RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 MARCKSP29966 332 aaPredicted RBP23.37■■□□□ 1.33
MAP1LC3A-202ENST00000374837 PBX2P40425 430 aa23.37■■□□□ 1.33
MAP1LC3A-202ENST00000374837 RABGGTBP53611 331 aa23.37■■□□□ 1.33
MAP1LC3A-202ENST00000374837 NFX1Q12986 1120 aaKnown RBP23.37■■□□□ 1.33
MAP1LC3A-202ENST00000374837 KSR1Q8IVT5 923 aa23.37■■□□□ 1.33
MAP1LC3A-202ENST00000374837 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.37■■□□□ 1.33
MAP1LC3A-202ENST00000374837 TCP11Q8WWU5 503 aa23.37■■□□□ 1.33
MAP1LC3A-202ENST00000374837 PRPF31Q8WWY3 499 aaKnown RBP23.37■■□□□ 1.33
MAP1LC3A-202ENST00000374837 NLRP7Q8WX94 980 aa23.37■■□□□ 1.33
MAP1LC3A-202ENST00000374837 AK8Q96MA6 479 aa23.37■■□□□ 1.33
MAP1LC3A-202ENST00000374837 PBX4Q9BYU1 374 aa23.37■■□□□ 1.33
MAP1LC3A-202ENST00000374837 ATP6V0A4Q9HBG4 840 aa23.37■■□□□ 1.33
MAP1LC3A-202ENST00000374837 ERVK-5Q9HDB9 667 aa23.37■■□□□ 1.33
MAP1LC3A-202ENST00000374837 TFIP11Q9UBB9 837 aaKnown RBP23.37■■□□□ 1.33
MAP1LC3A-202ENST00000374837 ST3GAL5Q9UNP4 418 aa23.37■■□□□ 1.33
MAP1LC3A-202ENST00000374837 ENPP3O14638 875 aa23.36■■□□□ 1.33
MAP1LC3A-202ENST00000374837 USO1O60763 962 aaKnown RBP23.36■■□□□ 1.33
MAP1LC3A-202ENST00000374837 EIF4BP23588 611 aaKnown RBP23.36■■□□□ 1.33
MAP1LC3A-202ENST00000374837 SLC39A14Q15043 492 aa23.36■■□□□ 1.33
MAP1LC3A-202ENST00000374837 ZRSR1Q15695 479 aaKnown RBP23.36■■□□□ 1.33
MAP1LC3A-202ENST00000374837 TMCO2Q7Z6W1 182 aaPredicted RBP23.36■■□□□ 1.33
MAP1LC3A-202ENST00000374837 RTN4RL1Q86UN2 441 aaPredicted RBP23.36■■□□□ 1.33
MAP1LC3A-202ENST00000374837 FAM228AQ86W67 206 aa23.36■■□□□ 1.33
MAP1LC3A-202ENST00000374837 HERC6Q8IVU3 1022 aa23.36■■□□□ 1.33
MAP1LC3A-202ENST00000374837 PSPC1Q8WXF1 523 aaKnown RBP23.36■■□□□ 1.33
MAP1LC3A-202ENST00000374837 ZNF396Q96N95 335 aaPredicted RBP23.36■■□□□ 1.33
MAP1LC3A-202ENST00000374837 SCLT1Q96NL6 688 aa23.36■■□□□ 1.33
MAP1LC3A-202ENST00000374837 PNMA5Q96PV4 448 aa23.36■■□□□ 1.33
MAP1LC3A-202ENST00000374837 TMX1Q9H3N1 280 aa23.36■■□□□ 1.33
MAP1LC3A-202ENST00000374837 COL4A3BPQ9Y5P4 624 aa23.36■■□□□ 1.33
MAP1LC3A-202ENST00000374837 A0A087WZ62 844 aa23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 ARHGEF35A5YM69 484 aa23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 E9PMD0 336 aa23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 GPR182O15218 404 aa23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 AMHP03971 560 aa23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 DARSP14868 501 aaKnown RBP23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 LONP1P36776 959 aaKnown RBP23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 NASPP49321 788 aaPredicted RBP23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 LAMTOR4Q0VGL1 99 aa23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 HYIQ5T013 277 aa23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 PADI6Q6TGC4 694 aa23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 CABP7Q86V35 215 aa23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 ZNF410Q86VK4 478 aa23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 FDXACB1Q9BRP7 624 aaPredicted RBP23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 GCOM2Q9BZD3 368 aaPredicted RBP23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 BHMT2Q9H2M3 363 aa23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 FBXO2Q9UK22 296 aaPredicted RBP23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 DNM3Q9UQ16 869 aa23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 SRPRBQ9Y5M8 271 aaKnown RBP23.35■■□□□ 1.33
MAP1LC3A-202ENST00000374837 CSDE1O75534 798 aaKnown RBP23.34■■□□□ 1.33
MAP1LC3A-202ENST00000374837 ARL2P36404 184 aa23.34■■□□□ 1.33
MAP1LC3A-202ENST00000374837 GRB10Q13322 594 aa23.34■■□□□ 1.33
MAP1LC3A-202ENST00000374837 FOXD4L6Q3SYB3 417 aaPredicted RBP23.34■■□□□ 1.33
MAP1LC3A-202ENST00000374837 ODR4Q5SWX8 454 aa23.34■■□□□ 1.33
MAP1LC3A-202ENST00000374837 FOXD4L3Q6VB84 417 aaPredicted RBP23.34■■□□□ 1.33
MAP1LC3A-202ENST00000374837 MAEAQ7L5Y9 396 aa23.34■■□□□ 1.33
MAP1LC3A-202ENST00000374837 KCNK18Q7Z418 384 aa23.34■■□□□ 1.33
MAP1LC3A-202ENST00000374837 MYOCDQ8IZQ8 938 aa23.34■■□□□ 1.33
MAP1LC3A-202ENST00000374837 LINC01599Q8WXQ3 324 aa23.34■■□□□ 1.33
MAP1LC3A-202ENST00000374837 NLRP4Q96MN2 994 aa23.34■■□□□ 1.33
MAP1LC3A-202ENST00000374837 PLIN2Q99541 437 aa23.34■■□□□ 1.33
MAP1LC3A-202ENST00000374837 FTHL17Q9BXU8 183 aa23.34■■□□□ 1.33
MAP1LC3A-202ENST00000374837 MSRAQ9UJ68 235 aa23.34■■□□□ 1.33
MAP1LC3A-202ENST00000374837 YBX2Q9Y2T7 364 aaKnown RBP23.34■■□□□ 1.33
MAP1LC3A-202ENST00000374837 ZDHHC9Q9Y397 364 aa23.34■■□□□ 1.33
MAP1LC3A-202ENST00000374837 MORC2Q9Y6X9 1032 aaPredicted RBP23.34■■□□□ 1.33
MAP1LC3A-202ENST00000374837 ASAP2O43150 1006 aa23.33■■□□□ 1.33
MAP1LC3A-202ENST00000374837 EYA4O95677 639 aa23.33■■□□□ 1.33
MAP1LC3A-202ENST00000374837 BRD1O95696 1058 aa23.33■■□□□ 1.33
MAP1LC3A-202ENST00000374837 SRGAP2CP0DJJ0 459 aa23.33■■□□□ 1.33
MAP1LC3A-202ENST00000374837 MYOGP15173 224 aa23.33■■□□□ 1.33
MAP1LC3A-202ENST00000374837 CYP11B2P19099 503 aa23.33■■□□□ 1.33
MAP1LC3A-202ENST00000374837 DNAJB2P25686 324 aa23.33■■□□□ 1.33
MAP1LC3A-202ENST00000374837 UBA7P41226 1012 aa23.33■■□□□ 1.33
MAP1LC3A-202ENST00000374837 RAB30Q15771 203 aa23.33■■□□□ 1.33
MAP1LC3A-202ENST00000374837 LINC00301Q8NCQ3 95 aa23.33■■□□□ 1.33
MAP1LC3A-202ENST00000374837 CLIC6Q96NY7 704 aa23.33■■□□□ 1.33
MAP1LC3A-202ENST00000374837 CSRNP2Q9H175 543 aa23.33■■□□□ 1.33
MAP1LC3A-202ENST00000374837 DAXXQ9UER7 740 aaPredicted RBP23.33■■□□□ 1.33
MAP1LC3A-202ENST00000374837 PCDHA11Q9Y5I1 949 aa23.33■■□□□ 1.33
MAP1LC3A-202ENST00000374837 EVPLQ92817 2033 aa23.33■■□□□ 1.32
MAP1LC3A-202ENST00000374837 SLC26A4O43511 780 aa23.32■■□□□ 1.32
MAP1LC3A-202ENST00000374837 MGEA5O60502 916 aa23.32■■□□□ 1.32
MAP1LC3A-202ENST00000374837 FGFR4P22455 802 aa23.32■■□□□ 1.32
MAP1LC3A-202ENST00000374837 STK38Q15208 465 aa23.32■■□□□ 1.32
MAP1LC3A-202ENST00000374837 TMEM119Q4V9L6 283 aa23.32■■□□□ 1.32
MAP1LC3A-202ENST00000374837 FAM117BQ6P1L5 589 aa23.32■■□□□ 1.32
MAP1LC3A-202ENST00000374837 MCPH1Q8NEM0 835 aa23.32■■□□□ 1.32
MAP1LC3A-202ENST00000374837 ASAP3Q8TDY4 903 aa23.32■■□□□ 1.32
MAP1LC3A-202ENST00000374837 TOP1MTQ969P6 601 aa23.32■■□□□ 1.32
MAP1LC3A-202ENST00000374837 TIFAQ96CG3 184 aa23.32■■□□□ 1.32
MAP1LC3A-202ENST00000374837 CDK5RAP3Q96JB5 506 aa23.32■■□□□ 1.32
MAP1LC3A-202ENST00000374837 ZBED2Q9BTP6 218 aa23.32■■□□□ 1.32
MAP1LC3A-202ENST00000374837 POLR3FQ9H1D9 316 aaPredicted RBP23.32■■□□□ 1.32
MAP1LC3A-202ENST00000374837 TSPYL2Q9H2G4 693 aaPredicted RBP23.32■■□□□ 1.32
MAP1LC3A-202ENST00000374837 NKX2-4Q9H2Z4 354 aa23.32■■□□□ 1.32
MAP1LC3A-202ENST00000374837 IFT122Q9HBG6 1241 aa23.32■■□□□ 1.32
MAP1LC3A-202ENST00000374837 GPRC5CQ9NQ84 441 aa23.32■■□□□ 1.32
MAP1LC3A-202ENST00000374837 GJB5O95377 273 aa23.31■■□□□ 1.32
MAP1LC3A-202ENST00000374837 MXD4Q14582 209 aaPredicted RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms