RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 ZNF335Q9H4Z2 1342 aaPredicted RBP18.7■□□□□ 0.58
PTPRU-202ENST00000373779 ABCD1P33897 745 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 CACNB3P54284 484 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 SEC23AQ15436 765 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 ZNF449Q6P9G9 518 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 MORC4Q8TE76 937 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 EIF2AK1Q9BQI3 630 aaKnown RBP18.7■□□□□ 0.58
PTPRU-202ENST00000373779 WNT8AQ9H1J5 351 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 TTI1O43156 1089 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 MT-ND3P03897 115 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 TRIM49P0CI25 452 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 TRIM49CP0CI26 452 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 VAMP7P51809 220 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 ZNF746Q6NUN9 644 aaPredicted RBP18.7■□□□□ 0.58
PTPRU-202ENST00000373779 CENPUQ71F23 418 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 RNF34Q969K3 372 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 NRBP2Q9NSY0 501 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 GGPS1O95749 300 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 FAM182BQ5T319 152 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 MAP7D3Q8IWC1 876 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 TRIM42Q8IWZ5 723 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 FBXO41Q8TF61 875 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 SYN2Q92777 582 aaPredicted RBP18.7■□□□□ 0.58
PTPRU-202ENST00000373779 BCAP29Q9UHQ4 241 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 SCINQ9Y6U3 715 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 GOLGA8SH3BPF8 625 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 CRKP46108 304 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 TUBB6Q9BUF5 446 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 SAYSD1Q9NPB0 183 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 ZNF446Q9NWS9 450 aa18.7■□□□□ 0.58
PTPRU-202ENST00000373779 RASA1P20936 1047 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 FXR2P51116 673 aaKnown RBP eCLIP18.69■□□□□ 0.58
PTPRU-202ENST00000373779 GPSM2P81274 684 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 SPARCL1Q14515 664 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 USP38Q8NB14 1042 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 CNKSR1Q969H4 720 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 MTMR4Q9NYA4 1195 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 MAD2L2Q9UI95 211 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 TCRBV5S4A2TA0A5A2 114 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 RASA4BC9J798 803 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 MCF2LO15068 1137 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 RASA4O43374 803 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 TTI2Q6NXR4 508 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 TTC16Q8NEE8 873 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 TRIM6Q9C030 488 aaPredicted RBP18.69■□□□□ 0.58
PTPRU-202ENST00000373779 DUSP10Q9Y6W6 482 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 GEN1Q17RS7 908 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 FBXO33Q7Z6M2 555 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 METTL13Q8N6R0 699 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 SLC7A3Q8WY07 619 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 STK32BQ9NY57 414 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 DCTN3O75935 186 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 SASH3O75995 380 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 KLRC1P26715 233 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 YARSP54577 528 aaKnown RBP18.69■□□□□ 0.58
PTPRU-202ENST00000373779 RCN2Q14257 317 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 EDRF1Q3B7T1 1238 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 RAB21Q9UL25 225 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 SSX2IPQ9Y2D8 614 aa18.69■□□□□ 0.58
PTPRU-202ENST00000373779 FAM196BA6NMK8 535 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 EYA4O95677 639 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 BASP1P80723 227 aaKnown RBP18.68■□□□□ 0.58
PTPRU-202ENST00000373779 BYSLQ13895 437 aaKnown RBP18.68■□□□□ 0.58
PTPRU-202ENST00000373779 SRRM1Q8IYB3 904 aaKnown RBP18.68■□□□□ 0.58
PTPRU-202ENST00000373779 SMC1BQ8NDV3 1235 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 RAB3IL1Q8TBN0 382 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 EHD2Q9NZN4 543 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 FLT1P17948 1338 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 PKN1Q16512 942 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 PDCD7Q8N8D1 485 aaKnown RBP18.68■□□□□ 0.58
PTPRU-202ENST00000373779 FLAD1Q8NFF5 587 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 HEMGNQ9BXL5 484 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 FGFR2P21802 821 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 CDK17Q00537 523 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 ZNF543Q08ER8 600 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 TRIM51Q9BSJ1 452 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 WDR91A4D1P6 747 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 ZNF233A6NK53 670 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 GALCP54803 685 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 FIGNQ5HY92 759 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 SEPT14Q6ZU15 432 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 FAM47EQ6ZV65 393 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 OR2W6PQ8NHA6 318 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 MLXIPLQ9NP71 852 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 OPHN1O60890 802 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 AGBL2Q5U5Z8 902 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 EPM2AIP1Q7L775 607 aaPredicted RBP18.68■□□□□ 0.58
PTPRU-202ENST00000373779 SLC35G2Q8TBE7 412 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 AGPAT1Q99943 283 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 ISCUQ9H1K1 167 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 CAPN6Q9Y6Q1 641 aa18.68■□□□□ 0.58
PTPRU-202ENST00000373779 COL9A3Q14050 684 aaPredicted RBP18.67■□□□□ 0.58
PTPRU-202ENST00000373779 KIAA1755Q5JYT7 1200 aa18.67■□□□□ 0.58
PTPRU-202ENST00000373779 C16orf86Q6ZW13 317 aa18.67■□□□□ 0.58
PTPRU-202ENST00000373779 KBTBD4Q9NVX7 518 aa18.67■□□□□ 0.58
PTPRU-202ENST00000373779 MIS18BP1Q6P0N0 1132 aa18.67■□□□□ 0.58
PTPRU-202ENST00000373779 PYROXD1Q8WU10 500 aa18.67■□□□□ 0.58
PTPRU-202ENST00000373779 LACRTQ9GZZ8 138 aa18.67■□□□□ 0.58
PTPRU-202ENST00000373779 PABPN1LA6NDY0 278 aaKnown RBP18.67■□□□□ 0.58
PTPRU-202ENST00000373779 CFAP73A6NFT4 308 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms