RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 RUSC1Q9BVN2 902 aa16.68■□□□□ 0.26
HSPG2-201ENST00000374673 TIPINQ9BVW5 301 aa16.68■□□□□ 0.26
HSPG2-201ENST00000374673 PANK2Q9BZ23 570 aa16.68■□□□□ 0.26
HSPG2-201ENST00000374673 CELF4Q9BZC1 486 aaKnown RBP16.68■□□□□ 0.26
HSPG2-201ENST00000374673 CUEDC2Q9H467 287 aa16.68■□□□□ 0.26
HSPG2-201ENST00000374673 SUCLA2Q9P2R7 463 aaPredicted RBP16.68■□□□□ 0.26
HSPG2-201ENST00000374673 KCNH3Q9ULD8 1083 aa16.68■□□□□ 0.26
HSPG2-201ENST00000374673 A0A1B0GVL5 298 aa16.67■□□□□ 0.26
HSPG2-201ENST00000374673 H0YGN5 161 aa16.67■□□□□ 0.26
HSPG2-201ENST00000374673 ASAP2O43150 1006 aa16.67■□□□□ 0.26
HSPG2-201ENST00000374673 GPR32O75388 356 aa16.67■□□□□ 0.26
HSPG2-201ENST00000374673 SSBP05455 408 aaKnown RBP eCLIP16.67■□□□□ 0.26
HSPG2-201ENST00000374673 GUCY2CP25092 1073 aa16.67■□□□□ 0.26
HSPG2-201ENST00000374673 ARL2P36404 184 aa16.67■□□□□ 0.26
HSPG2-201ENST00000374673 GPC3P51654 580 aa16.67■□□□□ 0.26
HSPG2-201ENST00000374673 TMEM62Q0P6H9 643 aa16.67■□□□□ 0.26
HSPG2-201ENST00000374673 MBTPS1Q14703 1052 aa16.67■□□□□ 0.26
HSPG2-201ENST00000374673 ZNF410Q86VK4 478 aa16.67■□□□□ 0.26
HSPG2-201ENST00000374673 IQUBQ8NA54 791 aa16.67■□□□□ 0.26
HSPG2-201ENST00000374673 MRPS27Q92552 414 aaKnown RBP16.67■□□□□ 0.26
HSPG2-201ENST00000374673 LBHD1Q9BQE6 289 aaPredicted RBP16.67■□□□□ 0.26
HSPG2-201ENST00000374673 PCDH10Q9P2E7 1040 aa16.67■□□□□ 0.26
HSPG2-201ENST00000374673 COL4A3BPQ9Y5P4 624 aa16.67■□□□□ 0.26
HSPG2-201ENST00000374673 SQORQ9Y6N5 450 aa16.67■□□□□ 0.26
HSPG2-201ENST00000374673 GOLGA6L4A6NEF3 574 aa16.66■□□□□ 0.26
HSPG2-201ENST00000374673 POLR2DO15514 142 aaKnown RBP16.66■□□□□ 0.26
HSPG2-201ENST00000374673 CXCL10P02778 98 aa16.66■□□□□ 0.26
HSPG2-201ENST00000374673 CSF2RAP15509 400 aa16.66■□□□□ 0.26
HSPG2-201ENST00000374673 CRYBB1P53674 252 aaPredicted RBP16.66■□□□□ 0.26
HSPG2-201ENST00000374673 NLRP11P59045 1033 aaKnown RBP16.66■□□□□ 0.26
HSPG2-201ENST00000374673 FPGSQ05932 587 aa16.66■□□□□ 0.26
HSPG2-201ENST00000374673 PPIGQ13427 754 aaKnown RBP eCLIP16.66■□□□□ 0.263e-9■□□□□ 8.1
HSPG2-201ENST00000374673 MXD4Q14582 209 aaPredicted RBP16.66■□□□□ 0.26
HSPG2-201ENST00000374673 GPNMBQ14956 572 aa16.66■□□□□ 0.26
HSPG2-201ENST00000374673 SV2BQ7L1I2 683 aa16.66■□□□□ 0.26
HSPG2-201ENST00000374673 GPBP1Q86WP2 473 aa16.66■□□□□ 0.26
HSPG2-201ENST00000374673 RHPN2Q8IUC4 686 aa16.66■□□□□ 0.26
HSPG2-201ENST00000374673 FSIP1Q8NA03 581 aa16.66■□□□□ 0.26
HSPG2-201ENST00000374673 PRPF31Q8WWY3 499 aaKnown RBP16.66■□□□□ 0.26
HSPG2-201ENST00000374673 KIFAP3Q92845 792 aa16.66■□□□□ 0.26
HSPG2-201ENST00000374673 DHX58Q96C10 678 aa16.66■□□□□ 0.26
HSPG2-201ENST00000374673 POLR3FQ9H1D9 316 aaPredicted RBP16.66■□□□□ 0.26
HSPG2-201ENST00000374673 ADAMTS10Q9H324 1103 aa16.66■□□□□ 0.26
HSPG2-201ENST00000374673 MAGEF1Q9HAY2 307 aa16.66■□□□□ 0.26
HSPG2-201ENST00000374673 GPRC5CQ9NQ84 441 aa16.66■□□□□ 0.26
HSPG2-201ENST00000374673 NBNO60934 754 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 PFKMP08237 780 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 GLRA2P23416 452 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 MAGEA10P43363 369 aaPredicted RBP16.65■□□□□ 0.26
HSPG2-201ENST00000374673 NDUFA8P51970 172 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 MDM2Q00987 491 aaPredicted RBP16.65■□□□□ 0.26
HSPG2-201ENST00000374673 LAMTOR4Q0VGL1 99 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 MAPK7Q13164 816 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 DHX8Q14562 1220 aaKnown RBP16.65■□□□□ 0.26
HSPG2-201ENST00000374673 KIZQ2M2Z5 673 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 ARSHQ5FYA8 562 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 FBXO47Q5MNV8 452 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 FAM102BQ5T8I3 360 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 MAEAQ7L5Y9 396 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 TET1Q8NFU7 2136 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 ASAP3Q8TDY4 903 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 PPP1R16BQ96T49 567 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 TNMDQ9H2S6 317 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 GOLPH3LQ9H4A5 285 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 CDHR5Q9HBB8 845 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 IL23AQ9NPF7 189 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 KBTBD4Q9NVX7 518 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 USP25Q9UHP3 1055 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 ODF2LQ9ULJ1 636 aa16.65■□□□□ 0.26
HSPG2-201ENST00000374673 A0A087WZ62 844 aa16.64■□□□□ 0.25
HSPG2-201ENST00000374673 HIP1RO75146 1068 aa16.64■□□□□ 0.25
HSPG2-201ENST00000374673 SYKP43405 635 aa16.64■□□□□ 0.25
HSPG2-201ENST00000374673 POU5F1BQ06416 359 aa16.64■□□□□ 0.25
HSPG2-201ENST00000374673 KSR1Q8IVT5 923 aa16.64■□□□□ 0.25
HSPG2-201ENST00000374673 RPUSD2Q8IZ73 545 aaKnown RBP16.64■□□□□ 0.25
HSPG2-201ENST00000374673 DAW1Q8N136 415 aa16.64■□□□□ 0.25
HSPG2-201ENST00000374673 USP38Q8NB14 1042 aa16.64■□□□□ 0.25
HSPG2-201ENST00000374673 TMEM40Q8WWA1 233 aa16.64■□□□□ 0.25
HSPG2-201ENST00000374673 NLRP7Q8WX94 980 aa16.64■□□□□ 0.25
HSPG2-201ENST00000374673 VWCEQ96DN2 955 aa16.64■□□□□ 0.25
HSPG2-201ENST00000374673 DRC1Q96MC2 740 aa16.64■□□□□ 0.25
HSPG2-201ENST00000374673 GBP4Q96PP9 640 aa16.64■□□□□ 0.25
HSPG2-201ENST00000374673 OSMRQ99650 979 aa16.64■□□□□ 0.25
HSPG2-201ENST00000374673 GDF15Q99988 308 aa16.64■□□□□ 0.25
HSPG2-201ENST00000374673 FDXACB1Q9BRP7 624 aaPredicted RBP16.64■□□□□ 0.25
HSPG2-201ENST00000374673 OSBPL7Q9BZF2 842 aa16.64■□□□□ 0.25
HSPG2-201ENST00000374673 GINS2Q9Y248 185 aa16.64■□□□□ 0.25
HSPG2-201ENST00000374673 PDE4DIPQ5VU43 2346 aa16.63■□□□□ 0.25
HSPG2-201ENST00000374673 ACTN4O43707 911 aaKnown RBP16.63■□□□□ 0.25
HSPG2-201ENST00000374673 GHRP10912 638 aa16.63■□□□□ 0.25
HSPG2-201ENST00000374673 CAPSQ13938 189 aa16.63■□□□□ 0.25
HSPG2-201ENST00000374673 GIT2Q14161 759 aa16.63■□□□□ 0.25
HSPG2-201ENST00000374673 TFDP1Q14186 410 aa16.63■□□□□ 0.25
HSPG2-201ENST00000374673 LPIN1Q14693 890 aa16.63■□□□□ 0.25
HSPG2-201ENST00000374673 PPP2R5AQ15172 486 aa16.63■□□□□ 0.25
HSPG2-201ENST00000374673 TSHZ1Q6ZSZ6 1077 aa16.63■□□□□ 0.25
HSPG2-201ENST00000374673 DEFB128Q7Z7B8 93 aa16.63■□□□□ 0.25
HSPG2-201ENST00000374673 IFNLR1Q8IU57 520 aaPredicted RBP16.63■□□□□ 0.25
HSPG2-201ENST00000374673 RNF149Q8NC42 400 aa16.63■□□□□ 0.25
HSPG2-201ENST00000374673 BSNDQ8WZ55 320 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms