RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 APOA5Q6Q788 366 aa15.99■□□□□ 0.15
PTCH1-202ENST00000375271 C6orf50Q9HD87 102 aa15.99■□□□□ 0.15
PTCH1-202ENST00000375271 DACT1Q9NYF0 836 aa15.99■□□□□ 0.15
PTCH1-202ENST00000375271 GABBR1Q9UBS5 961 aa15.99■□□□□ 0.15
PTCH1-202ENST00000375271 DBR1Q9UK59 544 aaKnown RBP15.99■□□□□ 0.15
PTCH1-202ENST00000375271 PBX3P40426 434 aa15.98■□□□□ 0.15
PTCH1-202ENST00000375271 FAM189BP81408 668 aa15.98■□□□□ 0.15
PTCH1-202ENST00000375271 EFCAB12Q6NXP0 572 aa15.98■□□□□ 0.15
PTCH1-202ENST00000375271 SYCE2Q6PIF2 218 aa15.98■□□□□ 0.15
PTCH1-202ENST00000375271 NLRP7Q8WX94 980 aa15.98■□□□□ 0.15
PTCH1-202ENST00000375271 LSG1Q9H089 658 aaKnown RBP15.98■□□□□ 0.15
PTCH1-202ENST00000375271 S1PR5Q9H228 398 aa15.98■□□□□ 0.15
PTCH1-202ENST00000375271 ADAM7Q9H2U9 754 aa15.98■□□□□ 0.15
PTCH1-202ENST00000375271 NRBP2Q9NSY0 501 aa15.98■□□□□ 0.15
PTCH1-202ENST00000375271 DZANK1Q9NVP4 752 aa15.98■□□□□ 0.15
PTCH1-202ENST00000375271 PCDHA10Q9Y5I2 948 aa15.98■□□□□ 0.15
PTCH1-202ENST00000375271 HCFC2Q9Y5Z7 792 aa15.98■□□□□ 0.15
PTCH1-202ENST00000375271 CCDC196A0A1B0GTZ2 297 aa15.97■□□□□ 0.15
PTCH1-202ENST00000375271 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.97■□□□□ 0.15
PTCH1-202ENST00000375271 GALR2O43603 387 aaPredicted RBP15.97■□□□□ 0.15
PTCH1-202ENST00000375271 EIF4BP23588 611 aaKnown RBP15.97■□□□□ 0.15
PTCH1-202ENST00000375271 METAP2P50579 478 aaKnown RBP eCLIP15.97■□□□□ 0.15
PTCH1-202ENST00000375271 AKAP17AQ02040 695 aaKnown RBP15.97■□□□□ 0.15
PTCH1-202ENST00000375271 ATAT1Q5SQI0 421 aa15.97■□□□□ 0.15
PTCH1-202ENST00000375271 ECHDC2Q86YB7 292 aa15.97■□□□□ 0.15
PTCH1-202ENST00000375271 REXO1Q8N1G1 1221 aaKnown RBP15.97■□□□□ 0.15
PTCH1-202ENST00000375271 PLCD3Q8N3E9 789 aa15.97■□□□□ 0.15
PTCH1-202ENST00000375271 HELQQ8TDG4 1101 aa15.97■□□□□ 0.15
PTCH1-202ENST00000375271 CASD1Q96PB1 797 aa15.97■□□□□ 0.15
PTCH1-202ENST00000375271 ESYT1Q9BSJ8 1104 aa15.97■□□□□ 0.15
PTCH1-202ENST00000375271 USP34Q70CQ2 3546 aa15.97■□□□□ 0.15
PTCH1-202ENST00000375271 KLF18A0A0U1RQI7 1052 aa15.96■□□□□ 0.15
PTCH1-202ENST00000375271 WDR64B1ANS9 1081 aa15.96■□□□□ 0.15
PTCH1-202ENST00000375271 FAM86B1E9PN63 330 aa15.96■□□□□ 0.15
PTCH1-202ENST00000375271 GPR32O75388 356 aa15.96■□□□□ 0.15
PTCH1-202ENST00000375271 EOMESO95936 686 aa15.96■□□□□ 0.15
PTCH1-202ENST00000375271 FAM86B2P0C5J1 330 aa15.96■□□□□ 0.15
PTCH1-202ENST00000375271 RFX1P22670 979 aa15.96■□□□□ 0.15
PTCH1-202ENST00000375271 GNA11P29992 359 aa15.96■□□□□ 0.15
PTCH1-202ENST00000375271 FOXK2Q01167 660 aa15.96■□□□□ 0.15
PTCH1-202ENST00000375271 RNASELQ05823 741 aaKnown RBP15.96■□□□□ 0.15
PTCH1-202ENST00000375271 TBC1D8BQ0IIM8 1120 aa15.96■□□□□ 0.15
PTCH1-202ENST00000375271 GIT2Q14161 759 aa15.96■□□□□ 0.15
PTCH1-202ENST00000375271 DSC3Q14574 896 aa15.96■□□□□ 0.15
PTCH1-202ENST00000375271 PRR16Q569H4 304 aa15.96■□□□□ 0.15
PTCH1-202ENST00000375271 RARS2Q5T160 578 aaKnown RBP15.96■□□□□ 0.15
PTCH1-202ENST00000375271 TYW1BQ6NUM6 668 aa15.96■□□□□ 0.15
PTCH1-202ENST00000375271 LRRC71Q8N4P6 559 aa15.96■□□□□ 0.15
PTCH1-202ENST00000375271 MRPL43Q8N983 215 aaKnown RBP15.96■□□□□ 0.15
PTCH1-202ENST00000375271 BICD2Q8TD16 824 aa15.96■□□□□ 0.15
PTCH1-202ENST00000375271 RSPH1Q8WYR4 309 aa15.96■□□□□ 0.15
PTCH1-202ENST00000375271 ACSF2Q96CM8 615 aaPredicted RBP15.96■□□□□ 0.15
PTCH1-202ENST00000375271 POMKQ9H5K3 350 aa15.96■□□□□ 0.15
PTCH1-202ENST00000375271 MAFBQ9Y5Q3 323 aaPredicted RBP15.96■□□□□ 0.15
PTCH1-202ENST00000375271 ZBTB42B2RXF5 422 aa15.95■□□□□ 0.14
PTCH1-202ENST00000375271 C2CD4DB7Z1M9 353 aa15.95■□□□□ 0.14
PTCH1-202ENST00000375271 ZC3H11AO75152 810 aaKnown RBP eCLIP15.95■□□□□ 0.14
PTCH1-202ENST00000375271 CXCL14O95715 111 aa15.95■□□□□ 0.14
PTCH1-202ENST00000375271 PDGFBP01127 241 aaPredicted RBP15.95■□□□□ 0.14
PTCH1-202ENST00000375271 CLK2P49760 499 aaKnown RBP15.95■□□□□ 0.14
PTCH1-202ENST00000375271 KRT32Q14532 448 aa15.95■□□□□ 0.14
PTCH1-202ENST00000375271 ZNF668Q96K58 619 aaPredicted RBP15.95■□□□□ 0.14
PTCH1-202ENST00000375271 GCOM2Q9BZD3 368 aaPredicted RBP15.95■□□□□ 0.14
PTCH1-202ENST00000375271 C2orf71A6NGG8 1288 aa15.94■□□□□ 0.14
PTCH1-202ENST00000375271 CHMP2AO43633 222 aa15.94■□□□□ 0.14
PTCH1-202ENST00000375271 BRD1O95696 1058 aa15.94■□□□□ 0.14
PTCH1-202ENST00000375271 OATP04181 439 aa15.94■□□□□ 0.14
PTCH1-202ENST00000375271 CYP3A4P08684 503 aa15.94■□□□□ 0.14
PTCH1-202ENST00000375271 SKIP12755 728 aa15.94■□□□□ 0.14
PTCH1-202ENST00000375271 ATP4AP20648 1035 aa15.94■□□□□ 0.14
PTCH1-202ENST00000375271 SFPQP23246 707 aaKnown RBP eCLIP15.94■□□□□ 0.14
PTCH1-202ENST00000375271 DNM2P50570 870 aa15.94■□□□□ 0.14
PTCH1-202ENST00000375271 BCAR1P56945 870 aa15.94■□□□□ 0.14
PTCH1-202ENST00000375271 CDC42EP1Q00587 391 aa15.94■□□□□ 0.14
PTCH1-202ENST00000375271 KCNC3Q14003 757 aa15.94■□□□□ 0.14
PTCH1-202ENST00000375271 NECTIN1Q15223 517 aa15.94■□□□□ 0.14
PTCH1-202ENST00000375271 TWF2Q6IBS0 349 aaKnown RBP15.94■□□□□ 0.14
PTCH1-202ENST00000375271 GLB1LQ6UWU2 654 aa15.94■□□□□ 0.14
PTCH1-202ENST00000375271 LRRC55Q6ZSA7 311 aa15.94■□□□□ 0.14
PTCH1-202ENST00000375271 DHX32Q7L7V1 743 aaKnown RBP15.94■□□□□ 0.14
PTCH1-202ENST00000375271 CABP7Q86V35 215 aa15.94■□□□□ 0.14
PTCH1-202ENST00000375271 VPS52Q8N1B4 723 aa15.94■□□□□ 0.14
PTCH1-202ENST00000375271 SLC39A11Q8N1S5 342 aa15.94■□□□□ 0.14
PTCH1-202ENST00000375271 TCEANC2Q96MN5 208 aa15.94■□□□□ 0.14
PTCH1-202ENST00000375271 IGLV3-22A0A075B6J6 115 aa15.93■□□□□ 0.14
PTCH1-202ENST00000375271 A0A0U1RQF3 1178 aa15.93■□□□□ 0.14
PTCH1-202ENST00000375271 NT5C1B-RDH14C9J2C7 533 aa15.93■□□□□ 0.14
PTCH1-202ENST00000375271 DHX15O43143 795 aaKnown RBP15.93■□□□□ 0.14
PTCH1-202ENST00000375271 GAS7O60861 476 aa15.93■□□□□ 0.14
PTCH1-202ENST00000375271 CLASP2O75122 1294 aaKnown RBP15.93■□□□□ 0.14
PTCH1-202ENST00000375271 HMGB1P09429 215 aaKnown RBP15.93■□□□□ 0.14
PTCH1-202ENST00000375271 DARSP14868 501 aaKnown RBP15.93■□□□□ 0.14
PTCH1-202ENST00000375271 PRKCEQ02156 737 aa15.93■□□□□ 0.14
PTCH1-202ENST00000375271 PFKFB3Q16875 520 aaPredicted RBP15.93■□□□□ 0.14
PTCH1-202ENST00000375271 CLLU1OSQ5K130 101 aa15.93■□□□□ 0.14
PTCH1-202ENST00000375271 ASTLQ6HA08 431 aaPredicted RBP15.93■□□□□ 0.14
PTCH1-202ENST00000375271 KIAA1841Q6NSI8 718 aa15.93■□□□□ 0.14
PTCH1-202ENST00000375271 ELMSAN1Q6PJG2 1045 aa15.93■□□□□ 0.14
PTCH1-202ENST00000375271 PPFIBP1Q86W92 1011 aa15.93■□□□□ 0.14
PTCH1-202ENST00000375271 FLCNQ8NFG4 579 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms