RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 ENOSF1Q7L5Y1 443 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 AGR3Q8TD06 166 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 ACAP3Q96P50 834 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 UBE2OQ9C0C9 1292 aaKnown RBP8.58□□□□□ -1.04
USP48-203ENST00000374732 NDEL1Q9GZM8 345 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 WDR6Q9NNW5 1121 aaKnown RBP8.58□□□□□ -1.04
USP48-203ENST00000374732 KCND1Q9NSA2 647 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 MOSPD1Q9UJG1 213 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 DUSP12Q9UNI6 340 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 KIAA0232Q92628 1395 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 SPATA31A3Q5VYP0 1347 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 DDX58O95786 925 aaKnown RBP8.58□□□□□ -1.04
USP48-203ENST00000374732 CYP2E1P05181 493 aaPredicted RBP8.58□□□□□ -1.04
USP48-203ENST00000374732 PDHA1P08559 390 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 GARTP22102 1010 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 PSMA4P25789 261 aaKnown RBP8.58□□□□□ -1.04
USP48-203ENST00000374732 ARFIP1P53367 373 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 SERINC3Q13530 473 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 KIF22Q14807 665 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 MMEL1Q495T6 779 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 KMT5BQ4FZB7 885 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 EAPPQ56P03 285 aaPredicted RBP8.58□□□□□ -1.04
USP48-203ENST00000374732 XKR5Q6UX68 686 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 FAM196AQ6ZSG2 479 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 CBARPQ8N350 705 aaPredicted RBP8.58□□□□□ -1.04
USP48-203ENST00000374732 TOR1AIP2Q8NFQ8 470 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 RUNDC3BQ96NL0 473 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 RIOK1Q9BRS2 568 aaKnown RBP8.58□□□□□ -1.04
USP48-203ENST00000374732 ERP44Q9BS26 406 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 ZWILCHQ9H900 591 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 LIN28AQ9H9Z2 209 aaKnown RBP8.58□□□□□ -1.04
USP48-203ENST00000374732 MBIPQ9NS73 344 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 EMC3Q9P0I2 261 aa8.58□□□□□ -1.04
USP48-203ENST00000374732 CASZ1Q86V15 1759 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 GOLGA6L9A6NEM1 432 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 KRIT1O00522 736 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 TSPAN9O75954 239 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 YEATS4O95619 227 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 GNAT1P11488 350 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 DAB2P98082 770 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 UBXN1Q04323 297 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 RFTN1Q14699 578 aaPredicted RBP8.57□□□□□ -1.04
USP48-203ENST00000374732 STXBP5Q5T5C0 1151 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 NLRP9Q7RTR0 991 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 ZNF845Q96IR2 970 aaPredicted RBP8.57□□□□□ -1.04
USP48-203ENST00000374732 YME1L1Q96TA2 773 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 PRPF18Q99633 342 aaKnown RBP8.57□□□□□ -1.04
USP48-203ENST00000374732 FAM129AQ9BZQ8 928 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 NTN4Q9HB63 628 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 ATP13A1Q9HD20 1204 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 ABCB6Q9NP58 842 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 BATF3Q9NR55 127 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 FARSBQ9NSD9 589 aaKnown RBP8.57□□□□□ -1.04
USP48-203ENST00000374732 PDP2Q9P2J9 529 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 ZNF180Q9UJW8 692 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 CDV3Q9UKY7 258 aaKnown RBP8.57□□□□□ -1.04
USP48-203ENST00000374732 ABCC4O15439 1325 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 PIK3C2AO00443 1686 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 LOC105371267A0A1B0GV96 52 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 H3BRB1 525 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 APEHP13798 732 aaKnown RBP8.57□□□□□ -1.04
USP48-203ENST00000374732 PRKACAP17612 351 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 EVCP57679 992 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 TRPC3Q13507 836 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 WLSQ5T9L3 541 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 TLDC1Q6P9B6 456 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 ITPRIPQ8IWB1 547 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 OR52K2Q8NGK3 314 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 TTC17Q96AE7 1141 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 APOL5Q9BWW9 433 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 USP26Q9BXU7 913 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 CCDC8Q9H0W5 538 aaPredicted RBP8.57□□□□□ -1.04
USP48-203ENST00000374732 TUT1Q9H6E5 874 aaKnown RBP8.57□□□□□ -1.04
USP48-203ENST00000374732 SNTG2Q9NY99 539 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 TEKT2Q9UIF3 430 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 TTC7AQ9ULT0 858 aaPredicted RBP8.57□□□□□ -1.04
USP48-203ENST00000374732 ZBTB1Q9Y2K1 713 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 RGPD8O14715 1765 aaPredicted RBP8.57□□□□□ -1.04
USP48-203ENST00000374732 FLT4P35916 1363 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 FAM208AQ9UK61 1670 aaKnown RBP8.57□□□□□ -1.04
USP48-203ENST00000374732 USP19O94966 1318 aa8.57□□□□□ -1.04
USP48-203ENST00000374732 DDX11L8A8MPP1 907 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 PSMD14O00487 310 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 CDK2AP1O14519 115 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 HAT1O14929 419 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 SLC7A4O43246 635 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 CCNT1O60563 726 aaKnown RBP8.56□□□□□ -1.04
USP48-203ENST00000374732 CPA1P15085 419 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 TARSP26639 723 aaKnown RBP8.56□□□□□ -1.04
USP48-203ENST00000374732 PRKAR1BP31321 381 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 SOX5P35711 763 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 TFAP4Q01664 338 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 MTMR3Q13615 1198 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 MLC1Q15049 377 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 DACT2Q5SW24 774 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 IKBIPQ70UQ0 350 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 NRSN1Q8IZ57 195 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 RFWD2Q8NHY2 731 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 RPGRIP1Q96KN7 1286 aa8.56□□□□□ -1.04
USP48-203ENST00000374732 PLIN2Q99541 437 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms