1.28
SMC1A-202ENST00000375340 MCF2L2Q86YR7 1114 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 SCYL1Q96KG9 808 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 SEMA6BQ9H3T3 888 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 SYNGAP1Q96PV0 1343 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 TCP11X1B4DZS4 312 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 TNNC2P02585 160 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 EIF2AK2P19525 551 aaKnown RBP7.03□□□□□ -1.28
SMC1A-202ENST00000375340 KRT17Q04695 432 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 NAB2Q15742 525 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 ZC2HC1CQ53FD0 456 aaPredicted RBP7.03□□□□□ -1.28
SMC1A-202ENST00000375340 DARS2Q6PI48 645 aaKnown RBP7.03□□□□□ -1.28
SMC1A-202ENST00000375340 NIM1KQ8IY84 436 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 ARHGAP24Q8N264 748 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 CCT8L2Q96SF2 557 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 LBHD1Q9BQE6 289 aaPredicted RBP7.03□□□□□ -1.28
SMC1A-202ENST00000375340 GINM1Q9NU53 330 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 SPEF2Q9C093 1822 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 NTSR2O95665 410 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 MSH2P43246 934 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 BBOF1Q8ND07 529 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 MED10Q9BTT4 135 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 MARK3P27448 753 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 CASP7P55210 303 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 CCDC137Q6PK04 289 aaKnown RBP7.03□□□□□ -1.28
SMC1A-202ENST00000375340 ARHGEF18Q6ZSZ5 1173 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 SLC30A5Q8TAD4 765 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 PPP4R1Q8TF05 950 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 BTBD6Q96KE9 485 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 CEP170P1Q96L14 293 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 SH2D3AQ9BRG2 576 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 ALG13Q9NP73 1137 aaKnown RBP7.03□□□□□ -1.28
SMC1A-202ENST00000375340 INTS13Q9NVM9 706 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 TOM1L1O75674 476 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 APBA3O96018 575 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 LSP1P33241 339 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 MRPS9P82933 396 aaKnown RBP7.03□□□□□ -1.28
SMC1A-202ENST00000375340 ARHGAP4P98171 946 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 KIF22Q14807 665 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 SDCCAG8Q86SQ7 713 aaPredicted RBP7.03□□□□□ -1.28
SMC1A-202ENST00000375340 LRRD1A4D1F6 860 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 RAD17O75943 681 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 ZNF18P17022 549 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 TPD52P55327 224 aaPredicted RBP7.03□□□□□ -1.28
SMC1A-202ENST00000375340 FOXP4Q8IVH2 680 aaPredicted RBP7.03□□□□□ -1.28
SMC1A-202ENST00000375340 ARL8AQ96BM9 186 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 CCDC97Q96F63 343 aaPredicted RBP7.03□□□□□ -1.28
SMC1A-202ENST00000375340 TMEM206Q9H813 350 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 EMSYQ7Z589 1322 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 INHBAP08476 426 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 NAALADL2Q58DX5 795 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 PADI6Q6TGC4 694 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 CYFIP2Q96F07 1278 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 IWS1Q96ST2 819 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 LXNQ9BS40 222 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 A0A1W2PQJ5 194 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 RASA4BC9J798 803 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 RASA4O43374 803 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 YARSP54577 528 aaKnown RBP7.03□□□□□ -1.28
SMC1A-202ENST00000375340 CORO7P57737 925 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 GPC5P78333 572 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 CDO1Q16878 200 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 MDH1BQ5I0G3 518 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 DNAJC24Q6P3W2 148 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 SUPT20HQ8NEM7 779 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 RAB3IL1Q8TBN0 382 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 ARHGEF1Q92888 912 aaKnown RBP7.03□□□□□ -1.28
SMC1A-202ENST00000375340 CHMP6Q96FZ7 201 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 RIC1Q4ADV7 1423 aa7.03□□□□□ -1.28
SMC1A-202ENST00000375340 ITPK1Q13572 414 aa7.02□□□□□ -1.28
SMC1A-202ENST00000375340 NME8Q8N427 588 aa7.02□□□□□ -1.28
SMC1A-202ENST00000375340 GUF1Q8N442 669 aaKnown RBP7.02□□□□□ -1.28
SMC1A-202ENST00000375340 CFAP57Q96MR6 1250 aa7.02□□□□□ -1.28
SMC1A-202ENST00000375340 SMYD2Q9NRG4 433 aa7.02□□□□□ -1.28
SMC1A-202ENST00000375340 CNOT8Q9UFF9 292 aaKnown RBP7.02□□□□□ -1.28
SMC1A-202ENST00000375340 SLC9A1P19634 815 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 VAMP7P51809 220 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 GRB10Q13322 594 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 PPP1R18Q6NYC8 613 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 SEC16BQ96JE7 1060 aa7.02□□□□□ -1.29
SMC1A-202ENST00000375340 ZNF341Q9BYN7 854 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms